RNA–Protein interactions for RNA: ENST00000476954.1

SMG5-204, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 1,161 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-204ENST00000476954 MDH1BQ5I0G3 518 aa16.29■□□□□ 0.2
SMG5-204ENST00000476954 CSGALNACT2Q8N6G5 542 aa16.29■□□□□ 0.2
SMG5-204ENST00000476954 MED8Q96G25 268 aa16.29■□□□□ 0.2
SMG5-204ENST00000476954 C8orf48Q96LL4 319 aa16.29■□□□□ 0.2
SMG5-204ENST00000476954 SLITRK1Q96PX8 696 aa16.29■□□□□ 0.2
SMG5-204ENST00000476954 XPO6Q96QU8 1125 aaKnown RBP16.29■□□□□ 0.2
SMG5-204ENST00000476954 FIZ1Q96SL8 496 aa16.29■□□□□ 0.2
SMG5-204ENST00000476954 PLK2Q9NYY3 685 aa16.29■□□□□ 0.2
SMG5-204ENST00000476954 SIX4Q9UIU6 781 aa16.29■□□□□ 0.2
SMG5-204ENST00000476954 CDH9Q9ULB4 789 aa16.29■□□□□ 0.2
SMG5-204ENST00000476954 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.29■□□□□ 0.2
SMG5-204ENST00000476954 NOTCH2Q04721 2471 aa16.29■□□□□ 0.2
SMG5-204ENST00000476954 GREM1O60565 184 aa16.28■□□□□ 0.2
SMG5-204ENST00000476954 KRT19P08727 400 aa16.28■□□□□ 0.2
SMG5-204ENST00000476954 GRIA4P48058 902 aa16.28■□□□□ 0.2
SMG5-204ENST00000476954 ST3GAL1Q11201 340 aa16.28■□□□□ 0.2
SMG5-204ENST00000476954 EID2Q8N6I1 236 aa16.28■□□□□ 0.2
SMG5-204ENST00000476954 LRRC52Q8N7C0 313 aa16.28■□□□□ 0.2
SMG5-204ENST00000476954 PRCCQ92733 491 aaPredicted RBP16.28■□□□□ 0.2
SMG5-204ENST00000476954 CEP295NLQ96MC4 621 aa16.28■□□□□ 0.2
SMG5-204ENST00000476954 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.28■□□□□ 0.2
SMG5-204ENST00000476954 RAB34Q9BZG1 259 aa16.28■□□□□ 0.2
SMG5-204ENST00000476954 EHD2Q9NZN4 543 aa16.28■□□□□ 0.2
SMG5-204ENST00000476954 NXF1Q9UBU9 619 aaKnown RBP16.28■□□□□ 0.2
SMG5-204ENST00000476954 STYXL1Q9Y6J8 313 aa16.28■□□□□ 0.2
SMG5-204ENST00000476954 A0A1B0GTQ1 180 aa16.27■□□□□ 0.2
SMG5-204ENST00000476954 PAPSS1O43252 624 aaPredicted RBP16.27■□□□□ 0.2
SMG5-204ENST00000476954 IL18RAPO95256 599 aa16.27■□□□□ 0.2
SMG5-204ENST00000476954 ADSSP30520 456 aa16.27■□□□□ 0.2
SMG5-204ENST00000476954 PGFP49763 221 aa16.27■□□□□ 0.2
SMG5-204ENST00000476954 TOB1P50616 345 aaPredicted RBP16.27■□□□□ 0.2
SMG5-204ENST00000476954 DHX8Q14562 1220 aaKnown RBP16.27■□□□□ 0.2
SMG5-204ENST00000476954 SHBQ15464 509 aa16.27■□□□□ 0.2
SMG5-204ENST00000476954 INAVAQ3KP66 663 aa16.27■□□□□ 0.2
SMG5-204ENST00000476954 HECTD3Q5T447 861 aa16.27■□□□□ 0.2
SMG5-204ENST00000476954 KIAA1614Q5VZ46 1190 aa16.27■□□□□ 0.2
SMG5-204ENST00000476954 NT5DC4Q86YG4 428 aa16.27■□□□□ 0.2
SMG5-204ENST00000476954 ZNF248Q8NDW4 579 aa16.27■□□□□ 0.2
SMG5-204ENST00000476954 MYCBPAPQ8TBZ2 947 aa16.27■□□□□ 0.2
SMG5-204ENST00000476954 FBXO32Q969P5 355 aa16.27■□□□□ 0.2
SMG5-204ENST00000476954 ZNF518BQ9C0D4 1074 aa16.27■□□□□ 0.2
SMG5-204ENST00000476954 MARK1Q9P0L2 795 aa16.27■□□□□ 0.2
SMG5-204ENST00000476954 CLDN5O00501 218 aa16.26■□□□□ 0.19
SMG5-204ENST00000476954 FAM13AO94988 1023 aa16.26■□□□□ 0.19
SMG5-204ENST00000476954 C1SP09871 688 aa16.26■□□□□ 0.19
SMG5-204ENST00000476954 GLDCP23378 1020 aa16.26■□□□□ 0.19
SMG5-204ENST00000476954 PRKCHP24723 683 aa16.26■□□□□ 0.19
SMG5-204ENST00000476954 YWHAQP27348 245 aa16.26■□□□□ 0.19
SMG5-204ENST00000476954 GTF2BQ00403 316 aa16.26■□□□□ 0.19
SMG5-204ENST00000476954 HYIQ5T013 277 aa16.26■□□□□ 0.19
SMG5-204ENST00000476954 HS2ST1Q7LGA3 356 aa16.26■□□□□ 0.19
SMG5-204ENST00000476954 LIMS2Q7Z4I7 341 aa16.26■□□□□ 0.19
SMG5-204ENST00000476954 GPBP1Q86WP2 473 aa16.26■□□□□ 0.19
SMG5-204ENST00000476954 SCAMP5Q8TAC9 235 aa16.26■□□□□ 0.19
SMG5-204ENST00000476954 TSC1Q92574 1164 aa16.26■□□□□ 0.19
SMG5-204ENST00000476954 BIRC7Q96CA5 298 aa16.26■□□□□ 0.19
SMG5-204ENST00000476954 SAAL1Q96ER3 474 aa16.26■□□□□ 0.19
SMG5-204ENST00000476954 ORAI3Q9BRQ5 295 aa16.26■□□□□ 0.19
SMG5-204ENST00000476954 FAM213AQ9BRX8 229 aa16.26■□□□□ 0.19
SMG5-204ENST00000476954 ZHX3Q9H4I2 956 aa16.26■□□□□ 0.19
SMG5-204ENST00000476954 OSGEPQ9NPF4 335 aa16.26■□□□□ 0.19
SMG5-204ENST00000476954 KCND2Q9NZV8 630 aa16.26■□□□□ 0.19
SMG5-204ENST00000476954 THAP10Q9P2Z0 257 aaPredicted RBP16.26■□□□□ 0.19
SMG5-204ENST00000476954 TLN1Q9Y490 2541 aaKnown RBP16.25■□□□□ 0.19
SMG5-204ENST00000476954 PTPRJQ12913 1337 aa16.25■□□□□ 0.19
SMG5-204ENST00000476954 FSBPO95073 299 aa16.25■□□□□ 0.19
SMG5-204ENST00000476954 NTRK1P04629 796 aa16.25■□□□□ 0.19
SMG5-204ENST00000476954 ACADMP11310 421 aa16.25■□□□□ 0.19
SMG5-204ENST00000476954 ZNF131P52739 623 aa16.25■□□□□ 0.19
SMG5-204ENST00000476954 ENPP2Q13822 863 aa16.25■□□□□ 0.19
SMG5-204ENST00000476954 GEN1Q17RS7 908 aa16.25■□□□□ 0.19
SMG5-204ENST00000476954 BROXQ5VW32 411 aa16.25■□□□□ 0.19
SMG5-204ENST00000476954 SLFN12LQ6IEE8 588 aa16.25■□□□□ 0.19
SMG5-204ENST00000476954 HTR3DQ70Z44 454 aa16.25■□□□□ 0.19
SMG5-204ENST00000476954 POMGNT1Q8WZA1 660 aa16.25■□□□□ 0.19
SMG5-204ENST00000476954 HIC2Q96JB3 615 aa16.25■□□□□ 0.19
SMG5-204ENST00000476954 DUSP9Q99956 384 aaKnown RBP16.25■□□□□ 0.19
SMG5-204ENST00000476954 MRPL45Q9BRJ2 306 aaKnown RBP16.25■□□□□ 0.19
SMG5-204ENST00000476954 MTMR12Q9C0I1 747 aa16.25■□□□□ 0.19
SMG5-204ENST00000476954 FOXP1Q9H334 677 aaPredicted RBP16.25■□□□□ 0.19
SMG5-204ENST00000476954 WDR35Q9P2L0 1181 aa16.25■□□□□ 0.19
SMG5-204ENST00000476954 ODF2LQ9ULJ1 636 aa16.25■□□□□ 0.19
SMG5-204ENST00000476954 PCDHB1Q9Y5F3 818 aa16.25■□□□□ 0.19
SMG5-204ENST00000476954 LAD1O00515 517 aa16.24■□□□□ 0.19
SMG5-204ENST00000476954 SYNCRIPO60506 623 aaKnown RBP16.24■□□□□ 0.19
SMG5-204ENST00000476954 TBX18O95935 607 aa16.24■□□□□ 0.19
SMG5-204ENST00000476954 ACO1P21399 889 aaKnown RBP16.24■□□□□ 0.19
SMG5-204ENST00000476954 PCBP4P57723 403 aaKnown RBP16.24■□□□□ 0.19
SMG5-204ENST00000476954 RBP5P82980 135 aa16.24■□□□□ 0.19
SMG5-204ENST00000476954 NFKB2Q00653 900 aa16.24■□□□□ 0.19
SMG5-204ENST00000476954 ORC1Q13415 861 aa16.24■□□□□ 0.19
SMG5-204ENST00000476954 MAPRE1Q15691 268 aaKnown RBP16.24■□□□□ 0.19
SMG5-204ENST00000476954 TMEM119Q4V9L6 283 aa16.24■□□□□ 0.19
SMG5-204ENST00000476954 KDM7AQ6ZMT4 941 aa16.24■□□□□ 0.19
SMG5-204ENST00000476954 ADAT2Q7Z6V5 191 aaKnown RBP16.24■□□□□ 0.19
SMG5-204ENST00000476954 BRSK2Q8IWQ3 736 aa16.24■□□□□ 0.19
SMG5-204ENST00000476954 NUP93Q8N1F7 819 aa16.24■□□□□ 0.19
SMG5-204ENST00000476954 SAP25Q8TEE9 199 aa16.24■□□□□ 0.19
SMG5-204ENST00000476954 SORCS1Q8WY21 1168 aa16.24■□□□□ 0.19
SMG5-204ENST00000476954 KCNK16Q96T55 309 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms