RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 MTBPQ96DY7 904 aa11.4□□□□□ -0.58
COL27A1-204ENST00000477421 SPDL1Q96EA4 605 aa11.4□□□□□ -0.58
COL27A1-204ENST00000477421 MRPL45Q9BRJ2 306 aaKnown RBP11.4□□□□□ -0.58
COL27A1-204ENST00000477421 GBA2Q9HCG7 927 aaPredicted RBP11.4□□□□□ -0.58
COL27A1-204ENST00000477421 C17orf102A2RUQ5 167 aa11.4□□□□□ -0.59
COL27A1-204ENST00000477421 FAM155BO75949 473 aa11.4□□□□□ -0.59
COL27A1-204ENST00000477421 MT-CO1P00395 513 aa11.4□□□□□ -0.59
COL27A1-204ENST00000477421 STX1BP61266 288 aa11.4□□□□□ -0.59
COL27A1-204ENST00000477421 KIF19Q2TAC6 998 aa11.4□□□□□ -0.59
COL27A1-204ENST00000477421 BBS5Q8N3I7 341 aa11.4□□□□□ -0.59
COL27A1-204ENST00000477421 POU5F2Q8N7G0 328 aa11.4□□□□□ -0.59
COL27A1-204ENST00000477421 NUF2Q9BZD4 464 aa11.4□□□□□ -0.59
COL27A1-204ENST00000477421 IL1RAPL1Q9NZN1 696 aa11.4□□□□□ -0.59
COL27A1-204ENST00000477421 TUBGCP4Q9UGJ1 667 aa11.4□□□□□ -0.59
COL27A1-204ENST00000477421 SCOCQ9UIL1 159 aa11.4□□□□□ -0.59
COL27A1-204ENST00000477421 SNCAIPQ9Y6H5 919 aa11.4□□□□□ -0.59
COL27A1-204ENST00000477421 SIPA1L3O60292 1781 aaPredicted RBP11.4□□□□□ -0.59
COL27A1-204ENST00000477421 GHRP10912 638 aa11.39□□□□□ -0.59
COL27A1-204ENST00000477421 ENO3P13929 434 aaPredicted RBP11.39□□□□□ -0.59
COL27A1-204ENST00000477421 PCSK1P29120 753 aa11.39□□□□□ -0.59
COL27A1-204ENST00000477421 ZNF143P52747 638 aaPredicted RBP11.39□□□□□ -0.59
COL27A1-204ENST00000477421 GDF10P55107 478 aa11.39□□□□□ -0.59
COL27A1-204ENST00000477421 WNT7BP56706 349 aa11.39□□□□□ -0.59
COL27A1-204ENST00000477421 ZNF280AP59817 542 aaPredicted RBP11.39□□□□□ -0.59
COL27A1-204ENST00000477421 HSP90AA5PQ58FG0 334 aa11.39□□□□□ -0.59
COL27A1-204ENST00000477421 FAM117BQ6P1L5 589 aa11.39□□□□□ -0.59
COL27A1-204ENST00000477421 PIGZQ86VD9 579 aa11.39□□□□□ -0.59
COL27A1-204ENST00000477421 RMDN1Q96DB5 314 aa11.39□□□□□ -0.59
COL27A1-204ENST00000477421 NSL1Q96IY1 281 aa11.39□□□□□ -0.59
COL27A1-204ENST00000477421 TXNRD2Q9NNW7 524 aa11.39□□□□□ -0.59
COL27A1-204ENST00000477421 ATP8B3O60423 1300 aa11.39□□□□□ -0.59
COL27A1-204ENST00000477421 RNF103O00237 685 aa11.39□□□□□ -0.59
COL27A1-204ENST00000477421 FSBPO95073 299 aa11.39□□□□□ -0.59
COL27A1-204ENST00000477421 ATP6V1G2O95670 118 aa11.39□□□□□ -0.59
COL27A1-204ENST00000477421 TRUB2O95900 331 aaKnown RBP11.39□□□□□ -0.59
COL27A1-204ENST00000477421 USP17L7P0C7H9 530 aa11.39□□□□□ -0.59
COL27A1-204ENST00000477421 SPRP35270 261 aaPredicted RBP11.39□□□□□ -0.59
COL27A1-204ENST00000477421 RABGGTBP53611 331 aa11.39□□□□□ -0.59
COL27A1-204ENST00000477421 COG7P83436 770 aa11.39□□□□□ -0.59
COL27A1-204ENST00000477421 MAP3K21Q5TCX8 1036 aa11.39□□□□□ -0.59
COL27A1-204ENST00000477421 KLC3Q6P597 504 aa11.39□□□□□ -0.59
COL27A1-204ENST00000477421 CXCL17Q6UXB2 119 aa11.39□□□□□ -0.59
COL27A1-204ENST00000477421 ZC3H3Q8IXZ2 948 aaKnown RBP11.39□□□□□ -0.59
COL27A1-204ENST00000477421 ATXN2LQ8WWM7 1075 aaKnown RBP11.39□□□□□ -0.59
COL27A1-204ENST00000477421 KAT2BQ92831 832 aa11.39□□□□□ -0.59
COL27A1-204ENST00000477421 IFT43Q96FT9 208 aa11.39□□□□□ -0.59
COL27A1-204ENST00000477421 RNF157Q96PX1 679 aa11.39□□□□□ -0.59
COL27A1-204ENST00000477421 MECRQ9BV79 373 aa11.39□□□□□ -0.59
COL27A1-204ENST00000477421 SLC17A7Q9P2U7 560 aa11.39□□□□□ -0.59
COL27A1-204ENST00000477421 DNAJC16Q9Y2G8 782 aa11.39□□□□□ -0.59
COL27A1-204ENST00000477421 CYP1A1P04798 512 aaPredicted RBP11.39□□□□□ -0.59
COL27A1-204ENST00000477421 THP07101 528 aa11.39□□□□□ -0.59
COL27A1-204ENST00000477421 ATXN8OSP0DMR3 200 aa11.39□□□□□ -0.59
COL27A1-204ENST00000477421 GOT1P17174 413 aa11.39□□□□□ -0.59
COL27A1-204ENST00000477421 CDKN2BP42772 138 aa11.39□□□□□ -0.59
COL27A1-204ENST00000477421 ATXN1P54253 815 aaKnown RBP11.39□□□□□ -0.59
COL27A1-204ENST00000477421 GBE1Q04446 702 aa11.39□□□□□ -0.59
COL27A1-204ENST00000477421 MFSD14CQ5VZR4 134 aa11.39□□□□□ -0.59
COL27A1-204ENST00000477421 HTR3CQ8WXA8 447 aa11.39□□□□□ -0.59
COL27A1-204ENST00000477421 ZFP42Q96MM3 310 aa11.39□□□□□ -0.59
COL27A1-204ENST00000477421 PGLYRP2Q96PD5 576 aa11.39□□□□□ -0.59
COL27A1-204ENST00000477421 TWNKQ96RR1 684 aa11.39□□□□□ -0.59
COL27A1-204ENST00000477421 SEPT5Q99719 369 aaPredicted RBP11.39□□□□□ -0.59
COL27A1-204ENST00000477421 MTO1Q9Y2Z2 717 aaKnown RBP11.39□□□□□ -0.59
COL27A1-204ENST00000477421 C2orf71A6NGG8 1288 aa11.38□□□□□ -0.59
COL27A1-204ENST00000477421 MSCO60682 206 aa11.38□□□□□ -0.59
COL27A1-204ENST00000477421 PAMP19021 973 aa11.38□□□□□ -0.59
COL27A1-204ENST00000477421 ELF1P32519 619 aa11.38□□□□□ -0.59
COL27A1-204ENST00000477421 PPM1FP49593 454 aaPredicted RBP11.38□□□□□ -0.59
COL27A1-204ENST00000477421 SERPINB9P50453 376 aa11.38□□□□□ -0.59
COL27A1-204ENST00000477421 CDC42EP1Q00587 391 aa11.38□□□□□ -0.59
COL27A1-204ENST00000477421 HIC1Q14526 733 aa11.38□□□□□ -0.59
COL27A1-204ENST00000477421 POU6F1Q14863 301 aa11.38□□□□□ -0.59
COL27A1-204ENST00000477421 RASA2Q15283 850 aa11.38□□□□□ -0.59
COL27A1-204ENST00000477421 RCN1Q15293 331 aa11.38□□□□□ -0.59
COL27A1-204ENST00000477421 LRRC38Q5VT99 294 aa11.38□□□□□ -0.59
COL27A1-204ENST00000477421 ACAD11Q709F0 780 aa11.38□□□□□ -0.59
COL27A1-204ENST00000477421 PLPPR4Q7Z2D5 763 aa11.38□□□□□ -0.59
COL27A1-204ENST00000477421 STRA8Q7Z7C7 330 aa11.38□□□□□ -0.59
COL27A1-204ENST00000477421 GSDMBQ8TAX9 411 aa11.38□□□□□ -0.59
COL27A1-204ENST00000477421 LPPQ93052 612 aa11.38□□□□□ -0.59
COL27A1-204ENST00000477421 TINF2Q9BSI4 451 aa11.38□□□□□ -0.59
COL27A1-204ENST00000477421 ULBP1Q9BZM6 244 aa11.38□□□□□ -0.59
COL27A1-204ENST00000477421 PPCSQ9HAB8 311 aa11.38□□□□□ -0.59
COL27A1-204ENST00000477421 CHST12Q9NRB3 414 aa11.38□□□□□ -0.59
COL27A1-204ENST00000477421 ANGPTL2Q9UKU9 493 aa11.38□□□□□ -0.59
COL27A1-204ENST00000477421 TCRBV9S1A1TA0A576 114 aa11.38□□□□□ -0.59
COL27A1-204ENST00000477421 TADA2AO75478 443 aa11.38□□□□□ -0.59
COL27A1-204ENST00000477421 PGK1P00558 417 aa11.38□□□□□ -0.59
COL27A1-204ENST00000477421 ERVK-10P10266 1014 aa11.38□□□□□ -0.59
COL27A1-204ENST00000477421 CCND1P24385 295 aa11.38□□□□□ -0.59
COL27A1-204ENST00000477421 PNPLA4P41247 253 aa11.38□□□□□ -0.59
COL27A1-204ENST00000477421 GAD2Q05329 585 aa11.38□□□□□ -0.59
COL27A1-204ENST00000477421 FOXD4Q12950 439 aaPredicted RBP11.38□□□□□ -0.59
COL27A1-204ENST00000477421 ITGA9Q13797 1035 aa11.38□□□□□ -0.59
COL27A1-204ENST00000477421 SLC1A5Q15758 541 aa11.38□□□□□ -0.59
COL27A1-204ENST00000477421 UBAP2Q5T6F2 1119 aaKnown RBP11.38□□□□□ -0.59
COL27A1-204ENST00000477421 PMF1Q6P1K2 205 aa11.38□□□□□ -0.59
COL27A1-204ENST00000477421 LAYNQ6UX15 382 aa11.38□□□□□ -0.59
COL27A1-204ENST00000477421 TAS1R3Q7RTX0 852 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms