RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 M0R3H8 397 aa5.76□□□□□ -1.49
PTCD3-211ENST00000476215 ASNA1O43681 348 aa5.76□□□□□ -1.49
PTCD3-211ENST00000476215 PROP1O75360 226 aa5.76□□□□□ -1.49
PTCD3-211ENST00000476215 PDE8BO95263 885 aa5.76□□□□□ -1.49
PTCD3-211ENST00000476215 TNFRSF6BO95407 300 aa5.76□□□□□ -1.49
PTCD3-211ENST00000476215 GLP2RO95838 553 aa5.76□□□□□ -1.49
PTCD3-211ENST00000476215 NPPBP16860 134 aa5.76□□□□□ -1.49
PTCD3-211ENST00000476215 CHKAP35790 457 aa5.76□□□□□ -1.49
PTCD3-211ENST00000476215 PBX1P40424 430 aa5.76□□□□□ -1.49
PTCD3-211ENST00000476215 C21orf58P58505 322 aa5.76□□□□□ -1.49
PTCD3-211ENST00000476215 PTK2BQ14289 1009 aa5.76□□□□□ -1.49
PTCD3-211ENST00000476215 ACOX1Q15067 660 aa5.76□□□□□ -1.49
PTCD3-211ENST00000476215 PDCD2Q16342 344 aaPredicted RBP5.76□□□□□ -1.49
PTCD3-211ENST00000476215 P3H1Q32P28 736 aa5.76□□□□□ -1.49
PTCD3-211ENST00000476215 MTHFD1LQ6UB35 978 aa5.76□□□□□ -1.49
PTCD3-211ENST00000476215 NAPRTQ6XQN6 538 aa5.76□□□□□ -1.49
PTCD3-211ENST00000476215 SLC29A4Q7RTT9 530 aa5.76□□□□□ -1.49
PTCD3-211ENST00000476215 ZNF804AQ7Z570 1209 aa5.76□□□□□ -1.49
PTCD3-211ENST00000476215 TTC30AQ86WT1 665 aa5.76□□□□□ -1.49
PTCD3-211ENST00000476215 GATAD2AQ86YP4 633 aa5.76□□□□□ -1.49
PTCD3-211ENST00000476215 P3H2Q8IVL5 708 aa5.76□□□□□ -1.49
PTCD3-211ENST00000476215 NGDNQ8NEJ9 315 aaKnown RBP5.76□□□□□ -1.49
PTCD3-211ENST00000476215 CTHRC1Q96CG8 243 aa5.76□□□□□ -1.49
PTCD3-211ENST00000476215 RMDN3Q96TC7 470 aa5.76□□□□□ -1.49
PTCD3-211ENST00000476215 PPCSQ9HAB8 311 aa5.76□□□□□ -1.49
PTCD3-211ENST00000476215 TMEM8AQ9HCN3 771 aa5.76□□□□□ -1.49
PTCD3-211ENST00000476215 HELLSQ9NRZ9 838 aa5.76□□□□□ -1.49
PTCD3-211ENST00000476215 ASB6Q9NWX5 421 aa5.76□□□□□ -1.49
PTCD3-211ENST00000476215 MGAT4CQ9UBM8 478 aa5.76□□□□□ -1.49
PTCD3-211ENST00000476215 hCG_1642624A0A1W2PR95 340 aa5.75□□□□□ -1.49
PTCD3-211ENST00000476215 SYT5O00445 386 aa5.75□□□□□ -1.49
PTCD3-211ENST00000476215 TRIM38O00635 465 aa5.75□□□□□ -1.49
PTCD3-211ENST00000476215 PCDH17O14917 1159 aa5.75□□□□□ -1.49
PTCD3-211ENST00000476215 TMPRSS11DO60235 418 aa5.75□□□□□ -1.49
PTCD3-211ENST00000476215 NBNO60934 754 aa5.75□□□□□ -1.49
PTCD3-211ENST00000476215 FGAP02671 866 aa5.75□□□□□ -1.49
PTCD3-211ENST00000476215 DRD1P21728 446 aa5.75□□□□□ -1.49
PTCD3-211ENST00000476215 FPR3P25089 353 aa5.75□□□□□ -1.49
PTCD3-211ENST00000476215 CD38P28907 300 aa5.75□□□□□ -1.49
PTCD3-211ENST00000476215 MCM5P33992 734 aa5.75□□□□□ -1.49
PTCD3-211ENST00000476215 ALDH18A1P54886 795 aaKnown RBP5.75□□□□□ -1.49
PTCD3-211ENST00000476215 PSG6Q00889 435 aa5.75□□□□□ -1.49
PTCD3-211ENST00000476215 MTAPQ13126 283 aa5.75□□□□□ -1.49
PTCD3-211ENST00000476215 TMEM196Q5HYL7 178 aa5.75□□□□□ -1.49
PTCD3-211ENST00000476215 ANO1Q5XXA6 986 aa5.75□□□□□ -1.49
PTCD3-211ENST00000476215 DENND2CQ68D51 928 aa5.75□□□□□ -1.49
PTCD3-211ENST00000476215 BOLLQ8N9W6 283 aaKnown RBP5.75□□□□□ -1.49
PTCD3-211ENST00000476215 TBC1D5Q92609 795 aa5.75□□□□□ -1.49
PTCD3-211ENST00000476215 LTV1Q96GA3 475 aaPredicted RBP5.75□□□□□ -1.49
PTCD3-211ENST00000476215 UROC1Q96N76 676 aa5.75□□□□□ -1.49
PTCD3-211ENST00000476215 SNX15Q9NRS6 342 aa5.75□□□□□ -1.49
PTCD3-211ENST00000476215 DACT1Q9NYF0 836 aa5.75□□□□□ -1.49
PTCD3-211ENST00000476215 PNMA6EA0A0J9YXQ4 647 aa5.74□□□□□ -1.49
PTCD3-211ENST00000476215 ACKR2O00590 384 aa5.74□□□□□ -1.49
PTCD3-211ENST00000476215 CA12O43570 354 aa5.74□□□□□ -1.49
PTCD3-211ENST00000476215 CBFA2T3O75081 653 aa5.74□□□□□ -1.49
PTCD3-211ENST00000476215 NTSR2O95665 410 aa5.74□□□□□ -1.49
PTCD3-211ENST00000476215 HNRNPCP07910 306 aaKnown RBP eCLIP5.74□□□□□ -1.492e-6■□□□□ 11.2
PTCD3-211ENST00000476215 MYCLP12524 364 aaPredicted RBP5.74□□□□□ -1.49
PTCD3-211ENST00000476215 WT1P19544 449 aaPredicted RBP5.74□□□□□ -1.49
PTCD3-211ENST00000476215 ADRA1DP25100 572 aa5.74□□□□□ -1.49
PTCD3-211ENST00000476215 ITPKBP27987 946 aa5.74□□□□□ -1.49
PTCD3-211ENST00000476215 SERPINF1P36955 418 aa5.74□□□□□ -1.49
PTCD3-211ENST00000476215 DIO1P49895 249 aa5.74□□□□□ -1.49
PTCD3-211ENST00000476215 DEUP1Q05D60 604 aa5.74□□□□□ -1.49
PTCD3-211ENST00000476215 BFSP2Q13515 415 aa5.74□□□□□ -1.49
PTCD3-211ENST00000476215 GRHL2Q6ISB3 625 aa5.74□□□□□ -1.49
PTCD3-211ENST00000476215 TLDC1Q6P9B6 456 aa5.74□□□□□ -1.49
PTCD3-211ENST00000476215 AMIGO2Q86SJ2 522 aa5.74□□□□□ -1.49
PTCD3-211ENST00000476215 MYCT1Q8N699 235 aa5.74□□□□□ -1.49
PTCD3-211ENST00000476215 TIMP4Q99727 224 aa5.74□□□□□ -1.49
PTCD3-211ENST00000476215 MACROD1Q9BQ69 325 aa5.74□□□□□ -1.49
PTCD3-211ENST00000476215 NUDT22Q9BRQ3 303 aa5.74□□□□□ -1.49
PTCD3-211ENST00000476215 KLK15Q9H2R5 256 aa5.74□□□□□ -1.49
PTCD3-211ENST00000476215 ASAP1Q9ULH1 1129 aa5.74□□□□□ -1.49
PTCD3-211ENST00000476215 SCAF8Q9UPN6 1271 aaKnown RBP5.74□□□□□ -1.49
PTCD3-211ENST00000476215 FCHO1O14526 889 aa5.73□□□□□ -1.49
PTCD3-211ENST00000476215 DNPH1O43598 174 aa5.73□□□□□ -1.49
PTCD3-211ENST00000476215 EXOC3O60645 756 aa5.73□□□□□ -1.49
PTCD3-211ENST00000476215 EIF3JO75822 258 aaKnown RBP5.73□□□□□ -1.49
PTCD3-211ENST00000476215 IGLV2-14P01704 120 aa5.73□□□□□ -1.49
PTCD3-211ENST00000476215 ANXA6P08133 673 aa5.73□□□□□ -1.49
PTCD3-211ENST00000476215 ITGA5P08648 1049 aa5.73□□□□□ -1.49
PTCD3-211ENST00000476215 GPD1P21695 349 aa5.73□□□□□ -1.49
PTCD3-211ENST00000476215 GSTM5P46439 218 aa5.73□□□□□ -1.49
PTCD3-211ENST00000476215 PTH2RP49190 550 aa5.73□□□□□ -1.49
PTCD3-211ENST00000476215 DGKQP52824 942 aa5.73□□□□□ -1.49
PTCD3-211ENST00000476215 CYP4F2P78329 520 aa5.73□□□□□ -1.49
PTCD3-211ENST00000476215 LMAN2Q12907 356 aa5.73□□□□□ -1.49
PTCD3-211ENST00000476215 CSHL1Q14406 222 aa5.73□□□□□ -1.49
PTCD3-211ENST00000476215 GRM4Q14833 912 aa5.73□□□□□ -1.49
PTCD3-211ENST00000476215 TRIM71Q2Q1W2 868 aaKnown RBP5.73□□□□□ -1.49
PTCD3-211ENST00000476215 AASDHQ4L235 1098 aaPredicted RBP5.73□□□□□ -1.49
PTCD3-211ENST00000476215 RNASE12Q5GAN4 147 aaKnown RBP5.73□□□□□ -1.49
PTCD3-211ENST00000476215 CEP85Q6P2H3 762 aa5.73□□□□□ -1.49
PTCD3-211ENST00000476215 KIRREL2Q6UWL6 708 aa5.73□□□□□ -1.49
PTCD3-211ENST00000476215 ARHGEF25Q86VW2 580 aa5.73□□□□□ -1.49
PTCD3-211ENST00000476215 SFTPA1Q8IWL2 248 aa5.73□□□□□ -1.49
PTCD3-211ENST00000476215 CACNA2D3Q8IZS8 1091 aa5.73□□□□□ -1.49
PTCD3-211ENST00000476215 CCT6BQ92526 530 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms