RNA–Protein interactions for RNA: ENST00000474956.1

RNF220-211, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 3,303 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-211ENST00000474956 C9orf57Q5W0N0 161 aa12.94□□□□□ -0.34
RNF220-211ENST00000474956 TRIM68Q6AZZ1 485 aa12.94□□□□□ -0.34
RNF220-211ENST00000474956 SLC27A1Q6PCB7 646 aa12.94□□□□□ -0.34
RNF220-211ENST00000474956 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.94□□□□□ -0.34
RNF220-211ENST00000474956 ZNF398Q8TD17 642 aa12.94□□□□□ -0.34
RNF220-211ENST00000474956 CYP3A43Q9HB55 503 aa12.94□□□□□ -0.34
RNF220-211ENST00000474956 COX16Q9P0S2 106 aa12.94□□□□□ -0.34
RNF220-211ENST00000474956 SLC24A2Q9UI40 661 aa12.94□□□□□ -0.34
RNF220-211ENST00000474956 C2CD2LO14523 706 aa12.93□□□□□ -0.34
RNF220-211ENST00000474956 BEST1O76090 585 aa12.93□□□□□ -0.34
RNF220-211ENST00000474956 LMNAP02545 664 aaKnown RBP12.93□□□□□ -0.34
RNF220-211ENST00000474956 DARSP14868 501 aaKnown RBP12.93□□□□□ -0.34
RNF220-211ENST00000474956 PTPN4P29074 926 aa12.93□□□□□ -0.34
RNF220-211ENST00000474956 EPHB2P29323 1055 aa12.93□□□□□ -0.34
RNF220-211ENST00000474956 ZBTB6Q15916 424 aa12.93□□□□□ -0.34
RNF220-211ENST00000474956 TAZQ16635 292 aa12.93□□□□□ -0.34
RNF220-211ENST00000474956 DRICH1Q6PGQ1 229 aaPredicted RBP12.93□□□□□ -0.34
RNF220-211ENST00000474956 ZNF483Q8TF39 744 aaPredicted RBP12.93□□□□□ -0.34
RNF220-211ENST00000474956 PCDH9Q9HC56 1237 aa12.93□□□□□ -0.34
RNF220-211ENST00000474956 SAR1AQ9NR31 198 aa12.93□□□□□ -0.34
RNF220-211ENST00000474956 SPATS2LQ9NUQ6 558 aaKnown RBP12.93□□□□□ -0.34
RNF220-211ENST00000474956 ZMYND8Q9ULU4 1186 aaPredicted RBP12.93□□□□□ -0.34
RNF220-211ENST00000474956 CHMP2BQ9UQN3 213 aa12.93□□□□□ -0.34
RNF220-211ENST00000474956 DRG1Q9Y295 367 aaKnown RBP12.93□□□□□ -0.34
RNF220-211ENST00000474956 SMIM28A0A1B0GU29 152 aa12.93□□□□□ -0.34
RNF220-211ENST00000474956 TYROBPO43914 113 aa12.93□□□□□ -0.34
RNF220-211ENST00000474956 F2P00734 622 aa12.93□□□□□ -0.34
RNF220-211ENST00000474956 PTPN7P35236 360 aa12.93□□□□□ -0.34
RNF220-211ENST00000474956 PCK1P35558 622 aa12.93□□□□□ -0.34
RNF220-211ENST00000474956 HDAC4P56524 1084 aa12.93□□□□□ -0.34
RNF220-211ENST00000474956 MRPS35P82673 323 aaKnown RBP12.93□□□□□ -0.34
RNF220-211ENST00000474956 MFSD10Q14728 455 aa12.93□□□□□ -0.34
RNF220-211ENST00000474956 SLC1A5Q15758 541 aa12.93□□□□□ -0.34
RNF220-211ENST00000474956 FAM110CQ1W6H9 321 aa12.93□□□□□ -0.34
RNF220-211ENST00000474956 FYB2Q5VWT5 728 aa12.93□□□□□ -0.34
RNF220-211ENST00000474956 PQLC3Q8N755 202 aa12.93□□□□□ -0.34
RNF220-211ENST00000474956 NAT8LQ8N9F0 302 aa12.93□□□□□ -0.34
RNF220-211ENST00000474956 FNIP1Q8TF40 1166 aa12.93□□□□□ -0.34
RNF220-211ENST00000474956 WNT8BQ93098 351 aa12.93□□□□□ -0.34
RNF220-211ENST00000474956 SNRNP25Q9BV90 132 aaKnown RBP12.93□□□□□ -0.34
RNF220-211ENST00000474956 TLE6Q9H808 572 aa12.93□□□□□ -0.34
RNF220-211ENST00000474956 LNPEPQ9UIQ6 1025 aa12.93□□□□□ -0.34
RNF220-211ENST00000474956 ZFP69BQ9UJL9 534 aa12.93□□□□□ -0.34
RNF220-211ENST00000474956 COL1A2P08123 1366 aa12.93□□□□□ -0.34
RNF220-211ENST00000474956 IQCA1LA6NCM1 817 aa12.93□□□□□ -0.34
RNF220-211ENST00000474956 NDC80O14777 642 aa12.93□□□□□ -0.34
RNF220-211ENST00000474956 CBX6O95503 412 aa12.93□□□□□ -0.34
RNF220-211ENST00000474956 ZNF865P0CJ78 1059 aaPredicted RBP12.93□□□□□ -0.34
RNF220-211ENST00000474956 HOXD8P13378 290 aaPredicted RBP12.93□□□□□ -0.34
RNF220-211ENST00000474956 CTGFP29279 349 aa12.93□□□□□ -0.34
RNF220-211ENST00000474956 PEX19P40855 299 aa12.93□□□□□ -0.34
RNF220-211ENST00000474956 RNASELQ05823 741 aaKnown RBP12.93□□□□□ -0.34
RNF220-211ENST00000474956 MORF4L2Q15014 288 aa12.93□□□□□ -0.34
RNF220-211ENST00000474956 SNX17Q15036 470 aa12.93□□□□□ -0.34
RNF220-211ENST00000474956 HIF1AQ16665 826 aa12.93□□□□□ -0.34
RNF220-211ENST00000474956 TSNAXIP1Q2TAA8 658 aa12.93□□□□□ -0.34
RNF220-211ENST00000474956 DARS2Q6PI48 645 aaKnown RBP12.93□□□□□ -0.34
RNF220-211ENST00000474956 NLRP9Q7RTR0 991 aa12.93□□□□□ -0.34
RNF220-211ENST00000474956 OTOAQ7RTW8 1153 aa12.93□□□□□ -0.34
RNF220-211ENST00000474956 FBXO36Q8NEA4 188 aa12.93□□□□□ -0.34
RNF220-211ENST00000474956 PCDH19Q8TAB3 1148 aa12.93□□□□□ -0.34
RNF220-211ENST00000474956 SLC2A14Q8TDB8 520 aa12.93□□□□□ -0.34
RNF220-211ENST00000474956 SLC35F5Q8WV83 523 aa12.93□□□□□ -0.34
RNF220-211ENST00000474956 GCOM2Q9BZD3 368 aaPredicted RBP12.93□□□□□ -0.34
RNF220-211ENST00000474956 DCLRE1BQ9H816 532 aa12.93□□□□□ -0.34
RNF220-211ENST00000474956 SSU72Q9NP77 194 aaKnown RBP12.93□□□□□ -0.34
RNF220-211ENST00000474956 CYLDQ9NQC7 956 aa12.93□□□□□ -0.34
RNF220-211ENST00000474956 PIH1D1Q9NWS0 290 aaKnown RBP12.93□□□□□ -0.34
RNF220-211ENST00000474956 PSMC3IPQ9P2W1 217 aaPredicted RBP12.93□□□□□ -0.34
RNF220-211ENST00000474956 XPO7Q9UIA9 1087 aaKnown RBP12.93□□□□□ -0.34
RNF220-211ENST00000474956 MRPL42Q9Y6G3 142 aaKnown RBP12.93□□□□□ -0.34
RNF220-211ENST00000474956 A6NJR5 290 aa12.92□□□□□ -0.34
RNF220-211ENST00000474956 ALOX15BO15296 676 aa12.92□□□□□ -0.34
RNF220-211ENST00000474956 ZWINTO95229 277 aa12.92□□□□□ -0.34
RNF220-211ENST00000474956 P4HA1P13674 534 aa12.92□□□□□ -0.34
RNF220-211ENST00000474956 TAF1BQ53T94 588 aaPredicted RBP12.92□□□□□ -0.34
RNF220-211ENST00000474956 UBXN11Q5T124 520 aa12.92□□□□□ -0.34
RNF220-211ENST00000474956 ANO7Q6IWH7 933 aa12.92□□□□□ -0.34
RNF220-211ENST00000474956 PPP1R2P3Q6NXS1 205 aa12.92□□□□□ -0.34
RNF220-211ENST00000474956 CCDC185Q8N715 623 aa12.92□□□□□ -0.34
RNF220-211ENST00000474956 PLD5Q8N7P1 536 aa12.92□□□□□ -0.34
RNF220-211ENST00000474956 CFAP61Q8NHU2 1237 aa12.92□□□□□ -0.34
RNF220-211ENST00000474956 ZNF75CPQ92670 426 aaPredicted RBP12.92□□□□□ -0.34
RNF220-211ENST00000474956 PGLYRP2Q96PD5 576 aa12.92□□□□□ -0.34
RNF220-211ENST00000474956 CNPY3Q9BT09 278 aa12.92□□□□□ -0.34
RNF220-211ENST00000474956 MAK16Q9BXY0 300 aaKnown RBP12.92□□□□□ -0.34
RNF220-211ENST00000474956 ETNK2Q9NVF9 386 aa12.92□□□□□ -0.34
RNF220-211ENST00000474956 TIMM13Q9Y5L4 95 aaPredicted RBP12.92□□□□□ -0.34
RNF220-211ENST00000474956 SCN4AP35499 1836 aa12.92□□□□□ -0.34
RNF220-211ENST00000474956 H7C0C1 242 aa12.92□□□□□ -0.34
RNF220-211ENST00000474956 PRPSAP2O60256 369 aa12.92□□□□□ -0.34
RNF220-211ENST00000474956 FAM155BO75949 473 aa12.92□□□□□ -0.34
RNF220-211ENST00000474956 MYCNP04198 464 aaPredicted RBP12.92□□□□□ -0.34
RNF220-211ENST00000474956 LINGO3P0C6S8 592 aa12.92□□□□□ -0.34
RNF220-211ENST00000474956 RBL1P28749 1068 aa12.92□□□□□ -0.34
RNF220-211ENST00000474956 ATP5OP48047 213 aa12.92□□□□□ -0.34
RNF220-211ENST00000474956 PTDSS1P48651 473 aaKnown RBP12.92□□□□□ -0.34
RNF220-211ENST00000474956 NDUFV1P49821 464 aa12.92□□□□□ -0.34
RNF220-211ENST00000474956 GBE1Q04446 702 aa12.92□□□□□ -0.34
RNF220-211ENST00000474956 SLC10A2Q12908 348 aaPredicted RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms