RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 ZNF75DP51815 510 aa28.04■■■□□ 2.08
CCM2-211ENST00000478582 KLHL30Q0D2K2 578 aa28.04■■■□□ 2.08
CCM2-211ENST00000478582 ARID5BQ14865 1188 aa28.04■■■□□ 2.08
CCM2-211ENST00000478582 CLEC16AQ2KHT3 1053 aa28.04■■■□□ 2.08
CCM2-211ENST00000478582 C10orf120Q5SQS8 335 aa28.04■■■□□ 2.08
CCM2-211ENST00000478582 NAA35Q5VZE5 725 aa28.04■■■□□ 2.08
CCM2-211ENST00000478582 MSANTD4Q8NCY6 345 aa28.04■■■□□ 2.08
CCM2-211ENST00000478582 OLIG1Q8TAK6 271 aa28.04■■■□□ 2.08
CCM2-211ENST00000478582 SH3RF2Q8TEC5 729 aa28.04■■■□□ 2.08
CCM2-211ENST00000478582 CPA5Q8WXQ8 436 aa28.04■■■□□ 2.08
CCM2-211ENST00000478582 GOLGA1Q92805 767 aa28.04■■■□□ 2.08
CCM2-211ENST00000478582 C18orf8Q96DM3 657 aa28.04■■■□□ 2.08
CCM2-211ENST00000478582 DDX23Q9BUQ8 820 aaKnown RBP28.04■■■□□ 2.08
CCM2-211ENST00000478582 TRIM62Q9BVG3 475 aa28.04■■■□□ 2.08
CCM2-211ENST00000478582 KLF16Q9BXK1 252 aaPredicted RBP28.04■■■□□ 2.08
CCM2-211ENST00000478582 NACA2Q9H009 215 aa28.04■■■□□ 2.08
CCM2-211ENST00000478582 ASNSD1Q9NWL6 643 aa28.04■■■□□ 2.08
CCM2-211ENST00000478582 THG1LQ9NWX6 298 aaKnown RBP28.04■■■□□ 2.08
CCM2-211ENST00000478582 SIT1Q9Y3P8 196 aa28.04■■■□□ 2.08
CCM2-211ENST00000478582 BZW2Q9Y6E2 419 aaKnown RBP28.04■■■□□ 2.08
CCM2-211ENST00000478582 LEFTY2O00292 366 aa28.03■■■□□ 2.08
CCM2-211ENST00000478582 CHADO15335 359 aa28.03■■■□□ 2.08
CCM2-211ENST00000478582 GLI1P08151 1106 aa28.03■■■□□ 2.08
CCM2-211ENST00000478582 HNRNPH3P31942 346 aaKnown RBP28.03■■■□□ 2.08
CCM2-211ENST00000478582 CENPCQ03188 943 aa28.03■■■□□ 2.08
CCM2-211ENST00000478582 ARHGAP29Q52LW3 1261 aa28.03■■■□□ 2.08
CCM2-211ENST00000478582 HGSNATQ68CP4 663 aa28.03■■■□□ 2.08
CCM2-211ENST00000478582 YAF2Q8IY57 180 aa28.03■■■□□ 2.08
CCM2-211ENST00000478582 CCDC105Q8IYK2 499 aa28.03■■■□□ 2.08
CCM2-211ENST00000478582 RIN3Q8TB24 985 aa28.03■■■□□ 2.08
CCM2-211ENST00000478582 IRF7Q92985 503 aa28.03■■■□□ 2.08
CCM2-211ENST00000478582 SYNCQ9H7C4 482 aa28.03■■■□□ 2.08
CCM2-211ENST00000478582 TRPV5Q9NQA5 729 aa28.03■■■□□ 2.08
CCM2-211ENST00000478582 NUDT5Q9UKK9 219 aa28.03■■■□□ 2.08
CCM2-211ENST00000478582 KANSL1LA0AUZ9 987 aa28.02■■■□□ 2.08
CCM2-211ENST00000478582 TNFAIP3P21580 790 aa28.02■■■□□ 2.08
CCM2-211ENST00000478582 MMP8P22894 467 aa28.02■■■□□ 2.08
CCM2-211ENST00000478582 GDI1P31150 447 aa28.02■■■□□ 2.08
CCM2-211ENST00000478582 TBX2Q13207 712 aaPredicted RBP28.02■■■□□ 2.08
CCM2-211ENST00000478582 EFHC1Q5JVL4 640 aa28.02■■■□□ 2.08
CCM2-211ENST00000478582 MSANTD2Q6P1R3 559 aa28.02■■■□□ 2.08
CCM2-211ENST00000478582 OLFML1Q6UWY5 402 aa28.02■■■□□ 2.08
CCM2-211ENST00000478582 ZNF571Q7Z3V5 609 aaPredicted RBP28.02■■■□□ 2.08
CCM2-211ENST00000478582 DTWD2Q8NBA8 298 aa28.02■■■□□ 2.08
CCM2-211ENST00000478582 SMPD4Q9NXE4 827 aa28.02■■■□□ 2.08
CCM2-211ENST00000478582 H0Y858 1186 aa28.01■■■□□ 2.07
CCM2-211ENST00000478582 ZNF263O14978 683 aa28.01■■■□□ 2.07
CCM2-211ENST00000478582 FYNP06241 537 aa28.01■■■□□ 2.07
CCM2-211ENST00000478582 TPM1P09493 284 aa28.01■■■□□ 2.07
CCM2-211ENST00000478582 SCNN1AP37088 669 aa28.01■■■□□ 2.07
CCM2-211ENST00000478582 YWHAZP63104 245 aaKnown RBP28.01■■■□□ 2.07
CCM2-211ENST00000478582 SLC6A3Q01959 620 aa28.01■■■□□ 2.07
CCM2-211ENST00000478582 MTF1Q14872 753 aa28.01■■■□□ 2.07
CCM2-211ENST00000478582 OR6B2Q6IFH4 312 aa28.01■■■□□ 2.07
CCM2-211ENST00000478582 TOGARAM2Q6ZUX3 1019 aa28.01■■■□□ 2.07
CCM2-211ENST00000478582 FAM183BPQ6ZVS7 135 aa28.01■■■□□ 2.07
CCM2-211ENST00000478582 RSRC2Q7L4I2 434 aaKnown RBP28.01■■■□□ 2.07
CCM2-211ENST00000478582 PHF13Q86YI8 300 aaPredicted RBP28.01■■■□□ 2.07
CCM2-211ENST00000478582 DRC7Q8IY82 874 aa28.01■■■□□ 2.07
CCM2-211ENST00000478582 PJA1Q8NG27 643 aa28.01■■■□□ 2.07
CCM2-211ENST00000478582 RNF139Q8WU17 664 aa28.01■■■□□ 2.07
CCM2-211ENST00000478582 EDEM1Q92611 657 aa28.01■■■□□ 2.07
CCM2-211ENST00000478582 DNAJC7Q99615 494 aa28.01■■■□□ 2.07
CCM2-211ENST00000478582 FOXQ1Q9C009 403 aa28.01■■■□□ 2.07
CCM2-211ENST00000478582 HEBP1Q9NRV9 189 aa28.01■■■□□ 2.07
CCM2-211ENST00000478582 HELZP42694 1942 aaKnown RBP28■■■□□ 2.07
CCM2-211ENST00000478582 SERPING1P05155 500 aa28■■■□□ 2.07
CCM2-211ENST00000478582 SKILP12757 684 aa28■■■□□ 2.07
CCM2-211ENST00000478582 NSFP46459 744 aaKnown RBP28■■■□□ 2.07
CCM2-211ENST00000478582 EFEMP1Q12805 493 aa28■■■□□ 2.07
CCM2-211ENST00000478582 TMC6Q7Z403 805 aa28■■■□□ 2.07
CCM2-211ENST00000478582 XYLT1Q86Y38 959 aa28■■■□□ 2.07
CCM2-211ENST00000478582 OR8K1Q8NGG5 319 aa28■■■□□ 2.07
CCM2-211ENST00000478582 FAM149B1Q96BN6 582 aa28■■■□□ 2.07
CCM2-211ENST00000478582 PIWIL1Q96J94 861 aaKnown RBP28■■■□□ 2.07
CCM2-211ENST00000478582 FAM83CQ9BQN1 747 aa28■■■□□ 2.07
CCM2-211ENST00000478582 POPDC2Q9HBU9 364 aa28■■■□□ 2.07
CCM2-211ENST00000478582 GKN1Q9NS71 199 aa28■■■□□ 2.07
CCM2-211ENST00000478582 SEPT11Q9NVA2 429 aaKnown RBP28■■■□□ 2.07
CCM2-211ENST00000478582 MARCH2Q9P0N8 246 aa28■■■□□ 2.07
CCM2-211ENST00000478582 E2F8A0AVK6 867 aa27.99■■■□□ 2.07
CCM2-211ENST00000478582 ARNTLO00327 626 aa27.99■■■□□ 2.07
CCM2-211ENST00000478582 MDM4O15151 490 aa27.99■■■□□ 2.07
CCM2-211ENST00000478582 COG7P83436 770 aa27.99■■■□□ 2.07
CCM2-211ENST00000478582 PPP1R2P3Q6NXS1 205 aa27.99■■■□□ 2.07
CCM2-211ENST00000478582 CC2D1AQ6P1N0 951 aaPredicted RBP27.99■■■□□ 2.07
CCM2-211ENST00000478582 TPRG1Q6ZUI0 275 aa27.99■■■□□ 2.07
CCM2-211ENST00000478582 SLC26A9Q7LBE3 791 aa27.99■■■□□ 2.07
CCM2-211ENST00000478582 SLC30A5Q8TAD4 765 aa27.99■■■□□ 2.07
CCM2-211ENST00000478582 OSBPL6Q9BZF3 934 aa27.99■■■□□ 2.07
CCM2-211ENST00000478582 DLGAP2Q9P1A6 1054 aa27.99■■■□□ 2.07
CCM2-211ENST00000478582 CFAP97Q9P2B7 532 aa27.99■■■□□ 2.07
CCM2-211ENST00000478582 STRIP2Q9ULQ0 834 aa27.99■■■□□ 2.07
CCM2-211ENST00000478582 HSF2BPO75031 334 aa27.98■■■□□ 2.07
CCM2-211ENST00000478582 DCNP07585 359 aaKnown RBP27.98■■■□□ 2.07
CCM2-211ENST00000478582 NCAM1P13591 858 aa27.98■■■□□ 2.07
CCM2-211ENST00000478582 HOXD11P31277 338 aaPredicted RBP27.98■■■□□ 2.07
CCM2-211ENST00000478582 GOLGA8FQ08AF8 430 aa27.98■■■□□ 2.07
CCM2-211ENST00000478582 GOLGA8DPQ0D2H9 430 aa27.98■■■□□ 2.07
CCM2-211ENST00000478582 PTP4A2Q12974 167 aa27.98■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms