RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 TTPALQ9BTX7 342 aa6.82□□□□□ -1.32
VPS50-212ENST00000476413 WDR11Q9BZH6 1224 aa6.82□□□□□ -1.32
VPS50-212ENST00000476413 ABHD16BQ9H3Z7 469 aa6.82□□□□□ -1.32
VPS50-212ENST00000476413 NRDE2Q9H7Z3 1164 aa6.82□□□□□ -1.32
VPS50-212ENST00000476413 PRDM16Q9HAZ2 1276 aa6.82□□□□□ -1.32
VPS50-212ENST00000476413 RXFP3Q9NSD7 469 aa6.82□□□□□ -1.32
VPS50-212ENST00000476413 NKX1-2Q9UD57 310 aaPredicted RBP6.82□□□□□ -1.32
VPS50-212ENST00000476413 TESQ9UGI8 421 aaKnown RBP6.82□□□□□ -1.32
VPS50-212ENST00000476413 ASAP1Q9ULH1 1129 aa6.82□□□□□ -1.32
VPS50-212ENST00000476413 CRYL1Q9Y2S2 319 aa6.82□□□□□ -1.32
VPS50-212ENST00000476413 MPPED1O15442 326 aa6.81□□□□□ -1.32
VPS50-212ENST00000476413 PMPCBO75439 489 aa6.81□□□□□ -1.32
VPS50-212ENST00000476413 DRD1P21728 446 aa6.81□□□□□ -1.32
VPS50-212ENST00000476413 CTGFP29279 349 aa6.81□□□□□ -1.32
VPS50-212ENST00000476413 GKP32189 559 aa6.81□□□□□ -1.32
VPS50-212ENST00000476413 PTGS2P35354 604 aa6.81□□□□□ -1.32
VPS50-212ENST00000476413 ACTR2P61160 394 aa6.81□□□□□ -1.32
VPS50-212ENST00000476413 DEUP1Q05D60 604 aa6.81□□□□□ -1.32
VPS50-212ENST00000476413 SMAD1Q15797 465 aaKnown RBP6.81□□□□□ -1.32
VPS50-212ENST00000476413 INTS11Q5TA45 600 aaKnown RBP6.81□□□□□ -1.32
VPS50-212ENST00000476413 CCDC144NLQ6NUI1 221 aa6.81□□□□□ -1.32
VPS50-212ENST00000476413 ANKS1BQ7Z6G8 1248 aa6.81□□□□□ -1.32
VPS50-212ENST00000476413 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.81□□□□□ -1.32
VPS50-212ENST00000476413 TEX19Q8NA77 164 aa6.81□□□□□ -1.32
VPS50-212ENST00000476413 C3orf49Q96BT1 292 aa6.81□□□□□ -1.32
VPS50-212ENST00000476413 SEPSECSQ9HD40 501 aaKnown RBP6.81□□□□□ -1.32
VPS50-212ENST00000476413 KCNK9Q9NPC2 374 aa6.81□□□□□ -1.32
VPS50-212ENST00000476413 EHD3Q9NZN3 535 aa6.81□□□□□ -1.32
VPS50-212ENST00000476413 ZBTB1Q9Y2K1 713 aa6.81□□□□□ -1.32
VPS50-212ENST00000476413 SLC38A8A6NNN8 435 aa6.8□□□□□ -1.32
VPS50-212ENST00000476413 M0QYT0 321 aa6.8□□□□□ -1.32
VPS50-212ENST00000476413 ONECUT2O95948 504 aa6.8□□□□□ -1.32
VPS50-212ENST00000476413 FOLR3P41439 243 aa6.8□□□□□ -1.32
VPS50-212ENST00000476413 CCR5P51681 352 aa6.8□□□□□ -1.32
VPS50-212ENST00000476413 FAM3BP58499 235 aaPredicted RBP6.8□□□□□ -1.32
VPS50-212ENST00000476413 SF3A3Q12874 501 aaKnown RBP eCLIP6.8□□□□□ -1.32
VPS50-212ENST00000476413 ST3GAL2Q16842 350 aa6.8□□□□□ -1.32
VPS50-212ENST00000476413 MIIPQ5JXC2 388 aa6.8□□□□□ -1.32
VPS50-212ENST00000476413 ERICH6BQ5W0A0 696 aa6.8□□□□□ -1.32
VPS50-212ENST00000476413 TTC30AQ86WT1 665 aa6.8□□□□□ -1.32
VPS50-212ENST00000476413 RAB11FIP4Q86YS3 637 aa6.8□□□□□ -1.32
VPS50-212ENST00000476413 LRRC71Q8N4P6 559 aa6.8□□□□□ -1.32
VPS50-212ENST00000476413 PROKR1Q8TCW9 393 aa6.8□□□□□ -1.32
VPS50-212ENST00000476413 XAGE5Q8WWM1 108 aa6.8□□□□□ -1.32
VPS50-212ENST00000476413 FBXL20Q96IG2 436 aa6.8□□□□□ -1.32
VPS50-212ENST00000476413 PPM1MQ96MI6 270 aa6.8□□□□□ -1.32
VPS50-212ENST00000476413 KCND3Q9UK17 655 aa6.8□□□□□ -1.32
VPS50-212ENST00000476413 NFU1Q9UMS0 254 aa6.8□□□□□ -1.32
VPS50-212ENST00000476413 PCDHB7Q9Y5E2 793 aa6.8□□□□□ -1.32
VPS50-212ENST00000476413 EFCAB8A8MWE9 144 aa6.79□□□□□ -1.32
VPS50-212ENST00000476413 PRRT4C9JH25 899 aa6.79□□□□□ -1.32
VPS50-212ENST00000476413 E7EVH7 732 aa6.79□□□□□ -1.32
VPS50-212ENST00000476413 TJP3O95049 919 aa6.79□□□□□ -1.32
VPS50-212ENST00000476413 ZFXP17010 805 aaPredicted RBP6.79□□□□□ -1.32
VPS50-212ENST00000476413 SERPINA4P29622 427 aa6.79□□□□□ -1.32
VPS50-212ENST00000476413 AARSP49588 968 aaKnown RBP eCLIP6.79□□□□□ -1.32
VPS50-212ENST00000476413 PAPOLAP51003 745 aaKnown RBP6.79□□□□□ -1.32
VPS50-212ENST00000476413 E2F1Q01094 437 aa6.79□□□□□ -1.32
VPS50-212ENST00000476413 FOXE3Q13461 319 aa6.79□□□□□ -1.32
VPS50-212ENST00000476413 TUBA3CQ13748 450 aa6.79□□□□□ -1.32
VPS50-212ENST00000476413 BMPR2Q13873 1038 aa6.79□□□□□ -1.32
VPS50-212ENST00000476413 ANKRD45Q5TZF3 282 aa6.79□□□□□ -1.32
VPS50-212ENST00000476413 TUBA3EQ6PEY2 450 aa6.79□□□□□ -1.32
VPS50-212ENST00000476413 KCNV1Q6PIU1 500 aa6.79□□□□□ -1.32
VPS50-212ENST00000476413 NAXEQ8NCW5 288 aa6.79□□□□□ -1.32
VPS50-212ENST00000476413 OVCA2Q8WZ82 227 aa6.79□□□□□ -1.32
VPS50-212ENST00000476413 TFAP2BQ92481 460 aa6.79□□□□□ -1.32
VPS50-212ENST00000476413 NPIPB3Q92617 1050 aa6.79□□□□□ -1.32
VPS50-212ENST00000476413 PRR11Q96HE9 360 aaPredicted RBP6.79□□□□□ -1.32
VPS50-212ENST00000476413 COG8Q96MW5 612 aa6.79□□□□□ -1.32
VPS50-212ENST00000476413 TWNKQ96RR1 684 aa6.79□□□□□ -1.32
VPS50-212ENST00000476413 RASSF1Q9NS23 344 aa6.79□□□□□ -1.32
VPS50-212ENST00000476413 TMEM160Q9NX00 188 aa6.79□□□□□ -1.32
VPS50-212ENST00000476413 SYBUQ9NX95 663 aa6.79□□□□□ -1.32
VPS50-212ENST00000476413 NDUFAF4Q9P032 175 aa6.79□□□□□ -1.32
VPS50-212ENST00000476413 IFT80Q9P2H3 777 aaPredicted RBP6.79□□□□□ -1.32
VPS50-212ENST00000476413 MAST3O60307 1309 aa6.78□□□□□ -1.32
VPS50-212ENST00000476413 PSMD9O00233 223 aa6.78□□□□□ -1.32
VPS50-212ENST00000476413 CA12O43570 354 aa6.78□□□□□ -1.32
VPS50-212ENST00000476413 PEX1O43933 1283 aa6.78□□□□□ -1.32
VPS50-212ENST00000476413 ALADP13716 330 aa6.78□□□□□ -1.32
VPS50-212ENST00000476413 GSTM5P46439 218 aa6.78□□□□□ -1.32
VPS50-212ENST00000476413 TBX2Q13207 712 aaPredicted RBP6.78□□□□□ -1.32
VPS50-212ENST00000476413 DNASE1L3Q13609 305 aa6.78□□□□□ -1.32
VPS50-212ENST00000476413 SIM2Q14190 667 aaPredicted RBP6.78□□□□□ -1.32
VPS50-212ENST00000476413 P3H1Q32P28 736 aa6.78□□□□□ -1.32
VPS50-212ENST00000476413 DGAT2L7PQ6IED9 249 aa6.78□□□□□ -1.32
VPS50-212ENST00000476413 C16orf89Q6UX73 402 aa6.78□□□□□ -1.32
VPS50-212ENST00000476413 Q6ZWC4 215 aa6.78□□□□□ -1.32
VPS50-212ENST00000476413 USP51Q70EK9 711 aa6.78□□□□□ -1.32
VPS50-212ENST00000476413 SYT13Q7L8C5 426 aa6.78□□□□□ -1.32
VPS50-212ENST00000476413 HMGB4Q8WW32 186 aa6.78□□□□□ -1.32
VPS50-212ENST00000476413 CPT1BQ92523 772 aa6.78□□□□□ -1.32
VPS50-212ENST00000476413 MPP4Q96JB8 637 aa6.78□□□□□ -1.32
VPS50-212ENST00000476413 MAELQ96JY0 434 aaKnown RBP6.78□□□□□ -1.32
VPS50-212ENST00000476413 BRD8Q9H0E9 1235 aa6.78□□□□□ -1.32
VPS50-212ENST00000476413 SAP30LQ9HAJ7 183 aa6.78□□□□□ -1.32
VPS50-212ENST00000476413 WASH6PQ9NQA3 447 aa6.78□□□□□ -1.32
VPS50-212ENST00000476413 J3KRW8 73 aa6.77□□□□□ -1.33
VPS50-212ENST00000476413 AP4M1O00189 453 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms