RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 ZNF263O14978 683 aa16.03■□□□□ 0.16
SEC13-215ENST00000477547 GLI1P08151 1106 aa16.03■□□□□ 0.16
SEC13-215ENST00000477547 TCF15Q12870 199 aa16.03■□□□□ 0.16
SEC13-215ENST00000477547 SPA17Q15506 151 aa16.03■□□□□ 0.16
SEC13-215ENST00000477547 TAF5Q15542 800 aa16.03■□□□□ 0.16
SEC13-215ENST00000477547 C10orf120Q5SQS8 335 aa16.03■□□□□ 0.16
SEC13-215ENST00000477547 TADA2BQ86TJ2 420 aa16.03■□□□□ 0.16
SEC13-215ENST00000477547 MAB21L3Q8N8X9 362 aa16.03■□□□□ 0.16
SEC13-215ENST00000477547 TDRD5Q8NAT2 981 aaKnown RBP16.03■□□□□ 0.16
SEC13-215ENST00000477547 RNF139Q8WU17 664 aa16.03■□□□□ 0.16
SEC13-215ENST00000477547 EDAQ92838 391 aa16.03■□□□□ 0.16
SEC13-215ENST00000477547 MYADMQ96S97 322 aa16.03■□□□□ 0.16
SEC13-215ENST00000477547 CDK5RAP1Q96SZ6 601 aaKnown RBP16.03■□□□□ 0.16
SEC13-215ENST00000477547 SELENOOQ9BVL4 669 aa16.03■□□□□ 0.16
SEC13-215ENST00000477547 PACSIN1Q9BY11 444 aa16.03■□□□□ 0.16
SEC13-215ENST00000477547 THAP2Q9H0W7 228 aa16.03■□□□□ 0.16
SEC13-215ENST00000477547 POPDC2Q9HBU9 364 aa16.03■□□□□ 0.16
SEC13-215ENST00000477547 ABCC13Q9NSE7 274 aa16.03■□□□□ 0.16
SEC13-215ENST00000477547 MYO1AQ9UBC5 1043 aa16.03■□□□□ 0.16
SEC13-215ENST00000477547 ZMYM5Q9UJ78 669 aa16.03■□□□□ 0.16
SEC13-215ENST00000477547 NUDT5Q9UKK9 219 aa16.03■□□□□ 0.16
SEC13-215ENST00000477547 TMEM221A6NGB7 291 aa16.02■□□□□ 0.16
SEC13-215ENST00000477547 EIF3CLB5ME19 914 aaKnown RBP16.02■□□□□ 0.16
SEC13-215ENST00000477547 M0R296 226 aa16.02■□□□□ 0.16
SEC13-215ENST00000477547 CAPN9O14815 690 aa16.02■□□□□ 0.16
SEC13-215ENST00000477547 COCHO43405 550 aa16.02■□□□□ 0.16
SEC13-215ENST00000477547 LCA5LO95447 670 aa16.02■□□□□ 0.16
SEC13-215ENST00000477547 GJB6O95452 261 aa16.02■□□□□ 0.16
SEC13-215ENST00000477547 OLFM2O95897 454 aa16.02■□□□□ 0.16
SEC13-215ENST00000477547 H2AFZP0C0S5 128 aa16.02■□□□□ 0.16
SEC13-215ENST00000477547 NCAM1P13591 858 aa16.02■□□□□ 0.16
SEC13-215ENST00000477547 PFKLP17858 780 aa16.02■□□□□ 0.16
SEC13-215ENST00000477547 GALCP54803 685 aa16.02■□□□□ 0.16
SEC13-215ENST00000477547 YWHAZP63104 245 aaKnown RBP16.02■□□□□ 0.16
SEC13-215ENST00000477547 CCZ1BP86790 482 aa16.02■□□□□ 0.16
SEC13-215ENST00000477547 CCZ1P86791 482 aaPredicted RBP16.02■□□□□ 0.16
SEC13-215ENST00000477547 H2AFVQ71UI9 128 aa16.02■□□□□ 0.16
SEC13-215ENST00000477547 OTOP3Q7RTS5 596 aa16.02■□□□□ 0.16
SEC13-215ENST00000477547 ZSCAN18Q8TBC5 510 aaPredicted RBP16.02■□□□□ 0.16
SEC13-215ENST00000477547 CTNNBL1Q8WYA6 563 aaPredicted RBP16.02■□□□□ 0.16
SEC13-215ENST00000477547 PBXIP1Q96AQ6 731 aa16.02■□□□□ 0.16
SEC13-215ENST00000477547 MCEEQ96PE7 176 aa16.02■□□□□ 0.16
SEC13-215ENST00000477547 SLC2A13Q96QE2 648 aa16.02■□□□□ 0.16
SEC13-215ENST00000477547 SLC22A12Q96S37 553 aa16.02■□□□□ 0.16
SEC13-215ENST00000477547 EIF3CQ99613 913 aaKnown RBP16.02■□□□□ 0.16
SEC13-215ENST00000477547 PHF7Q9BWX1 381 aaPredicted RBP16.02■□□□□ 0.16
SEC13-215ENST00000477547 LUC7LQ9NQ29 371 aaKnown RBP16.02■□□□□ 0.16
SEC13-215ENST00000477547 OLA1Q9NTK5 396 aaKnown RBP16.02■□□□□ 0.16
SEC13-215ENST00000477547 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.02■□□□□ 0.16
SEC13-215ENST00000477547 GDE1Q9NZC3 331 aa16.02■□□□□ 0.16
SEC13-215ENST00000477547 RASAL2Q9UJF2 1139 aa16.02■□□□□ 0.16
SEC13-215ENST00000477547 EPN1Q9Y6I3 576 aaPredicted RBP16.02■□□□□ 0.16
SEC13-215ENST00000477547 SCINQ9Y6U3 715 aa16.02■□□□□ 0.16
SEC13-215ENST00000477547 TCRBV5S1A1TA0A578 114 aa16.01■□□□□ 0.15
SEC13-215ENST00000477547 ANKRD62A6NC57 917 aa16.01■□□□□ 0.15
SEC13-215ENST00000477547 MDM4O15151 490 aa16.01■□□□□ 0.15
SEC13-215ENST00000477547 ARHGAP6O43182 974 aa16.01■□□□□ 0.15
SEC13-215ENST00000477547 GFRA3O60609 400 aa16.01■□□□□ 0.15
SEC13-215ENST00000477547 PRAMEF12O95522 483 aa16.01■□□□□ 0.15
SEC13-215ENST00000477547 MBL2P11226 248 aaPredicted RBP16.01■□□□□ 0.15
SEC13-215ENST00000477547 FLT3P36888 993 aa16.01■□□□□ 0.15
SEC13-215ENST00000477547 AVPR1AP37288 418 aa16.01■□□□□ 0.15
SEC13-215ENST00000477547 RNASE9P60153 205 aaKnown RBP16.01■□□□□ 0.15
SEC13-215ENST00000477547 PLEKHA7Q6IQ23 1121 aa16.01■□□□□ 0.15
SEC13-215ENST00000477547 MSANTD2Q6P1R3 559 aa16.01■□□□□ 0.15
SEC13-215ENST00000477547 TRIM67Q6ZTA4 783 aa16.01■□□□□ 0.15
SEC13-215ENST00000477547 BMP8AQ7Z5Y6 402 aa16.01■□□□□ 0.15
SEC13-215ENST00000477547 CMTM8Q8IZV2 173 aa16.01■□□□□ 0.15
SEC13-215ENST00000477547 DEFB106AQ8N104 65 aa16.01■□□□□ 0.15
SEC13-215ENST00000477547 EMC1Q8N766 993 aa16.01■□□□□ 0.15
SEC13-215ENST00000477547 ARL14EPQ8N8R7 260 aaPredicted RBP16.01■□□□□ 0.15
SEC13-215ENST00000477547 ACRBPQ8NEB7 543 aa16.01■□□□□ 0.15
SEC13-215ENST00000477547 ACSF2Q96CM8 615 aaPredicted RBP16.01■□□□□ 0.15
SEC13-215ENST00000477547 ARHGEF26Q96DR7 871 aa16.01■□□□□ 0.15
SEC13-215ENST00000477547 PPP1R9BQ96SB3 815 aa16.01■□□□□ 0.15
SEC13-215ENST00000477547 DESI2Q9BSY9 194 aa16.01■□□□□ 0.15
SEC13-215ENST00000477547 SLC46A2Q9BY10 475 aa16.01■□□□□ 0.15
SEC13-215ENST00000477547 PARVAQ9NVD7 372 aa16.01■□□□□ 0.15
SEC13-215ENST00000477547 SOBPA7XYQ1 873 aa16■□□□□ 0.15
SEC13-215ENST00000477547 FYNP06241 537 aa16■□□□□ 0.15
SEC13-215ENST00000477547 TMEM253P0C7T8 217 aa16■□□□□ 0.15
SEC13-215ENST00000477547 KRT3P12035 628 aa16■□□□□ 0.15
SEC13-215ENST00000477547 HDCP19113 662 aa16■□□□□ 0.15
SEC13-215ENST00000477547 ATP5C1P36542 298 aaKnown RBP16■□□□□ 0.15
SEC13-215ENST00000477547 MAGEA1P43355 309 aa16■□□□□ 0.15
SEC13-215ENST00000477547 EFEMP1Q12805 493 aa16■□□□□ 0.15
SEC13-215ENST00000477547 DCAF6Q58WW2 860 aa16■□□□□ 0.15
SEC13-215ENST00000477547 C10orf76Q5T2E6 689 aa16■□□□□ 0.15
SEC13-215ENST00000477547 DCUN1D2Q6PH85 259 aa16■□□□□ 0.15
SEC13-215ENST00000477547 KLHDC10Q6PID8 442 aa16■□□□□ 0.15
SEC13-215ENST00000477547 BEND5Q7L4P6 421 aa16■□□□□ 0.15
SEC13-215ENST00000477547 TAC4Q86UU9 113 aa16■□□□□ 0.15
SEC13-215ENST00000477547 MIB1Q86YT6 1006 aa16■□□□□ 0.15
SEC13-215ENST00000477547 JOSD2Q8TAC2 188 aa16■□□□□ 0.15
SEC13-215ENST00000477547 DQX1Q8TE96 717 aaKnown RBP16■□□□□ 0.15
SEC13-215ENST00000477547 ZSWIM3Q96MP5 696 aa16■□□□□ 0.15
SEC13-215ENST00000477547 SMG9Q9H0W8 520 aaKnown RBP16■□□□□ 0.15
SEC13-215ENST00000477547 SMOC2Q9H3U7 446 aa16■□□□□ 0.15
SEC13-215ENST00000477547 FAM204AQ9H8W3 233 aa16■□□□□ 0.15
SEC13-215ENST00000477547 SMPD4Q9NXE4 827 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms