RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 PPARAQ07869 468 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 COASYQ13057 564 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 SNTA1Q13424 505 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 PICALMQ13492 652 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 TRPC3Q13507 836 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 GALEQ14376 348 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 POU6F1Q14863 301 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 CNGA2Q16280 664 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 PPP2R5EQ16537 467 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 CYP2A13Q16696 494 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 TM4SF20Q53R12 229 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 AARS2Q5JTZ9 985 aaKnown RBP4.29□□□□□ -1.72
CD55-208ENST00000476590 HP1BP3Q5SSJ5 553 aaPredicted RBP4.29□□□□□ -1.72
CD55-208ENST00000476590 USPL1Q5W0Q7 1092 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 GTF2IRD2BQ6EKJ0 949 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 OGFOD2Q6N063 350 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 BTNL9Q6UXG8 535 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 USP50Q70EL3 339 aaPredicted RBP4.29□□□□□ -1.72
CD55-208ENST00000476590 CYB5R4Q7L1T6 521 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 ARPINQ7Z6K5 226 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 MILR1Q7Z6M3 343 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 ADGRG6Q86SQ4 1221 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 GTF2IRD2Q86UP8 949 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 NLRP10Q86W26 655 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 COL23A1Q86Y22 540 aaPredicted RBP4.29□□□□□ -1.72
CD55-208ENST00000476590 SLC44A2Q8IWA5 706 aaPredicted RBP4.29□□□□□ -1.72
CD55-208ENST00000476590 PM20D2Q8IYS1 436 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 LRRC47Q8N1G4 583 aaKnown RBP4.29□□□□□ -1.72
CD55-208ENST00000476590 LRRC71Q8N4P6 559 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 ATAD1Q8NBU5 361 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 DTX3LQ8TDB6 740 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 SLC2A14Q8TDB8 520 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 U2AF1L4Q8WU68 220 aaKnown RBP4.29□□□□□ -1.72
CD55-208ENST00000476590 KBTBD7Q8WVZ9 684 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 FATE1Q969F0 183 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 FAM89AQ96GI7 184 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 BTBD9Q96Q07 612 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 MED15Q96RN5 788 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 TUBB6Q9BUF5 446 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 C9orf16Q9BUW7 83 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 SARGQ9BW04 601 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 TARS2Q9BW92 718 aaKnown RBP4.29□□□□□ -1.72
CD55-208ENST00000476590 TDRD1Q9BXT4 1180 aaKnown RBP4.29□□□□□ -1.72
CD55-208ENST00000476590 GON7Q9BXV9 100 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 OR2B2Q9GZK3 357 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 WNT8AQ9H1J5 351 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 KCTD10Q9H3F6 313 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 UCK1Q9HA47 277 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 MRM3Q9HC36 420 aaKnown RBP4.29□□□□□ -1.72
CD55-208ENST00000476590 CYP4F12Q9HCS2 524 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 SAR1AQ9NR31 198 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 INTS7Q9NVH2 962 aaKnown RBP4.29□□□□□ -1.72
CD55-208ENST00000476590 CEP72Q9P209 647 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 FAM8A1Q9UBU6 413 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 MALT1Q9UDY8 824 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 FBXO10Q9UK96 956 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.29□□□□□ -1.72
CD55-208ENST00000476590 PA2G4Q9UQ80 394 aaKnown RBP4.29□□□□□ -1.72
CD55-208ENST00000476590 HCN4Q9Y3Q4 1203 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 PTCH2Q9Y6C5 1203 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 DGKBQ9Y6T7 804 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 N4BP2Q86UW6 1770 aaPredicted RBP4.29□□□□□ -1.72
CD55-208ENST00000476590 TROQ12816 1431 aaPredicted RBP4.29□□□□□ -1.72
CD55-208ENST00000476590 PITPNM2Q9BZ72 1349 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 PCDH11YQ9BZA8 1340 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 KDM3AQ9Y4C1 1321 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 ZNF518AQ6AHZ1 1483 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 EVPLLA8MZ36 301 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 H0Y858 1186 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 STMND1H3BQB6 276 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 H3BSA7 217 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 TOR1BO14657 336 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 TEX33O43247 280 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 NUAK1O60285 661 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 PHF2O75151 1096 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 ZWINTO95229 277 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 TNFAIP8O95379 198 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 APBB3O95704 486 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 SLC4A1P02730 911 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 FDX1P10109 184 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 MYBP10242 640 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 DBTP11182 482 aaKnown RBP4.29□□□□□ -1.72
CD55-208ENST00000476590 POU2F1P14859 743 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 ITGA2P17301 1181 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 CYP3A5P20815 502 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 CMA1P23946 247 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 MAGEA11P43364 429 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 RAC1P63000 192 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 TNNC1P63316 161 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 GABREP78334 506 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 ITKQ08881 620 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 MGAT5Q09328 741 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 IFIT5Q13325 482 aaKnown RBP4.29□□□□□ -1.72
CD55-208ENST00000476590 AP3B2Q13367 1082 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 RFTN1Q14699 578 aaPredicted RBP4.29□□□□□ -1.72
CD55-208ENST00000476590 DGKDQ16760 1214 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 DUSP7Q16829 419 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 ZNF792Q3KQV3 632 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 USP41Q3LFD5 358 aa4.29□□□□□ -1.72
CD55-208ENST00000476590 MMEL1Q495T6 779 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms