RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 STARD13Q9Y3M8 1113 aa15.2■□□□□ 0.02
SMARCE1-209ENST00000478349 GREB1Q4ZG55 1949 aa15.19■□□□□ 0.02
SMARCE1-209ENST00000478349 A0A1W2PQH9 124 aa15.19■□□□□ 0.02
SMARCE1-209ENST00000478349 NPC1O15118 1278 aa15.19■□□□□ 0.02
SMARCE1-209ENST00000478349 CYBBP04839 570 aa15.19■□□□□ 0.02
SMARCE1-209ENST00000478349 PPP1R2P41236 205 aa15.19■□□□□ 0.02
SMARCE1-209ENST00000478349 FKBP3Q00688 224 aaKnown RBP15.19■□□□□ 0.02
SMARCE1-209ENST00000478349 LRRC63Q05C16 580 aa15.19■□□□□ 0.02
SMARCE1-209ENST00000478349 ZNF394Q53GI3 561 aa15.19■□□□□ 0.02
SMARCE1-209ENST00000478349 DCAF17Q5H9S7 520 aaPredicted RBP15.19■□□□□ 0.02
SMARCE1-209ENST00000478349 LYSMD4Q5XG99 296 aa15.19■□□□□ 0.02
SMARCE1-209ENST00000478349 GPRIN1Q7Z2K8 1008 aa15.19■□□□□ 0.02
SMARCE1-209ENST00000478349 UCMAQ8WVF2 138 aa15.19■□□□□ 0.02
SMARCE1-209ENST00000478349 LSM14BQ9BX40 385 aaKnown RBP15.19■□□□□ 0.02
SMARCE1-209ENST00000478349 GOLPH3LQ9H4A5 285 aa15.19■□□□□ 0.02
SMARCE1-209ENST00000478349 SMOC1Q9H4F8 434 aa15.19■□□□□ 0.02
SMARCE1-209ENST00000478349 CISHQ9NSE2 258 aa15.19■□□□□ 0.02
SMARCE1-209ENST00000478349 HESX1Q9UBX0 185 aa15.19■□□□□ 0.02
SMARCE1-209ENST00000478349 ANGPTL2Q9UKU9 493 aa15.19■□□□□ 0.02
SMARCE1-209ENST00000478349 INVSQ9Y283 1065 aa15.19■□□□□ 0.02
SMARCE1-209ENST00000478349 ANAPC1Q9H1A4 1944 aa15.19■□□□□ 0.02
SMARCE1-209ENST00000478349 LNP1A1A4G5 178 aa15.18■□□□□ 0.02
SMARCE1-209ENST00000478349 HHLA1C9JL84 531 aa15.18■□□□□ 0.02
SMARCE1-209ENST00000478349 GFRA2O00451 464 aa15.18■□□□□ 0.02
SMARCE1-209ENST00000478349 TBX18O95935 607 aa15.18■□□□□ 0.02
SMARCE1-209ENST00000478349 TBXAS1P24557 533 aaPredicted RBP15.18■□□□□ 0.02
SMARCE1-209ENST00000478349 MCCD1P59942 119 aaPredicted RBP15.18■□□□□ 0.02
SMARCE1-209ENST00000478349 CETN1Q12798 172 aa15.18■□□□□ 0.02
SMARCE1-209ENST00000478349 STARD3Q14849 445 aa15.18■□□□□ 0.02
SMARCE1-209ENST00000478349 COBLL1Q53SF7 1204 aa15.18■□□□□ 0.02
SMARCE1-209ENST00000478349 PPP1R26Q5T8A7 1209 aaPredicted RBP15.18■□□□□ 0.02
SMARCE1-209ENST00000478349 ZNF658Q5TYW1 1059 aaPredicted RBP15.18■□□□□ 0.02
SMARCE1-209ENST00000478349 ARHGAP17Q68EM7 881 aa15.18■□□□□ 0.02
SMARCE1-209ENST00000478349 TCEAL6Q6IPX3 200 aa15.18■□□□□ 0.02
SMARCE1-209ENST00000478349 TPGS1Q6ZTW0 290 aa15.18■□□□□ 0.02
SMARCE1-209ENST00000478349 MIB1Q86YT6 1006 aa15.18■□□□□ 0.02
SMARCE1-209ENST00000478349 SYT12Q8IV01 421 aa15.18■□□□□ 0.02
SMARCE1-209ENST00000478349 CEP76Q8TAP6 659 aa15.18■□□□□ 0.02
SMARCE1-209ENST00000478349 PIGKQ92643 395 aa15.18■□□□□ 0.02
SMARCE1-209ENST00000478349 TCEAL3Q969E4 200 aa15.18■□□□□ 0.02
SMARCE1-209ENST00000478349 SMARCE1Q969G3 411 aa15.18■□□□□ 0.02
SMARCE1-209ENST00000478349 CNTNAP3BQ96NU0 1288 aa15.18■□□□□ 0.02
SMARCE1-209ENST00000478349 CNTNAP3Q9BZ76 1288 aa15.18■□□□□ 0.02
SMARCE1-209ENST00000478349 OLA1Q9NTK5 396 aaKnown RBP15.18■□□□□ 0.02
SMARCE1-209ENST00000478349 RASAL2Q9UJF2 1139 aa15.18■□□□□ 0.02
SMARCE1-209ENST00000478349 USP3Q9Y6I4 520 aa15.18■□□□□ 0.02
SMARCE1-209ENST00000478349 PSMA7O14818 248 aa15.17■□□□□ 0.02
SMARCE1-209ENST00000478349 ADAM23O75077 832 aa15.17■□□□□ 0.02
SMARCE1-209ENST00000478349 BCKDHBP21953 392 aa15.17■□□□□ 0.02
SMARCE1-209ENST00000478349 ZNF132P52740 706 aa15.17■□□□□ 0.02
SMARCE1-209ENST00000478349 ATXN3P54252 364 aaPredicted RBP15.17■□□□□ 0.02
SMARCE1-209ENST00000478349 BCAT1P54687 386 aa15.17■□□□□ 0.02
SMARCE1-209ENST00000478349 ZNF445P59923 1031 aa15.17■□□□□ 0.02
SMARCE1-209ENST00000478349 NUCB2P80303 420 aa15.17■□□□□ 0.02
SMARCE1-209ENST00000478349 RPL6Q02878 288 aaKnown RBP15.17■□□□□ 0.02
SMARCE1-209ENST00000478349 MESP2Q0VG99 397 aa15.17■□□□□ 0.02
SMARCE1-209ENST00000478349 TRIM61Q5EBN2 209 aa15.17■□□□□ 0.02
SMARCE1-209ENST00000478349 EMC10Q5UCC4 262 aa15.17■□□□□ 0.02
SMARCE1-209ENST00000478349 ANKRD52Q8NB46 1076 aa15.17■□□□□ 0.02
SMARCE1-209ENST00000478349 CHAMP1Q96JM3 812 aa15.17■□□□□ 0.02
SMARCE1-209ENST00000478349 IPO9Q96P70 1041 aaKnown RBP15.17■□□□□ 0.02
SMARCE1-209ENST00000478349 NMUR1Q9HB89 426 aa15.17■□□□□ 0.02
SMARCE1-209ENST00000478349 METTL14Q9HCE5 456 aaKnown RBP15.17■□□□□ 0.02
SMARCE1-209ENST00000478349 RXFP3Q9NSD7 469 aa15.17■□□□□ 0.02
SMARCE1-209ENST00000478349 OSER1Q9NX31 292 aa15.17■□□□□ 0.02
SMARCE1-209ENST00000478349 ARMCX3Q9UH62 379 aaPredicted RBP15.17■□□□□ 0.02
SMARCE1-209ENST00000478349 DNAH14Q0VDD8 3507 aa15.16■□□□□ 0.02
SMARCE1-209ENST00000478349 C4orf47A7E2U8 309 aa15.16■□□□□ 0.02
SMARCE1-209ENST00000478349 TM4SF5O14894 197 aa15.16■□□□□ 0.02
SMARCE1-209ENST00000478349 GREM1O60565 184 aa15.16■□□□□ 0.02
SMARCE1-209ENST00000478349 STC2O76061 302 aa15.16■□□□□ 0.02
SMARCE1-209ENST00000478349 KCNK5O95279 499 aa15.16■□□□□ 0.02
SMARCE1-209ENST00000478349 NOVA1P51513 510 aaKnown RBP15.16■□□□□ 0.02
SMARCE1-209ENST00000478349 YWHAGP61981 247 aaKnown RBP eCLIP15.16■□□□□ 0.02
SMARCE1-209ENST00000478349 PNOCQ13519 176 aa15.16■□□□□ 0.02
SMARCE1-209ENST00000478349 MAP7D1Q3KQU3 841 aa15.16■□□□□ 0.02
SMARCE1-209ENST00000478349 SGO2Q562F6 1265 aa15.16■□□□□ 0.02
SMARCE1-209ENST00000478349 Q6ZNB5 142 aa15.16■□□□□ 0.02
SMARCE1-209ENST00000478349 SFTPA1Q8IWL2 248 aa15.16■□□□□ 0.02
SMARCE1-209ENST00000478349 SMYD4Q8IYR2 804 aaPredicted RBP15.16■□□□□ 0.02
SMARCE1-209ENST00000478349 SIX6OS1Q8N1H7 587 aa15.16■□□□□ 0.02
SMARCE1-209ENST00000478349 PIP4P2Q8N4L2 257 aa15.16■□□□□ 0.02
SMARCE1-209ENST00000478349 RLN3Q8WXF3 142 aa15.16■□□□□ 0.02
SMARCE1-209ENST00000478349 PLD4Q96BZ4 506 aa15.16■□□□□ 0.02
SMARCE1-209ENST00000478349 GABRG3Q99928 467 aa15.16■□□□□ 0.02
SMARCE1-209ENST00000478349 LRRC4Q9HBW1 653 aa15.16■□□□□ 0.02
SMARCE1-209ENST00000478349 MARCH2Q9P0N8 246 aa15.16■□□□□ 0.02
SMARCE1-209ENST00000478349 CALCOCO1Q9P1Z2 691 aa15.16■□□□□ 0.02
SMARCE1-209ENST00000478349 KIAA1257Q9ULG3 409 aa15.16■□□□□ 0.02
SMARCE1-209ENST00000478349 SPTBN2O15020 2390 aa15.16■□□□□ 0.02
SMARCE1-209ENST00000478349 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.15■□□□□ 0.02
SMARCE1-209ENST00000478349 ZBED1O96006 694 aa15.15■□□□□ 0.02
SMARCE1-209ENST00000478349 SETSIPP0DME0 302 aa15.15■□□□□ 0.02
SMARCE1-209ENST00000478349 CHRM1P11229 460 aaPredicted RBP15.15■□□□□ 0.02
SMARCE1-209ENST00000478349 HNRNPLP14866 589 aaKnown RBP eCLIP15.15■□□□□ 0.023e-11■■□□□ 13.3
SMARCE1-209ENST00000478349 CD19P15391 556 aa15.15■□□□□ 0.02
SMARCE1-209ENST00000478349 CORO1AP31146 461 aaKnown RBP15.15■□□□□ 0.02
SMARCE1-209ENST00000478349 PRCPP42785 496 aa15.15■□□□□ 0.02
SMARCE1-209ENST00000478349 HARS2P49590 506 aaKnown RBP15.15■□□□□ 0.02
SMARCE1-209ENST00000478349 PGFP49763 221 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms