RNA–Protein interactions for RNA: ENST00000478063.2

LMNA-214, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 285 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-214ENST00000478063 NME3Q13232 169 aa13.9□□□□□ -0.18
LMNA-214ENST00000478063 DUSP6Q16828 381 aa13.9□□□□□ -0.18
LMNA-214ENST00000478063 ZFYVE27Q5T4F4 411 aa13.9□□□□□ -0.18
LMNA-214ENST00000478063 OTUD1Q5VV17 481 aaPredicted RBP13.9□□□□□ -0.18
LMNA-214ENST00000478063 STRADAQ7RTN6 431 aa13.9□□□□□ -0.18
LMNA-214ENST00000478063 ARFGAP1Q8N6T3 406 aa13.9□□□□□ -0.18
LMNA-214ENST00000478063 DQX1Q8TE96 717 aaKnown RBP13.9□□□□□ -0.18
LMNA-214ENST00000478063 UBE2Q2Q8WVN8 375 aa13.9□□□□□ -0.18
LMNA-214ENST00000478063 OVCA2Q8WZ82 227 aa13.9□□□□□ -0.18
LMNA-214ENST00000478063 CENPIQ92674 756 aaPredicted RBP13.9□□□□□ -0.18
LMNA-214ENST00000478063 PPP2R3CQ969Q6 453 aa13.9□□□□□ -0.18
LMNA-214ENST00000478063 MRPL38Q96DV4 380 aaKnown RBP13.9□□□□□ -0.18
LMNA-214ENST00000478063 MYRFLQ96LU7 910 aa13.9□□□□□ -0.18
LMNA-214ENST00000478063 ADAM33Q9BZ11 813 aa13.9□□□□□ -0.18
LMNA-214ENST00000478063 ZNF576Q9H609 170 aa13.9□□□□□ -0.18
LMNA-214ENST00000478063 ZWILCHQ9H900 591 aa13.9□□□□□ -0.18
LMNA-214ENST00000478063 DDIT4Q9NX09 232 aa13.9□□□□□ -0.18
LMNA-214ENST00000478063 CLIC5Q9NZA1 410 aa13.9□□□□□ -0.18
LMNA-214ENST00000478063 TRPM5Q9NZQ8 1165 aa13.9□□□□□ -0.18
LMNA-214ENST00000478063 UXTQ9UBK9 157 aaPredicted RBP13.9□□□□□ -0.18
LMNA-214ENST00000478063 DPP7Q9UHL4 492 aa13.9□□□□□ -0.18
LMNA-214ENST00000478063 NUDT5Q9UKK9 219 aa13.9□□□□□ -0.18
LMNA-214ENST00000478063 USP18Q9UMW8 372 aa13.9□□□□□ -0.18
LMNA-214ENST00000478063 PCDHA3Q9Y5H8 950 aa13.9□□□□□ -0.18
LMNA-214ENST00000478063 HCFC2Q9Y5Z7 792 aa13.9□□□□□ -0.18
LMNA-214ENST00000478063 TRIOBPQ9H2D6 2365 aa13.89□□□□□ -0.19
LMNA-214ENST00000478063 NUP210Q8TEM1 1887 aaPredicted RBP13.89□□□□□ -0.19
LMNA-214ENST00000478063 SRGAP2O75044 1071 aa13.89□□□□□ -0.19
LMNA-214ENST00000478063 TRUB2O95900 331 aaKnown RBP13.89□□□□□ -0.19
LMNA-214ENST00000478063 ZDHHC11BP0C7U3 371 aa13.89□□□□□ -0.19
LMNA-214ENST00000478063 RDXP35241 583 aaKnown RBP13.89□□□□□ -0.19
LMNA-214ENST00000478063 ATXN1P54253 815 aaKnown RBP13.89□□□□□ -0.19
LMNA-214ENST00000478063 RWDD2BP57060 319 aa13.89□□□□□ -0.19
LMNA-214ENST00000478063 SLC25A11Q02978 314 aaKnown RBP13.89□□□□□ -0.19
LMNA-214ENST00000478063 SMTNL2Q2TAL5 461 aa13.89□□□□□ -0.19
LMNA-214ENST00000478063 LRIT3Q3SXY7 679 aa13.89□□□□□ -0.19
LMNA-214ENST00000478063 LRRC38Q5VT99 294 aa13.89□□□□□ -0.19
LMNA-214ENST00000478063 RTL10Q7L3V2 364 aa13.89□□□□□ -0.19
LMNA-214ENST00000478063 TAC4Q86UU9 113 aa13.89□□□□□ -0.19
LMNA-214ENST00000478063 HDAC7Q8WUI4 952 aa13.89□□□□□ -0.19
LMNA-214ENST00000478063 ALG3Q92685 438 aa13.89□□□□□ -0.19
LMNA-214ENST00000478063 NT5C3BQ969T7 300 aa13.89□□□□□ -0.19
LMNA-214ENST00000478063 PEBP4Q96S96 227 aa13.89□□□□□ -0.19
LMNA-214ENST00000478063 SMOC2Q9H3U7 446 aa13.89□□□□□ -0.19
LMNA-214ENST00000478063 ZNF334Q9HCZ1 680 aaPredicted RBP13.89□□□□□ -0.19
LMNA-214ENST00000478063 OLA1Q9NTK5 396 aaKnown RBP13.89□□□□□ -0.19
LMNA-214ENST00000478063 KLHL11Q9NVR0 708 aa13.89□□□□□ -0.19
LMNA-214ENST00000478063 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.89□□□□□ -0.19
LMNA-214ENST00000478063 CALCOCO1Q9P1Z2 691 aa13.89□□□□□ -0.19
LMNA-214ENST00000478063 COLQQ9Y215 455 aaPredicted RBP13.89□□□□□ -0.19
LMNA-214ENST00000478063 DOCK4Q8N1I0 1966 aa13.89□□□□□ -0.19
LMNA-214ENST00000478063 RFPL2O75678 378 aa13.88□□□□□ -0.19
LMNA-214ENST00000478063 KRT1P04264 644 aa13.88□□□□□ -0.19
LMNA-214ENST00000478063 KRT7P08729 469 aa13.88□□□□□ -0.19
LMNA-214ENST00000478063 PRLRP16471 622 aa13.88□□□□□ -0.19
LMNA-214ENST00000478063 IL1R2P27930 398 aa13.88□□□□□ -0.19
LMNA-214ENST00000478063 HOXA9P31269 272 aa13.88□□□□□ -0.19
LMNA-214ENST00000478063 GBP1P32455 592 aa13.88□□□□□ -0.19
LMNA-214ENST00000478063 PEX5P50542 639 aa13.88□□□□□ -0.19
LMNA-214ENST00000478063 EFEMP1Q12805 493 aa13.88□□□□□ -0.19
LMNA-214ENST00000478063 ZNF211Q13398 564 aaPredicted RBP13.88□□□□□ -0.19
LMNA-214ENST00000478063 ODF2Q5BJF6 829 aa13.88□□□□□ -0.19
LMNA-214ENST00000478063 C10orf120Q5SQS8 335 aa13.88□□□□□ -0.19
LMNA-214ENST00000478063 ZNF697Q5TEC3 545 aa13.88□□□□□ -0.19
LMNA-214ENST00000478063 TXNRD3NBQ6F5E7 133 aa13.88□□□□□ -0.19
LMNA-214ENST00000478063 MSANTD2Q6P1R3 559 aa13.88□□□□□ -0.19
LMNA-214ENST00000478063 SND1Q7KZF4 910 aaKnown RBP eCLIP13.88□□□□□ -0.19
LMNA-214ENST00000478063 POLNQ7Z5Q5 900 aa13.88□□□□□ -0.19
LMNA-214ENST00000478063 FAM131BQ86XD5 332 aa13.88□□□□□ -0.19
LMNA-214ENST00000478063 HS6ST3Q8IZP7 471 aa13.88□□□□□ -0.19
LMNA-214ENST00000478063 COG1Q8WTW3 980 aa13.88□□□□□ -0.19
LMNA-214ENST00000478063 HSPH1Q92598 858 aa13.88□□□□□ -0.19
LMNA-214ENST00000478063 CASP10Q92851 521 aa13.88□□□□□ -0.19
LMNA-214ENST00000478063 ACSF2Q96CM8 615 aaPredicted RBP13.88□□□□□ -0.19
LMNA-214ENST00000478063 PBKQ96KB5 322 aa13.88□□□□□ -0.19
LMNA-214ENST00000478063 CAPZA3Q96KX2 299 aa13.88□□□□□ -0.19
LMNA-214ENST00000478063 GCNAQ96QF7 691 aa13.88□□□□□ -0.19
LMNA-214ENST00000478063 CDCA3Q99618 268 aaPredicted RBP13.88□□□□□ -0.19
LMNA-214ENST00000478063 CORO1BQ9BR76 489 aa13.88□□□□□ -0.19
LMNA-214ENST00000478063 IGFLR1Q9H665 355 aa13.88□□□□□ -0.19
LMNA-214ENST00000478063 CCSER2Q9H7U1 834 aa13.88□□□□□ -0.19
LMNA-214ENST00000478063 PIGVQ9NUD9 493 aa13.88□□□□□ -0.19
LMNA-214ENST00000478063 DDX56Q9NY93 547 aaKnown RBP13.88□□□□□ -0.19
LMNA-214ENST00000478063 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.88□□□□□ -0.19
LMNA-214ENST00000478063 SFMBT1Q9UHJ3 866 aa13.88□□□□□ -0.19
LMNA-214ENST00000478063 RASAL2Q9UJF2 1139 aa13.88□□□□□ -0.19
LMNA-214ENST00000478063 PRRC2BQ5JSZ5 2229 aaKnown RBP13.87□□□□□ -0.19
LMNA-214ENST00000478063 ZNF840PA6NDX5 716 aa13.87□□□□□ -0.19
LMNA-214ENST00000478063 MDM4O15151 490 aa13.87□□□□□ -0.19
LMNA-214ENST00000478063 ZNF185O15231 689 aa13.87□□□□□ -0.19
LMNA-214ENST00000478063 IRAK2O43187 625 aa13.87□□□□□ -0.19
LMNA-214ENST00000478063 MSI1O43347 362 aaKnown RBP13.87□□□□□ -0.19
LMNA-214ENST00000478063 CEP104O60308 925 aa13.87□□□□□ -0.19
LMNA-214ENST00000478063 TLR5O60602 858 aa13.87□□□□□ -0.19
LMNA-214ENST00000478063 XYLBO75191 536 aa13.87□□□□□ -0.19
LMNA-214ENST00000478063 TADA3O75528 432 aa13.87□□□□□ -0.19
LMNA-214ENST00000478063 ENDOD1O94919 500 aa13.87□□□□□ -0.19
LMNA-214ENST00000478063 F9P00740 461 aa13.87□□□□□ -0.19
LMNA-214ENST00000478063 HNRNPA1P09651 372 aaKnown RBP eCLIP13.87□□□□□ -0.19
LMNA-214ENST00000478063 MYL4P12829 197 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms