RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 CGNQ9P2M7 1197 aaKnown RBP13.31□□□□□ -0.28
SKA3-206ENST00000475251 DKK4Q9UBT3 224 aa13.31□□□□□ -0.28
SKA3-206ENST00000475251 PCOLCE2Q9UKZ9 415 aa13.31□□□□□ -0.28
SKA3-206ENST00000475251 RAD54BQ9Y620 910 aa13.31□□□□□ -0.28
SKA3-206ENST00000475251 MORC2Q9Y6X9 1032 aaPredicted RBP13.31□□□□□ -0.28
SKA3-206ENST00000475251 UBE4BO95155 1302 aa13.31□□□□□ -0.28
SKA3-206ENST00000475251 FASNP49327 2511 aaKnown RBP13.3□□□□□ -0.28
SKA3-206ENST00000475251 FREM2Q5SZK8 3169 aa13.3□□□□□ -0.28
SKA3-206ENST00000475251 PRRT4C9JH25 899 aa13.3□□□□□ -0.28
SKA3-206ENST00000475251 TRIM24O15164 1050 aa13.3□□□□□ -0.28
SKA3-206ENST00000475251 FLRT2O43155 660 aa13.3□□□□□ -0.28
SKA3-206ENST00000475251 CBFA2T3O75081 653 aa13.3□□□□□ -0.28
SKA3-206ENST00000475251 AP1G2O75843 785 aa13.3□□□□□ -0.28
SKA3-206ENST00000475251 P4HA1P13674 534 aa13.3□□□□□ -0.28
SKA3-206ENST00000475251 MATKP42679 507 aa13.3□□□□□ -0.28
SKA3-206ENST00000475251 ZNF699Q32M78 642 aa13.3□□□□□ -0.28
SKA3-206ENST00000475251 TADA2BQ86TJ2 420 aa13.3□□□□□ -0.28
SKA3-206ENST00000475251 GALNT15Q8N3T1 639 aa13.3□□□□□ -0.28
SKA3-206ENST00000475251 ZNF507Q8TCN5 953 aa13.3□□□□□ -0.28
SKA3-206ENST00000475251 UCMAQ8WVF2 138 aa13.3□□□□□ -0.28
SKA3-206ENST00000475251 TOE1Q96GM8 510 aaKnown RBP13.3□□□□□ -0.28
SKA3-206ENST00000475251 KLF16Q9BXK1 252 aaPredicted RBP13.3□□□□□ -0.28
SKA3-206ENST00000475251 PANK2Q9BZ23 570 aa13.3□□□□□ -0.28
SKA3-206ENST00000475251 XYLT2Q9H1B5 865 aa13.3□□□□□ -0.28
SKA3-206ENST00000475251 GAREM1Q9H706 876 aa13.3□□□□□ -0.28
SKA3-206ENST00000475251 UPF2Q9HAU5 1272 aaKnown RBP13.3□□□□□ -0.28
SKA3-206ENST00000475251 CYLDQ9NQC7 956 aa13.3□□□□□ -0.28
SKA3-206ENST00000475251 TM7SF3Q9NS93 570 aa13.3□□□□□ -0.28
SKA3-206ENST00000475251 WSB2Q9NYS7 404 aaPredicted RBP13.3□□□□□ -0.28
SKA3-206ENST00000475251 USP36Q9P275 1121 aaKnown RBP13.3□□□□□ -0.28
SKA3-206ENST00000475251 PCDHGB2Q9Y5G2 931 aa13.3□□□□□ -0.28
SKA3-206ENST00000475251 DSPP15924 2871 aaKnown RBP13.3□□□□□ -0.28
SKA3-206ENST00000475251 BCAT2O15382 392 aaPredicted RBP13.29□□□□□ -0.28
SKA3-206ENST00000475251 SYNCRIPO60506 623 aaKnown RBP13.29□□□□□ -0.28
SKA3-206ENST00000475251 MAOBP27338 520 aa13.29□□□□□ -0.28
SKA3-206ENST00000475251 PLA2G4AP47712 749 aa13.29□□□□□ -0.28
SKA3-206ENST00000475251 CYP2J2P51589 502 aa13.29□□□□□ -0.28
SKA3-206ENST00000475251 BIRC3Q13489 604 aa13.29□□□□□ -0.28
SKA3-206ENST00000475251 SUZ12Q15022 739 aaKnown RBP13.29□□□□□ -0.28
SKA3-206ENST00000475251 FAM26FQ5R3K3 315 aa13.29□□□□□ -0.28
SKA3-206ENST00000475251 KLHDC10Q6PID8 442 aa13.29□□□□□ -0.28
SKA3-206ENST00000475251 PAQR9Q6ZVX9 377 aa13.29□□□□□ -0.28
SKA3-206ENST00000475251 TMPRSS7Q7RTY8 843 aa13.29□□□□□ -0.28
SKA3-206ENST00000475251 FUKQ8N0W3 1084 aa13.29□□□□□ -0.28
SKA3-206ENST00000475251 ZCCHC9Q8N567 271 aaKnown RBP13.29□□□□□ -0.28
SKA3-206ENST00000475251 PDILTQ8N807 584 aa13.29□□□□□ -0.28
SKA3-206ENST00000475251 ENGASEQ8NFI3 743 aa13.29□□□□□ -0.28
SKA3-206ENST00000475251 MDM1Q8TC05 714 aa13.29□□□□□ -0.28
SKA3-206ENST00000475251 GPR174Q9BXC1 333 aa13.29□□□□□ -0.28
SKA3-206ENST00000475251 TRIM9Q9C026 710 aa13.29□□□□□ -0.28
SKA3-206ENST00000475251 MIR1-1HGQ9H1L0 117 aa13.29□□□□□ -0.28
SKA3-206ENST00000475251 SMYD3Q9H7B4 428 aa13.29□□□□□ -0.28
SKA3-206ENST00000475251 CSNK1G1Q9HCP0 422 aa13.29□□□□□ -0.28
SKA3-206ENST00000475251 ITM2CQ9NQX7 267 aa13.29□□□□□ -0.28
SKA3-206ENST00000475251 ZNF510Q9Y2H8 683 aa13.29□□□□□ -0.28
SKA3-206ENST00000475251 SLC27A6Q9Y2P4 619 aa13.29□□□□□ -0.28
SKA3-206ENST00000475251 STON1Q9Y6Q2 735 aa13.29□□□□□ -0.28
SKA3-206ENST00000475251 NBEAQ8NFP9 2946 aa13.28□□□□□ -0.28
SKA3-206ENST00000475251 METTL12A8MUP2 240 aa13.28□□□□□ -0.28
SKA3-206ENST00000475251 TGFB1I1O43294 461 aa13.28□□□□□ -0.28
SKA3-206ENST00000475251 GREM1O60565 184 aa13.28□□□□□ -0.28
SKA3-206ENST00000475251 CD2BP2O95400 341 aaKnown RBP13.28□□□□□ -0.28
SKA3-206ENST00000475251 ACADMP11310 421 aa13.28□□□□□ -0.28
SKA3-206ENST00000475251 HOXD13P35453 343 aa13.28□□□□□ -0.28
SKA3-206ENST00000475251 CHKAP35790 457 aa13.28□□□□□ -0.28
SKA3-206ENST00000475251 PSEN1P49768 467 aa13.28□□□□□ -0.28
SKA3-206ENST00000475251 CDH8P55286 799 aa13.28□□□□□ -0.28
SKA3-206ENST00000475251 ASIC1P78348 528 aa13.28□□□□□ -0.28
SKA3-206ENST00000475251 CEBPZQ03701 1054 aaKnown RBP13.28□□□□□ -0.28
SKA3-206ENST00000475251 FUT11Q495W5 492 aa13.28□□□□□ -0.28
SKA3-206ENST00000475251 C8orf34Q49A92 452 aa13.28□□□□□ -0.28
SKA3-206ENST00000475251 DCAF12L1Q5VU92 463 aa13.28□□□□□ -0.28
SKA3-206ENST00000475251 EPM2AIP1Q7L775 607 aaPredicted RBP13.28□□□□□ -0.28
SKA3-206ENST00000475251 SLCO6A1Q86UG4 719 aa13.28□□□□□ -0.28
SKA3-206ENST00000475251 C12orf56Q8IXR9 622 aa13.28□□□□□ -0.28
SKA3-206ENST00000475251 GLIS3Q8NEA6 775 aa13.28□□□□□ -0.28
SKA3-206ENST00000475251 HNRNPLLQ8WVV9 542 aaKnown RBP13.28□□□□□ -0.28
SKA3-206ENST00000475251 PRCCQ92733 491 aaPredicted RBP13.28□□□□□ -0.28
SKA3-206ENST00000475251 HPS3Q969F9 1004 aa13.28□□□□□ -0.28
SKA3-206ENST00000475251 WBP2Q969T9 261 aa13.28□□□□□ -0.28
SKA3-206ENST00000475251 ERLEC1Q96DZ1 483 aa13.28□□□□□ -0.28
SKA3-206ENST00000475251 SIPA1Q96FS4 1042 aa13.28□□□□□ -0.28
SKA3-206ENST00000475251 CDK5RAP1Q96SZ6 601 aaKnown RBP13.28□□□□□ -0.28
SKA3-206ENST00000475251 NUP58Q9BVL2 599 aa13.28□□□□□ -0.28
SKA3-206ENST00000475251 DNAI2Q9GZS0 605 aa13.28□□□□□ -0.28
SKA3-206ENST00000475251 PCED1AQ9H1Q7 454 aa13.28□□□□□ -0.28
SKA3-206ENST00000475251 SLC6A17Q9H1V8 727 aa13.28□□□□□ -0.28
SKA3-206ENST00000475251 KBTBD4Q9NVX7 518 aa13.28□□□□□ -0.28
SKA3-206ENST00000475251 DNMT3LQ9UJW3 386 aa13.28□□□□□ -0.28
SKA3-206ENST00000475251 SCML2Q9UQR0 700 aa13.28□□□□□ -0.28
SKA3-206ENST00000475251 RAXQ9Y2V3 346 aa13.28□□□□□ -0.28
SKA3-206ENST00000475251 PCDHA5Q9Y5H7 936 aa13.28□□□□□ -0.28
SKA3-206ENST00000475251 A0A087X0B3 334 aa13.27□□□□□ -0.29
SKA3-206ENST00000475251 CLIC2O15247 247 aa13.27□□□□□ -0.29
SKA3-206ENST00000475251 EXOC3O60645 756 aa13.27□□□□□ -0.29
SKA3-206ENST00000475251 CILPO75339 1184 aa13.27□□□□□ -0.29
SKA3-206ENST00000475251 CISD3P0C7P0 127 aa13.27□□□□□ -0.29
SKA3-206ENST00000475251 FAM200BP0CF97 657 aa13.27□□□□□ -0.29
SKA3-206ENST00000475251 TPMTP51580 245 aa13.27□□□□□ -0.29
SKA3-206ENST00000475251 MAP3K7CLP57077 242 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms