RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 IST1P53990 364 aa6.23□□□□□ -1.41
ECHDC1-215ENST00000475319 ATP6V0D1P61421 351 aa6.23□□□□□ -1.41
ECHDC1-215ENST00000475319 KDSRQ06136 332 aa6.23□□□□□ -1.41
ECHDC1-215ENST00000475319 SCRN3Q0VDG4 424 aa6.23□□□□□ -1.41
ECHDC1-215ENST00000475319 FAPQ12884 760 aa6.23□□□□□ -1.41
ECHDC1-215ENST00000475319 TMEM266Q2M3C6 531 aa6.23□□□□□ -1.41
ECHDC1-215ENST00000475319 HABP4Q5JVS0 413 aaKnown RBP6.23□□□□□ -1.41
ECHDC1-215ENST00000475319 METTL24Q5JXM2 366 aa6.23□□□□□ -1.41
ECHDC1-215ENST00000475319 SLC10A5Q5PT55 438 aa6.23□□□□□ -1.41
ECHDC1-215ENST00000475319 SLC35F1Q5T1Q4 408 aa6.23□□□□□ -1.41
ECHDC1-215ENST00000475319 KCNT2Q6UVM3 1135 aa6.23□□□□□ -1.41
ECHDC1-215ENST00000475319 CEP68Q76N32 757 aa6.23□□□□□ -1.41
ECHDC1-215ENST00000475319 MIER3Q7Z3K6 550 aa6.23□□□□□ -1.41
ECHDC1-215ENST00000475319 CPLX4Q7Z7G2 160 aa6.23□□□□□ -1.41
ECHDC1-215ENST00000475319 FAM124AQ86V42 546 aa6.23□□□□□ -1.41
ECHDC1-215ENST00000475319 DGKHQ86XP1 1220 aa6.23□□□□□ -1.41
ECHDC1-215ENST00000475319 MAP4K3Q8IVH8 894 aa6.23□□□□□ -1.41
ECHDC1-215ENST00000475319 TPH2Q8IWU9 490 aa6.23□□□□□ -1.41
ECHDC1-215ENST00000475319 FMR1NBQ8N0W7 255 aaPredicted RBP6.23□□□□□ -1.41
ECHDC1-215ENST00000475319 CPSF7Q8N684 471 aaKnown RBP6.23□□□□□ -1.41
ECHDC1-215ENST00000475319 SEPT1Q8WYJ6 367 aa6.23□□□□□ -1.41
ECHDC1-215ENST00000475319 TTC17Q96AE7 1141 aa6.23□□□□□ -1.41
ECHDC1-215ENST00000475319 CIDECQ96AQ7 238 aaPredicted RBP6.23□□□□□ -1.41
ECHDC1-215ENST00000475319 KLHL29Q96CT2 875 aa6.23□□□□□ -1.41
ECHDC1-215ENST00000475319 RBM18Q96H35 190 aaKnown RBP6.23□□□□□ -1.41
ECHDC1-215ENST00000475319 TSNARE1Q96NA8 513 aa6.23□□□□□ -1.41
ECHDC1-215ENST00000475319 VPS35Q96QK1 796 aa6.23□□□□□ -1.41
ECHDC1-215ENST00000475319 XPO6Q96QU8 1125 aaKnown RBP6.23□□□□□ -1.41
ECHDC1-215ENST00000475319 MNTQ99583 582 aa6.23□□□□□ -1.41
ECHDC1-215ENST00000475319 OLFM1Q99784 485 aa6.23□□□□□ -1.41
ECHDC1-215ENST00000475319 TMPRSS13Q9BYE2 586 aa6.23□□□□□ -1.41
ECHDC1-215ENST00000475319 FOXQ1Q9C009 403 aa6.23□□□□□ -1.41
ECHDC1-215ENST00000475319 TRIM15Q9C019 465 aa6.23□□□□□ -1.41
ECHDC1-215ENST00000475319 ACAD9Q9H845 621 aa6.23□□□□□ -1.41
ECHDC1-215ENST00000475319 DBNDD1Q9H9R9 158 aa6.23□□□□□ -1.41
ECHDC1-215ENST00000475319 TBC1D23Q9NUY8 699 aa6.23□□□□□ -1.41
ECHDC1-215ENST00000475319 ZNF69Q9UC07 566 aa6.23□□□□□ -1.41
ECHDC1-215ENST00000475319 LAMP5Q9UJQ1 280 aa6.23□□□□□ -1.41
ECHDC1-215ENST00000475319 TRPC5Q9UL62 973 aaPredicted RBP6.23□□□□□ -1.41
ECHDC1-215ENST00000475319 SLC8A2Q9UPR5 921 aa6.23□□□□□ -1.41
ECHDC1-215ENST00000475319 RWDD3Q9Y3V2 267 aa6.23□□□□□ -1.41
ECHDC1-215ENST00000475319 PCDHB12Q9Y5F1 795 aa6.23□□□□□ -1.41
ECHDC1-215ENST00000475319 TMEM131LA2VDJ0 1609 aa6.23□□□□□ -1.41
ECHDC1-215ENST00000475319 AHDC1Q5TGY3 1603 aaPredicted RBP6.23□□□□□ -1.41
ECHDC1-215ENST00000475319 SYNJ2BP-COX16A0A087WUM0 186 aa6.22□□□□□ -1.41
ECHDC1-215ENST00000475319 VSTM5A8MXK1 200 aa6.22□□□□□ -1.41
ECHDC1-215ENST00000475319 ECE2O60344 883 aa6.22□□□□□ -1.41
ECHDC1-215ENST00000475319 APBB3O95704 486 aa6.22□□□□□ -1.41
ECHDC1-215ENST00000475319 LYNP07948 512 aa6.22□□□□□ -1.41
ECHDC1-215ENST00000475319 SPATA31D3P0C874 917 aa6.22□□□□□ -1.41
ECHDC1-215ENST00000475319 RARBP10826 455 aa6.22□□□□□ -1.41
ECHDC1-215ENST00000475319 ADH5P11766 374 aa6.22□□□□□ -1.41
ECHDC1-215ENST00000475319 MUTP22033 750 aa6.22□□□□□ -1.41
ECHDC1-215ENST00000475319 CDH3P22223 829 aa6.22□□□□□ -1.41
ECHDC1-215ENST00000475319 PKLRP30613 574 aa6.22□□□□□ -1.41
ECHDC1-215ENST00000475319 HOXD13P35453 343 aa6.22□□□□□ -1.41
ECHDC1-215ENST00000475319 RXRGP48443 463 aa6.22□□□□□ -1.41
ECHDC1-215ENST00000475319 ETV1P50549 477 aa6.22□□□□□ -1.41
ECHDC1-215ENST00000475319 SEC24CP53992 1094 aa6.22□□□□□ -1.41
ECHDC1-215ENST00000475319 GNG2P59768 71 aa6.22□□□□□ -1.41
ECHDC1-215ENST00000475319 IL2P60568 153 aa6.22□□□□□ -1.41
ECHDC1-215ENST00000475319 RPL26P61254 145 aaKnown RBP6.22□□□□□ -1.41
ECHDC1-215ENST00000475319 NAA20P61599 178 aa6.22□□□□□ -1.41
ECHDC1-215ENST00000475319 NCALDP61601 193 aa6.22□□□□□ -1.41
ECHDC1-215ENST00000475319 RNF4P78317 190 aa6.22□□□□□ -1.41
ECHDC1-215ENST00000475319 FCHO2Q0JRZ9 810 aa6.22□□□□□ -1.41
ECHDC1-215ENST00000475319 TRIM14Q14142 442 aa6.22□□□□□ -1.41
ECHDC1-215ENST00000475319 LPIN1Q14693 890 aa6.22□□□□□ -1.41
ECHDC1-215ENST00000475319 TMEM95Q3KNT9 176 aa6.22□□□□□ -1.41
ECHDC1-215ENST00000475319 ALFQ53S48 1182 aa6.22□□□□□ -1.41
ECHDC1-215ENST00000475319 TTC39AQ5SRH9 613 aa6.22□□□□□ -1.41
ECHDC1-215ENST00000475319 TMEM63BQ5T3F8 832 aa6.22□□□□□ -1.41
ECHDC1-215ENST00000475319 DENND5AQ6IQ26 1287 aa6.22□□□□□ -1.41
ECHDC1-215ENST00000475319 STYK1Q6J9G0 422 aa6.22□□□□□ -1.41
ECHDC1-215ENST00000475319 DRICH1Q6PGQ1 229 aaPredicted RBP6.22□□□□□ -1.41
ECHDC1-215ENST00000475319 DHRS4L2Q6PKH6 230 aa6.22□□□□□ -1.41
ECHDC1-215ENST00000475319 SHISA2Q6UWI4 295 aa6.22□□□□□ -1.41
ECHDC1-215ENST00000475319 SPATA31D4Q6ZUB0 917 aa6.22□□□□□ -1.41
ECHDC1-215ENST00000475319 IKBIPQ70UQ0 350 aa6.22□□□□□ -1.41
ECHDC1-215ENST00000475319 RTL10Q7L3V2 364 aa6.22□□□□□ -1.41
ECHDC1-215ENST00000475319 GPR141Q7Z602 305 aa6.22□□□□□ -1.41
ECHDC1-215ENST00000475319 ADAMTSL2Q86TH1 951 aa6.22□□□□□ -1.41
ECHDC1-215ENST00000475319 ZNF677Q86XU0 584 aa6.22□□□□□ -1.41
ECHDC1-215ENST00000475319 NME9Q86XW9 330 aa6.22□□□□□ -1.41
ECHDC1-215ENST00000475319 NKAIN4Q8IVV8 208 aa6.22□□□□□ -1.41
ECHDC1-215ENST00000475319 CBARPQ8N350 705 aaPredicted RBP6.22□□□□□ -1.41
ECHDC1-215ENST00000475319 RIBC1Q8N443 379 aaPredicted RBP6.22□□□□□ -1.41
ECHDC1-215ENST00000475319 FIBCD1Q8N539 461 aa6.22□□□□□ -1.41
ECHDC1-215ENST00000475319 MREGQ8N565 214 aa6.22□□□□□ -1.41
ECHDC1-215ENST00000475319 DNAJB8Q8NHS0 232 aa6.22□□□□□ -1.41
ECHDC1-215ENST00000475319 PIGOQ8TEQ8 1089 aa6.22□□□□□ -1.41
ECHDC1-215ENST00000475319 GIPC3Q8TF64 312 aa6.22□□□□□ -1.41
ECHDC1-215ENST00000475319 CHMP6Q96FZ7 201 aa6.22□□□□□ -1.41
ECHDC1-215ENST00000475319 ART5Q96L15 291 aa6.22□□□□□ -1.41
ECHDC1-215ENST00000475319 CCDC140Q96MF4 163 aa6.22□□□□□ -1.41
ECHDC1-215ENST00000475319 CFAP57Q96MR6 1250 aa6.22□□□□□ -1.41
ECHDC1-215ENST00000475319 USP28Q96RU2 1077 aa6.22□□□□□ -1.41
ECHDC1-215ENST00000475319 SDF4Q9BRK5 362 aa6.22□□□□□ -1.41
ECHDC1-215ENST00000475319 ORAI3Q9BRQ5 295 aa6.22□□□□□ -1.41
ECHDC1-215ENST00000475319 STK33Q9BYT3 514 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms