RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 SIX6OS1Q8N1H7 587 aa5.17□□□□□ -1.58
CCDC39-204ENST00000476379 PDZD8Q8NEN9 1154 aa5.17□□□□□ -1.58
CCDC39-204ENST00000476379 GPRC5AQ8NFJ5 357 aa5.17□□□□□ -1.58
CCDC39-204ENST00000476379 HELQQ8TDG4 1101 aa5.17□□□□□ -1.58
CCDC39-204ENST00000476379 AFG1LQ8WV93 481 aa5.17□□□□□ -1.58
CCDC39-204ENST00000476379 PTPRN2Q92932 1015 aa5.17□□□□□ -1.58
CCDC39-204ENST00000476379 PHF21BQ96EK2 531 aa5.17□□□□□ -1.58
CCDC39-204ENST00000476379 HPDLQ96IR7 371 aa5.17□□□□□ -1.58
CCDC39-204ENST00000476379 MS4A4AQ96JQ5 239 aa5.17□□□□□ -1.58
CCDC39-204ENST00000476379 FGD4Q96M96 766 aa5.17□□□□□ -1.58
CCDC39-204ENST00000476379 SRPK1Q96SB4 655 aaKnown RBP5.17□□□□□ -1.58
CCDC39-204ENST00000476379 DCUN1D5Q9BTE7 237 aa5.17□□□□□ -1.58
CCDC39-204ENST00000476379 KLC2Q9H0B6 622 aa5.17□□□□□ -1.58
CCDC39-204ENST00000476379 VCX3BQ9H321 246 aa5.17□□□□□ -1.58
CCDC39-204ENST00000476379 SNX25Q9H3E2 840 aa5.17□□□□□ -1.58
CCDC39-204ENST00000476379 UTP6Q9NYH9 597 aaKnown RBP5.17□□□□□ -1.58
CCDC39-204ENST00000476379 CLIC5Q9NZA1 410 aa5.17□□□□□ -1.58
CCDC39-204ENST00000476379 STOML1Q9UBI4 398 aa5.17□□□□□ -1.58
CCDC39-204ENST00000476379 CHKBQ9Y259 395 aa5.17□□□□□ -1.58
CCDC39-204ENST00000476379 CNTNAP2Q9UHC6 1331 aa5.17□□□□□ -1.58
CCDC39-204ENST00000476379 CDK5RAP2Q96SN8 1893 aa5.16□□□□□ -1.58
CCDC39-204ENST00000476379 MYADML2A6NDP7 307 aa5.16□□□□□ -1.58
CCDC39-204ENST00000476379 PIK3CDO00329 1044 aa5.16□□□□□ -1.58
CCDC39-204ENST00000476379 TBX3O15119 743 aa5.16□□□□□ -1.58
CCDC39-204ENST00000476379 ADCY6O43306 1168 aa5.16□□□□□ -1.58
CCDC39-204ENST00000476379 CCR10P46092 362 aa5.16□□□□□ -1.58
CCDC39-204ENST00000476379 GSSP48637 474 aa5.16□□□□□ -1.58
CCDC39-204ENST00000476379 FNTAP49354 379 aa5.16□□□□□ -1.58
CCDC39-204ENST00000476379 NDST1P52848 882 aa5.16□□□□□ -1.58
CCDC39-204ENST00000476379 JAM2P57087 298 aa5.16□□□□□ -1.58
CCDC39-204ENST00000476379 OGDHQ02218 1023 aa5.16□□□□□ -1.58
CCDC39-204ENST00000476379 STX3Q13277 289 aa5.16□□□□□ -1.58
CCDC39-204ENST00000476379 ZNF460Q14592 562 aa5.16□□□□□ -1.58
CCDC39-204ENST00000476379 POU6F1Q14863 301 aa5.16□□□□□ -1.58
CCDC39-204ENST00000476379 KIF19Q2TAC6 998 aa5.16□□□□□ -1.58
CCDC39-204ENST00000476379 FUT11Q495W5 492 aa5.16□□□□□ -1.58
CCDC39-204ENST00000476379 KCTD21Q4G0X4 260 aa5.16□□□□□ -1.58
CCDC39-204ENST00000476379 PTPN20Q4JDL3 420 aa5.16□□□□□ -1.58
CCDC39-204ENST00000476379 HSP90AA5PQ58FG0 334 aa5.16□□□□□ -1.58
CCDC39-204ENST00000476379 RALGPS1Q5JS13 557 aa5.16□□□□□ -1.58
CCDC39-204ENST00000476379 ARHGAP17Q68EM7 881 aa5.16□□□□□ -1.58
CCDC39-204ENST00000476379 JADE1Q6IE81 842 aa5.16□□□□□ -1.58
CCDC39-204ENST00000476379 CEP128Q6ZU80 1094 aa5.16□□□□□ -1.58
CCDC39-204ENST00000476379 WDR75Q8IWA0 830 aaKnown RBP5.16□□□□□ -1.58
CCDC39-204ENST00000476379 FAM71AQ8IYT1 594 aa5.16□□□□□ -1.58
CCDC39-204ENST00000476379 DEFB107AQ8IZN7 70 aa5.16□□□□□ -1.58
CCDC39-204ENST00000476379 MIER2Q8N344 545 aa5.16□□□□□ -1.58
CCDC39-204ENST00000476379 SLC7A14Q8TBB6 771 aa5.16□□□□□ -1.58
CCDC39-204ENST00000476379 ATXN2LQ8WWM7 1075 aaKnown RBP5.16□□□□□ -1.58
CCDC39-204ENST00000476379 PABPC5Q96DU9 382 aaKnown RBP5.16□□□□□ -1.58
CCDC39-204ENST00000476379 CATSPER2Q96P56 530 aa5.16□□□□□ -1.58
CCDC39-204ENST00000476379 CPXM1Q96SM3 734 aa5.16□□□□□ -1.58
CCDC39-204ENST00000476379 FERMT1Q9BQL6 677 aa5.16□□□□□ -1.58
CCDC39-204ENST00000476379 MRPL4Q9BYD3 311 aaKnown RBP5.16□□□□□ -1.58
CCDC39-204ENST00000476379 ABCG8Q9H221 673 aa5.16□□□□□ -1.58
CCDC39-204ENST00000476379 TASP1Q9H6P5 420 aa5.16□□□□□ -1.58
CCDC39-204ENST00000476379 WDR55Q9H6Y2 383 aaPredicted RBP5.16□□□□□ -1.58
CCDC39-204ENST00000476379 CREBZFQ9NS37 354 aa5.16□□□□□ -1.58
CCDC39-204ENST00000476379 TSPAN16Q9UKR8 245 aa5.16□□□□□ -1.58
CCDC39-204ENST00000476379 LTBP3Q9NS15 1303 aa5.16□□□□□ -1.58
CCDC39-204ENST00000476379 MYH7BA7E2Y1 1941 aa5.16□□□□□ -1.58
CCDC39-204ENST00000476379 UBA6A0AVT1 1052 aaPredicted RBP5.16□□□□□ -1.58
CCDC39-204ENST00000476379 DPPA5A6NC42 116 aa5.16□□□□□ -1.58
CCDC39-204ENST00000476379 PRR5-ARHGAP8B1AHC4 643 aa5.16□□□□□ -1.58
CCDC39-204ENST00000476379 PAPSS1O43252 624 aaPredicted RBP5.16□□□□□ -1.58
CCDC39-204ENST00000476379 EXTL3O43909 919 aa5.16□□□□□ -1.58
CCDC39-204ENST00000476379 TBC1D12O60347 775 aa5.16□□□□□ -1.58
CCDC39-204ENST00000476379 ACO1P21399 889 aaKnown RBP5.16□□□□□ -1.58
CCDC39-204ENST00000476379 MGAT1P26572 445 aa5.16□□□□□ -1.58
CCDC39-204ENST00000476379 CLK2P49760 499 aaKnown RBP5.16□□□□□ -1.58
CCDC39-204ENST00000476379 ARHGAP8P85298 464 aa5.16□□□□□ -1.58
CCDC39-204ENST00000476379 BST1Q10588 318 aa5.16□□□□□ -1.58
CCDC39-204ENST00000476379 XKR3Q5GH77 459 aa5.16□□□□□ -1.58
CCDC39-204ENST00000476379 GNASQ5JWF2 1037 aa5.16□□□□□ -1.58
CCDC39-204ENST00000476379 SDHAF4Q5VUM1 108 aa5.16□□□□□ -1.58
CCDC39-204ENST00000476379 SCIMPQ6UWF3 145 aa5.16□□□□□ -1.58
CCDC39-204ENST00000476379 GPR142Q7Z601 462 aa5.16□□□□□ -1.58
CCDC39-204ENST00000476379 LDB1Q86U70 411 aaPredicted RBP5.16□□□□□ -1.58
CCDC39-204ENST00000476379 TEX9Q8N6V9 391 aa5.16□□□□□ -1.58
CCDC39-204ENST00000476379 PCDH20Q8N6Y1 951 aaKnown RBP5.16□□□□□ -1.58
CCDC39-204ENST00000476379 BBOF1Q8ND07 529 aa5.16□□□□□ -1.58
CCDC39-204ENST00000476379 FBXO27Q8NI29 283 aa5.16□□□□□ -1.58
CCDC39-204ENST00000476379 CXorf38Q8TB03 319 aa5.16□□□□□ -1.58
CCDC39-204ENST00000476379 GPR152Q8TDT2 470 aa5.16□□□□□ -1.58
CCDC39-204ENST00000476379 SHC3Q92529 594 aa5.16□□□□□ -1.58
CCDC39-204ENST00000476379 SERPINB12Q96P63 405 aa5.16□□□□□ -1.58
CCDC39-204ENST00000476379 DEFB118Q96PH6 123 aa5.16□□□□□ -1.58
CCDC39-204ENST00000476379 HBEGFQ99075 208 aa5.16□□□□□ -1.58
CCDC39-204ENST00000476379 NUF2Q9BZD4 464 aa5.16□□□□□ -1.58
CCDC39-204ENST00000476379 TRIM8Q9BZR9 551 aa5.16□□□□□ -1.58
CCDC39-204ENST00000476379 NIF3L1Q9GZT8 377 aa5.16□□□□□ -1.58
CCDC39-204ENST00000476379 RXFP1Q9HBX9 757 aa5.16□□□□□ -1.58
CCDC39-204ENST00000476379 SETD4Q9NVD3 440 aa5.16□□□□□ -1.58
CCDC39-204ENST00000476379 HOXC10Q9NYD6 342 aa5.16□□□□□ -1.58
CCDC39-204ENST00000476379 TLK1Q9UKI8 766 aa5.16□□□□□ -1.58
CCDC39-204ENST00000476379 LTBP1Q14766 1721 aa5.16□□□□□ -1.58
CCDC39-204ENST00000476379 TTC24A2A3L6 582 aaPredicted RBP5.16□□□□□ -1.58
CCDC39-204ENST00000476379 SOWAHBA6NEL2 793 aa5.16□□□□□ -1.58
CCDC39-204ENST00000476379 CCDC85CA6NKD9 419 aa5.16□□□□□ -1.58
CCDC39-204ENST00000476379 A8MX80 341 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms