RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 LRCH2Q5VUJ6 765 aa5.1□□□□□ -1.59
CKS1B-207ENST00000477676 E4F1Q66K89 784 aaPredicted RBP5.1□□□□□ -1.59
CKS1B-207ENST00000477676 ZNF585AQ6P3V2 769 aa5.1□□□□□ -1.59
CKS1B-207ENST00000477676 SYNE3Q6ZMZ3 975 aa5.1□□□□□ -1.59
CKS1B-207ENST00000477676 Q6ZUG5 572 aa5.1□□□□□ -1.59
CKS1B-207ENST00000477676 CATSPER4Q7RTX7 472 aa5.1□□□□□ -1.59
CKS1B-207ENST00000477676 STK32CQ86UX6 486 aa5.1□□□□□ -1.59
CKS1B-207ENST00000477676 ZNF410Q86VK4 478 aa5.1□□□□□ -1.59
CKS1B-207ENST00000477676 PALM2Q8IXS6 379 aa5.1□□□□□ -1.59
CKS1B-207ENST00000477676 ABCA7Q8IZY2 2146 aa5.1□□□□□ -1.59
CKS1B-207ENST00000477676 TXNDC5Q8NBS9 432 aaKnown RBP5.1□□□□□ -1.59
CKS1B-207ENST00000477676 TBCKQ8TEA7 893 aa5.1□□□□□ -1.59
CKS1B-207ENST00000477676 NUP205Q92621 2012 aa5.1□□□□□ -1.59
CKS1B-207ENST00000477676 RABGGTAQ92696 567 aa5.1□□□□□ -1.59
CKS1B-207ENST00000477676 FGF14Q92915 247 aa5.1□□□□□ -1.59
CKS1B-207ENST00000477676 TMEM143Q96AN5 459 aa5.1□□□□□ -1.59
CKS1B-207ENST00000477676 CCDC136Q96JN2 1154 aa5.1□□□□□ -1.59
CKS1B-207ENST00000477676 CCDC140Q96MF4 163 aa5.1□□□□□ -1.59
CKS1B-207ENST00000477676 NLRP4Q96MN2 994 aa5.1□□□□□ -1.59
CKS1B-207ENST00000477676 SCLT1Q96NL6 688 aa5.1□□□□□ -1.59
CKS1B-207ENST00000477676 AIFM3Q96NN9 605 aa5.1□□□□□ -1.59
CKS1B-207ENST00000477676 CLIC6Q96NY7 704 aa5.1□□□□□ -1.59
CKS1B-207ENST00000477676 GAD1Q99259 594 aa5.1□□□□□ -1.59
CKS1B-207ENST00000477676 SYT3Q9BQG1 590 aa5.1□□□□□ -1.59
CKS1B-207ENST00000477676 PAAF1Q9BRP4 392 aa5.1□□□□□ -1.59
CKS1B-207ENST00000477676 MCMBPQ9BTE3 642 aa5.1□□□□□ -1.59
CKS1B-207ENST00000477676 HERC2P3Q9BVR0 1158 aa5.1□□□□□ -1.59
CKS1B-207ENST00000477676 TEKT3Q9BXF9 490 aa5.1□□□□□ -1.59
CKS1B-207ENST00000477676 AGXT2Q9BYV1 514 aa5.1□□□□□ -1.59
CKS1B-207ENST00000477676 RHOBTB2Q9BYZ6 727 aa5.1□□□□□ -1.59
CKS1B-207ENST00000477676 NT5C3AQ9H0P0 336 aa5.1□□□□□ -1.59
CKS1B-207ENST00000477676 GLT8D2Q9H1C3 349 aa5.1□□□□□ -1.59
CKS1B-207ENST00000477676 DHX33Q9H6R0 707 aaKnown RBP5.1□□□□□ -1.59
CKS1B-207ENST00000477676 RSAD1Q9HA92 442 aa5.1□□□□□ -1.59
CKS1B-207ENST00000477676 NCOA5Q9HCD5 579 aaKnown RBP5.1□□□□□ -1.59
CKS1B-207ENST00000477676 C6orf50Q9HD87 102 aa5.1□□□□□ -1.59
CKS1B-207ENST00000477676 IGSF5Q9NSI5 407 aa5.1□□□□□ -1.59
CKS1B-207ENST00000477676 KIAA1522Q9P206 1035 aaPredicted RBP5.1□□□□□ -1.59
CKS1B-207ENST00000477676 PRG3Q9Y2Y8 225 aaPredicted RBP5.1□□□□□ -1.59
CKS1B-207ENST00000477676 MTF2Q9Y483 593 aaPredicted RBP5.1□□□□□ -1.59
CKS1B-207ENST00000477676 HES2Q9Y543 173 aa5.1□□□□□ -1.59
CKS1B-207ENST00000477676 PKD1L2Q7Z442 2459 aa5.09□□□□□ -1.59
CKS1B-207ENST00000477676 ASCC3Q8N3C0 2202 aaKnown RBP5.09□□□□□ -1.59
CKS1B-207ENST00000477676 PCNX2A6NKB5 2137 aa5.09□□□□□ -1.59
CKS1B-207ENST00000477676 MYO18AQ92614 2054 aaKnown RBP5.09□□□□□ -1.59
CKS1B-207ENST00000477676 ARL5CA6NH57 179 aa5.09□□□□□ -1.59
CKS1B-207ENST00000477676 ADAM12O43184 909 aa5.09□□□□□ -1.59
CKS1B-207ENST00000477676 LAMTOR5O43504 91 aa5.09□□□□□ -1.59
CKS1B-207ENST00000477676 TGM5O43548 720 aa5.09□□□□□ -1.59
CKS1B-207ENST00000477676 ALDH2P05091 517 aa5.09□□□□□ -1.59
CKS1B-207ENST00000477676 SRGAP2CP0DJJ0 459 aa5.09□□□□□ -1.59
CKS1B-207ENST00000477676 LAMP2P13473 410 aa5.09□□□□□ -1.59
CKS1B-207ENST00000477676 NCLP19338 710 aaKnown RBP5.09□□□□□ -1.59
CKS1B-207ENST00000477676 CD72P21854 359 aa5.09□□□□□ -1.59
CKS1B-207ENST00000477676 SFPQP23246 707 aaKnown RBP eCLIP5.09□□□□□ -1.59
CKS1B-207ENST00000477676 SFNP31947 248 aa5.09□□□□□ -1.59
CKS1B-207ENST00000477676 SCNN1GP51170 649 aa5.09□□□□□ -1.59
CKS1B-207ENST00000477676 JAK3P52333 1124 aa5.09□□□□□ -1.59
CKS1B-207ENST00000477676 RACK1P63244 317 aaKnown RBP5.09□□□□□ -1.59
CKS1B-207ENST00000477676 GPC5P78333 572 aa5.09□□□□□ -1.59
CKS1B-207ENST00000477676 DSG1Q02413 1049 aa5.09□□□□□ -1.59
CKS1B-207ENST00000477676 LAMTOR4Q0VGL1 99 aa5.09□□□□□ -1.59
CKS1B-207ENST00000477676 GIT2Q14161 759 aa5.09□□□□□ -1.59
CKS1B-207ENST00000477676 EARS2Q5JPH6 523 aaKnown RBP5.09□□□□□ -1.59
CKS1B-207ENST00000477676 PRSS55Q6UWB4 352 aaPredicted RBP5.09□□□□□ -1.59
CKS1B-207ENST00000477676 PARM1Q6UWI2 310 aa5.09□□□□□ -1.59
CKS1B-207ENST00000477676 DGLUCYQ7Z3D6 616 aa5.09□□□□□ -1.59
CKS1B-207ENST00000477676 MIER3Q7Z3K6 550 aa5.09□□□□□ -1.59
CKS1B-207ENST00000477676 CDR2LQ86X02 465 aaPredicted RBP5.09□□□□□ -1.59
CKS1B-207ENST00000477676 ZNF575Q86XF7 245 aa5.09□□□□□ -1.59
CKS1B-207ENST00000477676 PALB2Q86YC2 1186 aa5.09□□□□□ -1.59
CKS1B-207ENST00000477676 MIB1Q86YT6 1006 aa5.09□□□□□ -1.59
CKS1B-207ENST00000477676 C1orf210Q8IVY1 113 aa5.09□□□□□ -1.59
CKS1B-207ENST00000477676 PJA1Q8NG27 643 aa5.09□□□□□ -1.59
CKS1B-207ENST00000477676 RDM1Q8NG50 284 aa5.09□□□□□ -1.59
CKS1B-207ENST00000477676 PLEKHO2Q8TD55 490 aa5.09□□□□□ -1.59
CKS1B-207ENST00000477676 PRPF31Q8WWY3 499 aaKnown RBP5.09□□□□□ -1.59
CKS1B-207ENST00000477676 SMG7Q92540 1137 aaKnown RBP5.09□□□□□ -1.59
CKS1B-207ENST00000477676 CPB2Q96IY4 423 aa5.09□□□□□ -1.59
CKS1B-207ENST00000477676 SEC16BQ96JE7 1060 aa5.09□□□□□ -1.59
CKS1B-207ENST00000477676 YTHDC1Q96MU7 727 aaKnown RBP5.09□□□□□ -1.59
CKS1B-207ENST00000477676 TMEM175Q9BSA9 504 aa5.09□□□□□ -1.59
CKS1B-207ENST00000477676 DDX23Q9BUQ8 820 aaKnown RBP5.09□□□□□ -1.59
CKS1B-207ENST00000477676 DEF6Q9H4E7 631 aa5.09□□□□□ -1.59
CKS1B-207ENST00000477676 KCNMB3Q9NPA1 279 aa5.09□□□□□ -1.59
CKS1B-207ENST00000477676 XPNPEP1Q9NQW7 623 aa5.09□□□□□ -1.59
CKS1B-207ENST00000477676 ARHGEF3Q9NR81 526 aa5.09□□□□□ -1.59
CKS1B-207ENST00000477676 SLC2A4RGQ9NR83 387 aa5.09□□□□□ -1.59
CKS1B-207ENST00000477676 MRPL17Q9NRX2 175 aaKnown RBP5.09□□□□□ -1.59
CKS1B-207ENST00000477676 RGL1Q9NZL6 768 aa5.09□□□□□ -1.59
CKS1B-207ENST00000477676 EMC9Q9Y3B6 208 aa5.09□□□□□ -1.59
CKS1B-207ENST00000477676 SIT1Q9Y3P8 196 aa5.09□□□□□ -1.59
CKS1B-207ENST00000477676 IPPQ9Y573 584 aa5.09□□□□□ -1.59
CKS1B-207ENST00000477676 COL4A3BPQ9Y5P4 624 aa5.09□□□□□ -1.59
CKS1B-207ENST00000477676 SNX14Q9Y5W7 946 aa5.09□□□□□ -1.59
CKS1B-207ENST00000477676 NUMBLQ9Y6R0 609 aa5.09□□□□□ -1.59
CKS1B-207ENST00000477676 CACNA1EQ15878 2313 aa5.09□□□□□ -1.59
CKS1B-207ENST00000477676 OBSL1O75147 1896 aa5.09□□□□□ -1.6
CKS1B-207ENST00000477676 KIAA1549LQ6ZVL6 1849 aa5.09□□□□□ -1.6
CKS1B-207ENST00000477676 SCN1AP35498 2009 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms