RNA–Protein interactions for RNA: ENST00000475728.5

ABCF3-211, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 503 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-211ENST00000475728 TMEM110Q86TL2 294 aa15.13■□□□□ 0.01
ABCF3-211ENST00000475728 ZNF677Q86XU0 584 aa15.13■□□□□ 0.01
ABCF3-211ENST00000475728 MIB1Q86YT6 1006 aa15.13■□□□□ 0.01
ABCF3-211ENST00000475728 MSANTD4Q8NCY6 345 aa15.13■□□□□ 0.01
ABCF3-211ENST00000475728 CCDC26Q8TAB7 109 aa15.13■□□□□ 0.01
ABCF3-211ENST00000475728 MIS12Q9H081 205 aa15.13■□□□□ 0.01
ABCF3-211ENST00000475728 LINC00597Q9H2U6 94 aa15.13■□□□□ 0.01
ABCF3-211ENST00000475728 RTN4Q9NQC3 1192 aaKnown RBP15.13■□□□□ 0.01
ABCF3-211ENST00000475728 HBS1LQ9Y450 684 aaKnown RBP15.13■□□□□ 0.01
ABCF3-211ENST00000475728 F5P12259 2224 aa15.13■□□□□ 0.01
ABCF3-211ENST00000475728 TRDMT1O14717 391 aaKnown RBP15.12■□□□□ 0.01
ABCF3-211ENST00000475728 LSM8O95777 96 aaKnown RBP15.12■□□□□ 0.01
ABCF3-211ENST00000475728 LTFP02788 710 aa15.12■□□□□ 0.01
ABCF3-211ENST00000475728 CCDC172P0C7W6 258 aa15.12■□□□□ 0.01
ABCF3-211ENST00000475728 PNMA6AP0CW24 399 aaPredicted RBP15.12■□□□□ 0.01
ABCF3-211ENST00000475728 CYP11B1P15538 503 aa15.12■□□□□ 0.01
ABCF3-211ENST00000475728 GJA4P35212 333 aa15.12■□□□□ 0.01
ABCF3-211ENST00000475728 SOX5P35711 763 aa15.12■□□□□ 0.01
ABCF3-211ENST00000475728 MSANTD2Q6P1R3 559 aa15.12■□□□□ 0.01
ABCF3-211ENST00000475728 BEND5Q7L4P6 421 aa15.12■□□□□ 0.01
ABCF3-211ENST00000475728 BHLHA9Q7RTU4 235 aa15.12■□□□□ 0.01
ABCF3-211ENST00000475728 CACNA2D4Q7Z3S7 1137 aa15.12■□□□□ 0.01
ABCF3-211ENST00000475728 ADGRG2Q8IZP9 1017 aa15.12■□□□□ 0.01
ABCF3-211ENST00000475728 SYNPOQ8N3V7 929 aa15.12■□□□□ 0.01
ABCF3-211ENST00000475728 TMEM35BQ8NCS4 154 aa15.12■□□□□ 0.01
ABCF3-211ENST00000475728 IPO4Q8TEX9 1081 aaKnown RBP15.12■□□□□ 0.01
ABCF3-211ENST00000475728 FAM149B1Q96BN6 582 aa15.12■□□□□ 0.01
ABCF3-211ENST00000475728 PLD4Q96BZ4 506 aa15.12■□□□□ 0.01
ABCF3-211ENST00000475728 PPP1R13BQ96KQ4 1090 aa15.12■□□□□ 0.01
ABCF3-211ENST00000475728 SYNCQ9H7C4 482 aa15.12■□□□□ 0.01
ABCF3-211ENST00000475728 NLRC4Q9NPP4 1024 aa15.12■□□□□ 0.01
ABCF3-211ENST00000475728 DLGAP2Q9P1A6 1054 aa15.12■□□□□ 0.01
ABCF3-211ENST00000475728 NUDT5Q9UKK9 219 aa15.12■□□□□ 0.01
ABCF3-211ENST00000475728 MTF2Q9Y483 593 aaPredicted RBP15.12■□□□□ 0.01
ABCF3-211ENST00000475728 A0A1W2PQC6 194 aa15.11■□□□□ 0.01
ABCF3-211ENST00000475728 SLC12A8A0AV02 714 aa15.11■□□□□ 0.01
ABCF3-211ENST00000475728 SHISA7A6NL88 538 aa15.11■□□□□ 0.01
ABCF3-211ENST00000475728 E5RJQ4 531 aa15.11■□□□□ 0.01
ABCF3-211ENST00000475728 MDM4O15151 490 aa15.11■□□□□ 0.01
ABCF3-211ENST00000475728 CYP17A1P05093 508 aa15.11■□□□□ 0.01
ABCF3-211ENST00000475728 DRD1P21728 446 aa15.11■□□□□ 0.01
ABCF3-211ENST00000475728 KLK7P49862 253 aa15.11■□□□□ 0.01
ABCF3-211ENST00000475728 JAM2P57087 298 aa15.11■□□□□ 0.01
ABCF3-211ENST00000475728 GAD2Q05329 585 aa15.11■□□□□ 0.01
ABCF3-211ENST00000475728 PON2Q15165 354 aa15.11■□□□□ 0.01
ABCF3-211ENST00000475728 DHCR24Q15392 516 aa15.11■□□□□ 0.01
ABCF3-211ENST00000475728 NFKBIBQ15653 356 aa15.11■□□□□ 0.01
ABCF3-211ENST00000475728 PREPLQ4J6C6 727 aaPredicted RBP15.11■□□□□ 0.01
ABCF3-211ENST00000475728 LUZP1Q86V48 1076 aa15.11■□□□□ 0.01
ABCF3-211ENST00000475728 SCUBE3Q8IX30 993 aa15.11■□□□□ 0.01
ABCF3-211ENST00000475728 NDRG1Q92597 394 aaKnown RBP15.11■□□□□ 0.01
ABCF3-211ENST00000475728 EDEM1Q92611 657 aa15.11■□□□□ 0.01
ABCF3-211ENST00000475728 P2RY13Q9BPV8 354 aa15.11■□□□□ 0.01
ABCF3-211ENST00000475728 CHRDQ9H2X0 955 aa15.11■□□□□ 0.01
ABCF3-211ENST00000475728 LMAN1LQ9HAT1 526 aa15.11■□□□□ 0.01
ABCF3-211ENST00000475728 FAM86C1Q9NVL1 165 aa15.11■□□□□ 0.01
ABCF3-211ENST00000475728 MYO6Q9UM54 1294 aa15.11■□□□□ 0.01
ABCF3-211ENST00000475728 KIF26AQ9ULI4 1882 aaPredicted RBP15.11■□□□□ 0.01
ABCF3-211ENST00000475728 COL4A2P08572 1712 aa15.11■□□□□ 0.01
ABCF3-211ENST00000475728 MYO16Q9Y6X6 1858 aa15.1■□□□□ 0.01
ABCF3-211ENST00000475728 HELZP42694 1942 aaKnown RBP15.1■□□□□ 0.01
ABCF3-211ENST00000475728 TICRRQ7Z2Z1 1910 aa15.1■□□□□ 0.01
ABCF3-211ENST00000475728 A0A1B0GTH6 734 aa15.1■□□□□ 0.01
ABCF3-211ENST00000475728 OTOL1A6NHN0 477 aaPredicted RBP15.1■□□□□ 0.01
ABCF3-211ENST00000475728 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.1■□□□□ 0.01
ABCF3-211ENST00000475728 PIK3R2O00459 728 aa15.1■□□□□ 0.01
ABCF3-211ENST00000475728 GABBR2O75899 941 aa15.1■□□□□ 0.01
ABCF3-211ENST00000475728 STC2O76061 302 aa15.1■□□□□ 0.01
ABCF3-211ENST00000475728 GFPT2O94808 682 aa15.1■□□□□ 0.01
ABCF3-211ENST00000475728 GLI1P08151 1106 aa15.1■□□□□ 0.01
ABCF3-211ENST00000475728 CHRNB1P11230 501 aa15.1■□□□□ 0.01
ABCF3-211ENST00000475728 ADH5P11766 374 aa15.1■□□□□ 0.01
ABCF3-211ENST00000475728 CDH5P33151 784 aaPredicted RBP15.1■□□□□ 0.01
ABCF3-211ENST00000475728 CHKAP35790 457 aa15.1■□□□□ 0.01
ABCF3-211ENST00000475728 EIF2DP41214 584 aaKnown RBP15.1■□□□□ 0.01
ABCF3-211ENST00000475728 HARS2P49590 506 aaKnown RBP15.1■□□□□ 0.01
ABCF3-211ENST00000475728 FBXO43Q4G163 708 aa15.1■□□□□ 0.01
ABCF3-211ENST00000475728 TMEM196Q5HYL7 178 aa15.1■□□□□ 0.01
ABCF3-211ENST00000475728 EFHC1Q5JVL4 640 aa15.1■□□□□ 0.01
ABCF3-211ENST00000475728 TXNDC11Q6PKC3 985 aa15.1■□□□□ 0.01
ABCF3-211ENST00000475728 TOGARAM2Q6ZUX3 1019 aa15.1■□□□□ 0.01
ABCF3-211ENST00000475728 ZDHHC17Q8IUH5 632 aa15.1■□□□□ 0.01
ABCF3-211ENST00000475728 PASD1Q8IV76 773 aa15.1■□□□□ 0.01
ABCF3-211ENST00000475728 C1orf210Q8IVY1 113 aa15.1■□□□□ 0.01
ABCF3-211ENST00000475728 BBS7Q8IWZ6 715 aa15.1■□□□□ 0.01
ABCF3-211ENST00000475728 ZNF687Q8N1G0 1237 aa15.1■□□□□ 0.01
ABCF3-211ENST00000475728 C1orf131Q8NDD1 294 aaKnown RBP15.1■□□□□ 0.01
ABCF3-211ENST00000475728 EPS8L1Q8TE68 723 aa15.1■□□□□ 0.01
ABCF3-211ENST00000475728 CD101Q93033 1021 aa15.1■□□□□ 0.01
ABCF3-211ENST00000475728 SPATA6Q9NWH7 488 aaPredicted RBP15.1■□□□□ 0.01
ABCF3-211ENST00000475728 ASNSD1Q9NWL6 643 aa15.1■□□□□ 0.01
ABCF3-211ENST00000475728 WDR35Q9P2L0 1181 aa15.1■□□□□ 0.01
ABCF3-211ENST00000475728 CYTH4Q9UIA0 394 aa15.1■□□□□ 0.01
ABCF3-211ENST00000475728 CAPN9O14815 690 aa15.09■□□□□ 0.01
ABCF3-211ENST00000475728 SCAMP3O14828 347 aaKnown RBP15.09■□□□□ 0.01
ABCF3-211ENST00000475728 EPHB6O15197 1021 aa15.09■□□□□ 0.01
ABCF3-211ENST00000475728 HOXC11O43248 304 aaPredicted RBP15.09■□□□□ 0.01
ABCF3-211ENST00000475728 PAPSS1O43252 624 aaPredicted RBP15.09■□□□□ 0.01
ABCF3-211ENST00000475728 LAMTOR5O43504 91 aa15.09■□□□□ 0.01
ABCF3-211ENST00000475728 GREM1O60565 184 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms