RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 CPLX3Q8WVH0 158 aa7.22□□□□□ -1.25
BRCA1-215ENST00000478531 BAP1Q92560 729 aa7.22□□□□□ -1.25
BRCA1-215ENST00000478531 ATP2A3Q93084 1043 aa7.22□□□□□ -1.25
BRCA1-215ENST00000478531 WBP2Q969T9 261 aa7.22□□□□□ -1.25
BRCA1-215ENST00000478531 PKNOX2Q96KN3 472 aa7.22□□□□□ -1.25
BRCA1-215ENST00000478531 SLC4A5Q9BY07 1137 aa7.22□□□□□ -1.25
BRCA1-215ENST00000478531 LHX5Q9H2C1 402 aa7.22□□□□□ -1.25
BRCA1-215ENST00000478531 HPS4Q9NQG7 708 aa7.22□□□□□ -1.25
BRCA1-215ENST00000478531 ABCC13Q9NSE7 274 aa7.22□□□□□ -1.25
BRCA1-215ENST00000478531 MARCH2Q9P0N8 246 aa7.22□□□□□ -1.25
BRCA1-215ENST00000478531 SFMBT1Q9UHJ3 866 aa7.22□□□□□ -1.25
BRCA1-215ENST00000478531 LSM7Q9UK45 103 aaKnown RBP7.22□□□□□ -1.25
BRCA1-215ENST00000478531 STRIP2Q9ULQ0 834 aa7.22□□□□□ -1.25
BRCA1-215ENST00000478531 NDRG2Q9UN36 371 aaKnown RBP7.22□□□□□ -1.25
BRCA1-215ENST00000478531 CACNA1HO95180 2353 aa7.22□□□□□ -1.25
BRCA1-215ENST00000478531 SLC12A8A0AV02 714 aa7.21□□□□□ -1.26
BRCA1-215ENST00000478531 OTOL1A6NHN0 477 aaPredicted RBP7.21□□□□□ -1.26
BRCA1-215ENST00000478531 PRR33A8MZF0 331 aa7.21□□□□□ -1.26
BRCA1-215ENST00000478531 CAPN9O14815 690 aa7.21□□□□□ -1.26
BRCA1-215ENST00000478531 SART1O43290 800 aaKnown RBP7.21□□□□□ -1.26
BRCA1-215ENST00000478531 LSM8O95777 96 aaKnown RBP7.21□□□□□ -1.26
BRCA1-215ENST00000478531 TCF3P15923 654 aa7.21□□□□□ -1.26
BRCA1-215ENST00000478531 FERP16591 822 aa7.21□□□□□ -1.26
BRCA1-215ENST00000478531 CHRNB2P17787 502 aa7.21□□□□□ -1.26
BRCA1-215ENST00000478531 PBX1P40424 430 aa7.21□□□□□ -1.26
BRCA1-215ENST00000478531 RPL34P49207 117 aaKnown RBP7.21□□□□□ -1.26
BRCA1-215ENST00000478531 NOMO3P69849 1222 aa7.21□□□□□ -1.26
BRCA1-215ENST00000478531 RUNX3Q13761 415 aa7.21□□□□□ -1.26
BRCA1-215ENST00000478531 PDGFRLQ15198 375 aa7.21□□□□□ -1.26
BRCA1-215ENST00000478531 TAF5Q15542 800 aa7.21□□□□□ -1.26
BRCA1-215ENST00000478531 EML3Q32P44 896 aa7.21□□□□□ -1.26
BRCA1-215ENST00000478531 SFMBT2Q5VUG0 894 aa7.21□□□□□ -1.26
BRCA1-215ENST00000478531 E4F1Q66K89 784 aaPredicted RBP7.21□□□□□ -1.26
BRCA1-215ENST00000478531 CWF19L1Q69YN2 538 aaKnown RBP7.21□□□□□ -1.26
BRCA1-215ENST00000478531 KLHDC10Q6PID8 442 aa7.21□□□□□ -1.26
BRCA1-215ENST00000478531 TMEM110Q86TL2 294 aa7.21□□□□□ -1.26
BRCA1-215ENST00000478531 ERICH1Q86X53 443 aa7.21□□□□□ -1.26
BRCA1-215ENST00000478531 ZNF677Q86XU0 584 aa7.21□□□□□ -1.26
BRCA1-215ENST00000478531 BBS7Q8IWZ6 715 aa7.21□□□□□ -1.26
BRCA1-215ENST00000478531 SCML4Q8N228 414 aa7.21□□□□□ -1.26
BRCA1-215ENST00000478531 CPA6Q8N4T0 437 aa7.21□□□□□ -1.26
BRCA1-215ENST00000478531 MSANTD4Q8NCY6 345 aa7.21□□□□□ -1.26
BRCA1-215ENST00000478531 SLC30A5Q8TAD4 765 aa7.21□□□□□ -1.26
BRCA1-215ENST00000478531 ADAM32Q8TC27 787 aa7.21□□□□□ -1.26
BRCA1-215ENST00000478531 IRGQQ8WZA9 623 aa7.21□□□□□ -1.26
BRCA1-215ENST00000478531 SHDQ96IW2 340 aa7.21□□□□□ -1.26
BRCA1-215ENST00000478531 FAM83CQ9BQN1 747 aa7.21□□□□□ -1.26
BRCA1-215ENST00000478531 LRFN3Q9BTN0 628 aa7.21□□□□□ -1.26
BRCA1-215ENST00000478531 KLF16Q9BXK1 252 aaPredicted RBP7.21□□□□□ -1.26
BRCA1-215ENST00000478531 TTYH3Q9C0H2 523 aa7.21□□□□□ -1.26
BRCA1-215ENST00000478531 LINC00597Q9H2U6 94 aa7.21□□□□□ -1.26
BRCA1-215ENST00000478531 OLA1Q9NTK5 396 aaKnown RBP7.21□□□□□ -1.26
BRCA1-215ENST00000478531 NAALADL1Q9UQQ1 740 aa7.21□□□□□ -1.26
BRCA1-215ENST00000478531 CACNA1IQ9P0X4 2223 aa7.21□□□□□ -1.26
BRCA1-215ENST00000478531 SYNJ2BP-COX16A0A087WUM0 186 aa7.2□□□□□ -1.26
BRCA1-215ENST00000478531 E2F8A0AVK6 867 aa7.2□□□□□ -1.26
BRCA1-215ENST00000478531 SPECC1L-ADORA2AF8WAN1 911 aa7.2□□□□□ -1.26
BRCA1-215ENST00000478531 GOLGA8SH3BPF8 625 aa7.2□□□□□ -1.26
BRCA1-215ENST00000478531 STC2O76061 302 aa7.2□□□□□ -1.26
BRCA1-215ENST00000478531 NFATC1O95644 943 aa7.2□□□□□ -1.26
BRCA1-215ENST00000478531 CCDC172P0C7W6 258 aa7.2□□□□□ -1.26
BRCA1-215ENST00000478531 CORO1AP31146 461 aaKnown RBP7.2□□□□□ -1.26
BRCA1-215ENST00000478531 CTHP32929 405 aa7.2□□□□□ -1.26
BRCA1-215ENST00000478531 NSFP46459 744 aaKnown RBP7.2□□□□□ -1.26
BRCA1-215ENST00000478531 VCPP55072 806 aaKnown RBP7.2□□□□□ -1.26
BRCA1-215ENST00000478531 SNX16P57768 344 aa7.2□□□□□ -1.26
BRCA1-215ENST00000478531 RNASE9P60153 205 aaKnown RBP7.2□□□□□ -1.26
BRCA1-215ENST00000478531 PRKCQQ04759 706 aa7.2□□□□□ -1.26
BRCA1-215ENST00000478531 PON2Q15165 354 aa7.2□□□□□ -1.26
BRCA1-215ENST00000478531 SMYD5Q6GMV2 418 aa7.2□□□□□ -1.26
BRCA1-215ENST00000478531 TXNDC11Q6PKC3 985 aa7.2□□□□□ -1.26
BRCA1-215ENST00000478531 OLFML1Q6UWY5 402 aa7.2□□□□□ -1.26
BRCA1-215ENST00000478531 ZNF852Q6ZMS4 543 aa7.2□□□□□ -1.26
BRCA1-215ENST00000478531 MMS22LQ6ZRQ5 1243 aa7.2□□□□□ -1.26
BRCA1-215ENST00000478531 TOGARAM2Q6ZUX3 1019 aa7.2□□□□□ -1.26
BRCA1-215ENST00000478531 PHLDB2Q86SQ0 1253 aa7.2□□□□□ -1.26
BRCA1-215ENST00000478531 FBXL6Q8N531 539 aa7.2□□□□□ -1.26
BRCA1-215ENST00000478531 BHMTQ93088 406 aa7.2□□□□□ -1.26
BRCA1-215ENST00000478531 AGPAT1Q99943 283 aa7.2□□□□□ -1.26
BRCA1-215ENST00000478531 C11orf70Q9BRQ4 267 aa7.2□□□□□ -1.26
BRCA1-215ENST00000478531 RBSNQ9H1K0 784 aa7.2□□□□□ -1.26
BRCA1-215ENST00000478531 ECT2Q9H8V3 914 aa7.2□□□□□ -1.26
BRCA1-215ENST00000478531 POPDC2Q9HBU9 364 aa7.2□□□□□ -1.26
BRCA1-215ENST00000478531 TRPV5Q9NQA5 729 aa7.2□□□□□ -1.26
BRCA1-215ENST00000478531 COX16Q9P0S2 106 aa7.2□□□□□ -1.26
BRCA1-215ENST00000478531 MYO6Q9UM54 1294 aa7.2□□□□□ -1.26
BRCA1-215ENST00000478531 MTF2Q9Y483 593 aaPredicted RBP7.2□□□□□ -1.26
BRCA1-215ENST00000478531 KANSL1LA0AUZ9 987 aa7.2□□□□□ -1.26
BRCA1-215ENST00000478531 SLC9A3R1O14745 358 aaPredicted RBP7.2□□□□□ -1.26
BRCA1-215ENST00000478531 HSF2BPO75031 334 aa7.2□□□□□ -1.26
BRCA1-215ENST00000478531 GYPCP04921 128 aa7.2□□□□□ -1.26
BRCA1-215ENST00000478531 CYP17A1P05093 508 aa7.2□□□□□ -1.26
BRCA1-215ENST00000478531 FYNP06241 537 aa7.2□□□□□ -1.26
BRCA1-215ENST00000478531 DCNP07585 359 aaKnown RBP7.2□□□□□ -1.26
BRCA1-215ENST00000478531 CDH5P33151 784 aaPredicted RBP7.2□□□□□ -1.26
BRCA1-215ENST00000478531 STARD6P59095 220 aa7.2□□□□□ -1.26
BRCA1-215ENST00000478531 YWHAZP63104 245 aaKnown RBP7.2□□□□□ -1.26
BRCA1-215ENST00000478531 COG7P83436 770 aa7.2□□□□□ -1.26
BRCA1-215ENST00000478531 KLHL30Q0D2K2 578 aa7.2□□□□□ -1.26
BRCA1-215ENST00000478531 CLEC16AQ2KHT3 1053 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms