RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 TRIM9Q9C026 710 aa7.06□□□□□ -1.28
RTFDC1-206ENST00000477485 GAREM1Q9H706 876 aa7.06□□□□□ -1.28
RTFDC1-206ENST00000477485 IL21RQ9HBE5 538 aa7.06□□□□□ -1.28
RTFDC1-206ENST00000477485 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.06□□□□□ -1.287e-6■■■■■ 74.5
RTFDC1-206ENST00000477485 TLR8Q9NR97 1041 aaKnown RBP7.06□□□□□ -1.28
RTFDC1-206ENST00000477485 FAM49BQ9NUQ9 324 aa7.06□□□□□ -1.28
RTFDC1-206ENST00000477485 WDR35Q9P2L0 1181 aa7.06□□□□□ -1.28
RTFDC1-206ENST00000477485 NUDT5Q9UKK9 219 aa7.06□□□□□ -1.28
RTFDC1-206ENST00000477485 SRPRBQ9Y5M8 271 aaKnown RBP7.06□□□□□ -1.28
RTFDC1-206ENST00000477485 GOLGA4Q13439 2230 aaKnown RBP7.05□□□□□ -1.28
RTFDC1-206ENST00000477485 MYLKQ15746 1914 aa7.05□□□□□ -1.28
RTFDC1-206ENST00000477485 DMXL2Q8TDJ6 3036 aa7.05□□□□□ -1.28
RTFDC1-206ENST00000477485 A0A087X0B3 334 aa7.05□□□□□ -1.28
RTFDC1-206ENST00000477485 A0A1B0GTW7 788 aa7.05□□□□□ -1.28
RTFDC1-206ENST00000477485 FRMD3A2A2Y4 597 aa7.05□□□□□ -1.28
RTFDC1-206ENST00000477485 MDM4O15151 490 aa7.05□□□□□ -1.28
RTFDC1-206ENST00000477485 CYP26A1O43174 497 aa7.05□□□□□ -1.28
RTFDC1-206ENST00000477485 CACNG3O60359 315 aa7.05□□□□□ -1.28
RTFDC1-206ENST00000477485 EXOC3O60645 756 aa7.05□□□□□ -1.28
RTFDC1-206ENST00000477485 TBX18O95935 607 aa7.05□□□□□ -1.28
RTFDC1-206ENST00000477485 CHRM1P11229 460 aaPredicted RBP7.05□□□□□ -1.28
RTFDC1-206ENST00000477485 ATP5C1P36542 298 aaKnown RBP7.05□□□□□ -1.28
RTFDC1-206ENST00000477485 MATKP42679 507 aa7.05□□□□□ -1.28
RTFDC1-206ENST00000477485 CASP4P49662 377 aa7.05□□□□□ -1.28
RTFDC1-206ENST00000477485 TUBP50607 506 aa7.05□□□□□ -1.28
RTFDC1-206ENST00000477485 CYP24A1Q07973 514 aa7.05□□□□□ -1.28
RTFDC1-206ENST00000477485 GSE1Q14687 1217 aa7.05□□□□□ -1.28
RTFDC1-206ENST00000477485 PSMD6Q15008 389 aa7.05□□□□□ -1.28
RTFDC1-206ENST00000477485 STK38Q15208 465 aa7.05□□□□□ -1.28
RTFDC1-206ENST00000477485 FUT11Q495W5 492 aa7.05□□□□□ -1.28
RTFDC1-206ENST00000477485 SOWAHCQ53LP3 525 aaPredicted RBP7.05□□□□□ -1.28
RTFDC1-206ENST00000477485 C10orf120Q5SQS8 335 aa7.05□□□□□ -1.28
RTFDC1-206ENST00000477485 DCAF12L1Q5VU92 463 aa7.05□□□□□ -1.28
RTFDC1-206ENST00000477485 SLCO6A1Q86UG4 719 aa7.05□□□□□ -1.28
RTFDC1-206ENST00000477485 MARCH9Q86YJ5 346 aa7.05□□□□□ -1.28
RTFDC1-206ENST00000477485 SLC2A14Q8TDB8 520 aa7.05□□□□□ -1.28
RTFDC1-206ENST00000477485 RHBDD1Q8TEB9 315 aa7.05□□□□□ -1.28
RTFDC1-206ENST00000477485 UCMAQ8WVF2 138 aa7.05□□□□□ -1.28
RTFDC1-206ENST00000477485 PRCCQ92733 491 aaPredicted RBP7.05□□□□□ -1.28
RTFDC1-206ENST00000477485 RNF25Q96BH1 459 aaPredicted RBP7.05□□□□□ -1.28
RTFDC1-206ENST00000477485 DHX58Q96C10 678 aa7.05□□□□□ -1.28
RTFDC1-206ENST00000477485 ZNF419Q96HQ0 510 aaPredicted RBP7.05□□□□□ -1.28
RTFDC1-206ENST00000477485 ZDHHC5Q9C0B5 715 aa7.05□□□□□ -1.28
RTFDC1-206ENST00000477485 LRRC27Q9C0I9 530 aa7.05□□□□□ -1.28
RTFDC1-206ENST00000477485 FBXO44Q9H4M3 255 aa7.05□□□□□ -1.28
RTFDC1-206ENST00000477485 AGPAT3Q9NRZ7 376 aa7.05□□□□□ -1.28
RTFDC1-206ENST00000477485 TM7SF3Q9NS93 570 aa7.05□□□□□ -1.28
RTFDC1-206ENST00000477485 EIF2B4Q9UI10 523 aaKnown RBP7.05□□□□□ -1.28
RTFDC1-206ENST00000477485 PCOLCE2Q9UKZ9 415 aa7.05□□□□□ -1.28
RTFDC1-206ENST00000477485 HCN2Q9UL51 889 aa7.05□□□□□ -1.28
RTFDC1-206ENST00000477485 STARD13Q9Y3M8 1113 aa7.05□□□□□ -1.28
RTFDC1-206ENST00000477485 STON1Q9Y6Q2 735 aa7.05□□□□□ -1.28
RTFDC1-206ENST00000477485 IGSF10Q6WRI0 2623 aa7.05□□□□□ -1.28
RTFDC1-206ENST00000477485 ACACAQ13085 2346 aa7.05□□□□□ -1.28
RTFDC1-206ENST00000477485 MUC22E2RYF6 1773 aaPredicted RBP7.05□□□□□ -1.28
RTFDC1-206ENST00000477485 NUMA1Q14980 2115 aa7.04□□□□□ -1.28
RTFDC1-206ENST00000477485 A0A1W2PQH9 124 aa7.04□□□□□ -1.28
RTFDC1-206ENST00000477485 FAM149AA5PLN7 773 aa7.04□□□□□ -1.28
RTFDC1-206ENST00000477485 FAM221BA6H8Z2 402 aa7.04□□□□□ -1.28
RTFDC1-206ENST00000477485 EIF3DO15371 548 aaKnown RBP eCLIP7.04□□□□□ -1.28
RTFDC1-206ENST00000477485 BCAT2O15382 392 aaPredicted RBP7.04□□□□□ -1.28
RTFDC1-206ENST00000477485 CILPO75339 1184 aa7.04□□□□□ -1.28
RTFDC1-206ENST00000477485 GJB3O75712 270 aa7.04□□□□□ -1.28
RTFDC1-206ENST00000477485 BEST1O76090 585 aa7.04□□□□□ -1.28
RTFDC1-206ENST00000477485 FAM200BP0CF97 657 aa7.04□□□□□ -1.28
RTFDC1-206ENST00000477485 RARGP13631 454 aa7.04□□□□□ -1.28
RTFDC1-206ENST00000477485 P4HA1P13674 534 aa7.04□□□□□ -1.28
RTFDC1-206ENST00000477485 PDCP20941 246 aa7.04□□□□□ -1.28
RTFDC1-206ENST00000477485 ACO1P21399 889 aaKnown RBP7.04□□□□□ -1.28
RTFDC1-206ENST00000477485 ATICP31939 592 aa7.04□□□□□ -1.28
RTFDC1-206ENST00000477485 PGFP49763 221 aa7.04□□□□□ -1.28
RTFDC1-206ENST00000477485 AMPD3Q01432 767 aa7.04□□□□□ -1.28
RTFDC1-206ENST00000477485 CYP4F3Q08477 520 aa7.04□□□□□ -1.28
RTFDC1-206ENST00000477485 NCOA4Q13772 614 aa7.04□□□□□ -1.28
RTFDC1-206ENST00000477485 HLA-BQ31612 363 aa7.04□□□□□ -1.28
RTFDC1-206ENST00000477485 C8orf34Q49A92 452 aa7.04□□□□□ -1.28
RTFDC1-206ENST00000477485 FAM26FQ5R3K3 315 aa7.04□□□□□ -1.28
RTFDC1-206ENST00000477485 IL27RAQ6UWB1 636 aa7.04□□□□□ -1.28
RTFDC1-206ENST00000477485 CCNI2Q6ZMN8 369 aaPredicted RBP7.04□□□□□ -1.28
RTFDC1-206ENST00000477485 HTR3DQ70Z44 454 aa7.04□□□□□ -1.28
RTFDC1-206ENST00000477485 FUKQ8N0W3 1084 aa7.04□□□□□ -1.28
RTFDC1-206ENST00000477485 ZNF516Q92618 1163 aa7.04□□□□□ -1.28
RTFDC1-206ENST00000477485 SIPA1Q96FS4 1042 aa7.04□□□□□ -1.28
RTFDC1-206ENST00000477485 SMOQ99835 787 aa7.04□□□□□ -1.28
RTFDC1-206ENST00000477485 GABRG3Q99928 467 aa7.04□□□□□ -1.28
RTFDC1-206ENST00000477485 KLF16Q9BXK1 252 aaPredicted RBP7.04□□□□□ -1.28
RTFDC1-206ENST00000477485 CIPCQ9C0C6 399 aa7.04□□□□□ -1.28
RTFDC1-206ENST00000477485 TNMDQ9H2S6 317 aa7.04□□□□□ -1.28
RTFDC1-206ENST00000477485 HMGXB4Q9UGU5 601 aa7.04□□□□□ -1.28
RTFDC1-206ENST00000477485 RASAL2Q9UJF2 1139 aa7.04□□□□□ -1.28
RTFDC1-206ENST00000477485 NAGPAQ9UK23 515 aa7.04□□□□□ -1.28
RTFDC1-206ENST00000477485 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.04□□□□□ -1.28
RTFDC1-206ENST00000477485 FNDC3AQ9Y2H6 1198 aaKnown RBP7.04□□□□□ -1.28
RTFDC1-206ENST00000477485 A0A1B0GVT2 93 aa7.03□□□□□ -1.28
RTFDC1-206ENST00000477485 KCNJ18B7U540 433 aa7.03□□□□□ -1.28
RTFDC1-206ENST00000477485 GFRA2O00451 464 aa7.03□□□□□ -1.28
RTFDC1-206ENST00000477485 FLRT2O43155 660 aa7.03□□□□□ -1.28
RTFDC1-206ENST00000477485 TGFB1I1O43294 461 aa7.03□□□□□ -1.28
RTFDC1-206ENST00000477485 CYBBP04839 570 aa7.03□□□□□ -1.28
RTFDC1-206ENST00000477485 EPHX1P07099 455 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms