RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 GDF9O60383 454 aa7.34□□□□□ -1.23
LIMD1-204ENST00000474665 MFAP3LO75121 409 aa7.34□□□□□ -1.23
LIMD1-204ENST00000474665 RTN3O95197 1032 aaPredicted RBP7.34□□□□□ -1.23
LIMD1-204ENST00000474665 PRAMEF12O95522 483 aa7.34□□□□□ -1.23
LIMD1-204ENST00000474665 OLFM2O95897 454 aa7.34□□□□□ -1.23
LIMD1-204ENST00000474665 TBX18O95935 607 aa7.34□□□□□ -1.23
LIMD1-204ENST00000474665 ZBED1O96006 694 aa7.34□□□□□ -1.23
LIMD1-204ENST00000474665 OAS1P00973 400 aaKnown RBP7.34□□□□□ -1.23
LIMD1-204ENST00000474665 TPM3P06753 285 aa7.34□□□□□ -1.23
LIMD1-204ENST00000474665 LCP1P13796 627 aa7.34□□□□□ -1.23
LIMD1-204ENST00000474665 GLULP15104 373 aa7.34□□□□□ -1.23
LIMD1-204ENST00000474665 PDE6CP51160 858 aa7.34□□□□□ -1.23
LIMD1-204ENST00000474665 DAOAP59103 153 aa7.34□□□□□ -1.23
LIMD1-204ENST00000474665 IFRD2Q12894 506 aaPredicted RBP7.34□□□□□ -1.23
LIMD1-204ENST00000474665 TDGQ13569 410 aa7.34□□□□□ -1.23
LIMD1-204ENST00000474665 ASIC2Q16515 512 aa7.34□□□□□ -1.23
LIMD1-204ENST00000474665 CLEC16AQ2KHT3 1053 aa7.34□□□□□ -1.23
LIMD1-204ENST00000474665 CYP4A22Q5TCH4 519 aa7.34□□□□□ -1.23
LIMD1-204ENST00000474665 TRNP1Q6NT89 227 aa7.34□□□□□ -1.23
LIMD1-204ENST00000474665 PRR23BQ6ZRT6 265 aa7.34□□□□□ -1.23
LIMD1-204ENST00000474665 PDZD4Q76G19 769 aaPredicted RBP7.34□□□□□ -1.23
LIMD1-204ENST00000474665 GET4Q7L5D6 327 aaPredicted RBP7.34□□□□□ -1.23
LIMD1-204ENST00000474665 MON1AQ86VX9 555 aa7.34□□□□□ -1.23
LIMD1-204ENST00000474665 ZNF677Q86XU0 584 aa7.34□□□□□ -1.23
LIMD1-204ENST00000474665 SCML4Q8N228 414 aa7.34□□□□□ -1.23
LIMD1-204ENST00000474665 ELMOD1Q8N336 334 aa7.34□□□□□ -1.23
LIMD1-204ENST00000474665 OR8K1Q8NGG5 319 aa7.34□□□□□ -1.23
LIMD1-204ENST00000474665 ATRIPQ8WXE1 791 aa7.34□□□□□ -1.23
LIMD1-204ENST00000474665 FGF14Q92915 247 aa7.34□□□□□ -1.23
LIMD1-204ENST00000474665 WBP2Q969T9 261 aa7.34□□□□□ -1.23
LIMD1-204ENST00000474665 MCRS1Q96EZ8 462 aa7.34□□□□□ -1.23
LIMD1-204ENST00000474665 PPP1R13BQ96KQ4 1090 aa7.34□□□□□ -1.23
LIMD1-204ENST00000474665 ZFRQ96KR1 1074 aaKnown RBP7.34□□□□□ -1.23
LIMD1-204ENST00000474665 ASB16Q96NS5 453 aa7.34□□□□□ -1.23
LIMD1-204ENST00000474665 CHP1Q99653 195 aa7.34□□□□□ -1.23
LIMD1-204ENST00000474665 ADAM33Q9BZ11 813 aa7.34□□□□□ -1.23
LIMD1-204ENST00000474665 PLA2G2FQ9BZM2 168 aa7.34□□□□□ -1.23
LIMD1-204ENST00000474665 SMG9Q9H0W8 520 aaKnown RBP7.34□□□□□ -1.23
LIMD1-204ENST00000474665 ATXN3LQ9H3M9 355 aa7.34□□□□□ -1.23
LIMD1-204ENST00000474665 CCSER2Q9H7U1 834 aa7.34□□□□□ -1.23
LIMD1-204ENST00000474665 TBC1D17Q9HA65 648 aa7.34□□□□□ -1.23
LIMD1-204ENST00000474665 GRPEL1Q9HAV7 217 aa7.34□□□□□ -1.23
LIMD1-204ENST00000474665 COMMD8Q9NX08 183 aa7.34□□□□□ -1.23
LIMD1-204ENST00000474665 GDE1Q9NZC3 331 aa7.34□□□□□ -1.23
LIMD1-204ENST00000474665 EPS15L1Q9UBC2 864 aa7.34□□□□□ -1.23
LIMD1-204ENST00000474665 CDH7Q9ULB5 785 aa7.34□□□□□ -1.23
LIMD1-204ENST00000474665 DUSP12Q9UNI6 340 aa7.34□□□□□ -1.23
LIMD1-204ENST00000474665 CCL26Q9Y258 94 aa7.34□□□□□ -1.23
LIMD1-204ENST00000474665 USTQ9Y2C2 406 aa7.34□□□□□ -1.23
LIMD1-204ENST00000474665 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.34□□□□□ -1.23
LIMD1-204ENST00000474665 CACNA1IQ9P0X4 2223 aa7.33□□□□□ -1.24
LIMD1-204ENST00000474665 A0A087X0T9 212 aa7.33□□□□□ -1.24
LIMD1-204ENST00000474665 ZNF197O14709 1029 aa7.33□□□□□ -1.24
LIMD1-204ENST00000474665 MDM4O15151 490 aa7.33□□□□□ -1.24
LIMD1-204ENST00000474665 COCHO43405 550 aa7.33□□□□□ -1.24
LIMD1-204ENST00000474665 GREM1O60565 184 aa7.33□□□□□ -1.24
LIMD1-204ENST00000474665 LSM8O95777 96 aaKnown RBP7.33□□□□□ -1.24
LIMD1-204ENST00000474665 SERPING1P05155 500 aa7.33□□□□□ -1.24
LIMD1-204ENST00000474665 FAM228BP0C875 321 aa7.33□□□□□ -1.24
LIMD1-204ENST00000474665 FECHP22830 423 aa7.33□□□□□ -1.24
LIMD1-204ENST00000474665 MMP8P22894 467 aa7.33□□□□□ -1.24
LIMD1-204ENST00000474665 CDC25BP30305 580 aa7.33□□□□□ -1.24
LIMD1-204ENST00000474665 CDC25CP30307 473 aa7.33□□□□□ -1.24
LIMD1-204ENST00000474665 EIF4A3P38919 411 aaKnown RBP7.33□□□□□ -1.24
LIMD1-204ENST00000474665 VIPR2P41587 438 aa7.33□□□□□ -1.24
LIMD1-204ENST00000474665 GABRB2P47870 512 aa7.33□□□□□ -1.24
LIMD1-204ENST00000474665 PITX1P78337 314 aaPredicted RBP7.33□□□□□ -1.24
LIMD1-204ENST00000474665 CENPCQ03188 943 aa7.33□□□□□ -1.24
LIMD1-204ENST00000474665 CSTF1Q05048 431 aaKnown RBP7.33□□□□□ -1.24
LIMD1-204ENST00000474665 KLHL30Q0D2K2 578 aa7.33□□□□□ -1.24
LIMD1-204ENST00000474665 HTR4Q13639 388 aa7.33□□□□□ -1.24
LIMD1-204ENST00000474665 TAF12Q16514 161 aa7.33□□□□□ -1.24
LIMD1-204ENST00000474665 GPR158Q5T848 1215 aa7.33□□□□□ -1.24
LIMD1-204ENST00000474665 TANGO2Q6ICL3 276 aa7.33□□□□□ -1.24
LIMD1-204ENST00000474665 PARM1Q6UWI2 310 aa7.33□□□□□ -1.24
LIMD1-204ENST00000474665 OLFML1Q6UWY5 402 aa7.33□□□□□ -1.24
LIMD1-204ENST00000474665 MMS22LQ6ZRQ5 1243 aa7.33□□□□□ -1.24
LIMD1-204ENST00000474665 FAM183BPQ6ZVS7 135 aa7.33□□□□□ -1.24
LIMD1-204ENST00000474665 MON1BQ7L1V2 547 aa7.33□□□□□ -1.24
LIMD1-204ENST00000474665 OTOP3Q7RTS5 596 aa7.33□□□□□ -1.24
LIMD1-204ENST00000474665 XYLT1Q86Y38 959 aa7.33□□□□□ -1.24
LIMD1-204ENST00000474665 ARID3BQ8IVW6 561 aaPredicted RBP7.33□□□□□ -1.24
LIMD1-204ENST00000474665 CMTM8Q8IZV2 173 aa7.33□□□□□ -1.24
LIMD1-204ENST00000474665 PLCD3Q8N3E9 789 aa7.33□□□□□ -1.24
LIMD1-204ENST00000474665 ARL14EPQ8N8R7 260 aaPredicted RBP7.33□□□□□ -1.24
LIMD1-204ENST00000474665 MAB21L3Q8N8X9 362 aa7.33□□□□□ -1.24
LIMD1-204ENST00000474665 TMEM35BQ8NCS4 154 aa7.33□□□□□ -1.24
LIMD1-204ENST00000474665 ZSCAN18Q8TBC5 510 aaPredicted RBP7.33□□□□□ -1.24
LIMD1-204ENST00000474665 RSAD2Q8WXG1 361 aa7.33□□□□□ -1.24
LIMD1-204ENST00000474665 OVCA2Q8WZ82 227 aa7.33□□□□□ -1.24
LIMD1-204ENST00000474665 USP13Q92995 863 aaPredicted RBP7.33□□□□□ -1.24
LIMD1-204ENST00000474665 IQCDQ96DY2 449 aa7.33□□□□□ -1.24
LIMD1-204ENST00000474665 DNAI2Q9GZS0 605 aa7.33□□□□□ -1.24
LIMD1-204ENST00000474665 MIS12Q9H081 205 aa7.33□□□□□ -1.24
LIMD1-204ENST00000474665 FBXO44Q9H4M3 255 aa7.33□□□□□ -1.24
LIMD1-204ENST00000474665 TASP1Q9H6P5 420 aa7.33□□□□□ -1.24
LIMD1-204ENST00000474665 KCNK12Q9HB15 430 aa7.33□□□□□ -1.24
LIMD1-204ENST00000474665 TRPV4Q9HBA0 871 aa7.33□□□□□ -1.24
LIMD1-204ENST00000474665 LRRC4Q9HBW1 653 aa7.33□□□□□ -1.24
LIMD1-204ENST00000474665 CYLDQ9NQC7 956 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms