RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 B4GALNT4Q76KP1 1039 aa22.62■■□□□ 1.21
CCM2-206ENST00000474617 UNC45BQ8IWX7 931 aa22.62■■□□□ 1.21
CCM2-206ENST00000474617 FAM71DQ8N9W8 422 aa22.62■■□□□ 1.21
CCM2-206ENST00000474617 PCED1BQ96HM7 432 aa22.62■■□□□ 1.21
CCM2-206ENST00000474617 SUSD3Q96L08 255 aa22.62■■□□□ 1.21
CCM2-206ENST00000474617 LPIN3Q9BQK8 851 aa22.62■■□□□ 1.21
CCM2-206ENST00000474617 KLC2Q9H0B6 622 aa22.62■■□□□ 1.21
CCM2-206ENST00000474617 DHX35Q9H5Z1 703 aaKnown RBP22.62■■□□□ 1.21
CCM2-206ENST00000474617 SAE1Q9UBE0 346 aaPredicted RBP22.62■■□□□ 1.21
CCM2-206ENST00000474617 GGA2Q9UJY4 613 aa22.62■■□□□ 1.21
CCM2-206ENST00000474617 FZD10Q9ULW2 581 aa22.62■■□□□ 1.21
CCM2-206ENST00000474617 MGEA5O60502 916 aa22.61■■□□□ 1.21
CCM2-206ENST00000474617 AOC2O75106 756 aa22.61■■□□□ 1.21
CCM2-206ENST00000474617 ATP2C2O75185 946 aa22.61■■□□□ 1.21
CCM2-206ENST00000474617 FAM107AO95990 144 aa22.61■■□□□ 1.21
CCM2-206ENST00000474617 MYCNP04198 464 aaPredicted RBP22.61■■□□□ 1.21
CCM2-206ENST00000474617 ACAT1P24752 427 aaKnown RBP22.61■■□□□ 1.21
CCM2-206ENST00000474617 DAOAP59103 153 aa22.61■■□□□ 1.21
CCM2-206ENST00000474617 SCAPQ12770 1279 aa22.61■■□□□ 1.21
CCM2-206ENST00000474617 TIGD5Q53EQ6 642 aa22.61■■□□□ 1.21
CCM2-206ENST00000474617 ZC3H12AQ5D1E8 599 aaKnown RBP22.61■■□□□ 1.21
CCM2-206ENST00000474617 INTS6LQ5JSJ4 861 aaKnown RBP22.61■■□□□ 1.21
CCM2-206ENST00000474617 PDZD4Q76G19 769 aaPredicted RBP22.61■■□□□ 1.21
CCM2-206ENST00000474617 URGCPQ8TCY9 931 aa22.61■■□□□ 1.21
CCM2-206ENST00000474617 CLEC4CQ8WTT0 213 aa22.61■■□□□ 1.21
CCM2-206ENST00000474617 CCDC134Q9H6E4 229 aa22.61■■□□□ 1.21
CCM2-206ENST00000474617 HMX1Q9NP08 348 aaPredicted RBP22.61■■□□□ 1.21
CCM2-206ENST00000474617 TRMT13Q9NUP7 481 aaKnown RBP22.61■■□□□ 1.21
CCM2-206ENST00000474617 CASTOR2A6NHX0 329 aa22.6■■□□□ 1.21
CCM2-206ENST00000474617 NDUFAB1O14561 156 aa22.6■■□□□ 1.21
CCM2-206ENST00000474617 TRAPPC3O43617 180 aa22.6■■□□□ 1.21
CCM2-206ENST00000474617 CKBP12277 381 aa22.6■■□□□ 1.21
CCM2-206ENST00000474617 ETS1P14921 441 aa22.6■■□□□ 1.21
CCM2-206ENST00000474617 GDF10P55107 478 aa22.6■■□□□ 1.21
CCM2-206ENST00000474617 MAP3K7CLP57077 242 aa22.6■■□□□ 1.21
CCM2-206ENST00000474617 FAM189BP81408 668 aa22.6■■□□□ 1.21
CCM2-206ENST00000474617 TSPY1Q01534 308 aa22.6■■□□□ 1.21
CCM2-206ENST00000474617 DCAF6Q58WW2 860 aa22.6■■□□□ 1.21
CCM2-206ENST00000474617 SLC45A4Q5BKX6 768 aa22.6■■□□□ 1.21
CCM2-206ENST00000474617 PPP6R3Q5H9R7 873 aaPredicted RBP22.6■■□□□ 1.21
CCM2-206ENST00000474617 EFHC2Q5JST6 749 aa22.6■■□□□ 1.21
CCM2-206ENST00000474617 CSPG4P5Q96PW8 444 aa22.6■■□□□ 1.21
CCM2-206ENST00000474617 USP29Q9HBJ7 922 aa22.6■■□□□ 1.21
CCM2-206ENST00000474617 GMNCA6NCL1 334 aa22.59■■□□□ 1.21
CCM2-206ENST00000474617 CAPN9O14815 690 aa22.59■■□□□ 1.21
CCM2-206ENST00000474617 HCAR3P49019 387 aa22.59■■□□□ 1.21
CCM2-206ENST00000474617 HNRNPH2P55795 449 aaKnown RBP22.59■■□□□ 1.21
CCM2-206ENST00000474617 KCTD19Q17RG1 926 aaPredicted RBP22.59■■□□□ 1.21
CCM2-206ENST00000474617 KLHL38Q2WGJ6 581 aa22.59■■□□□ 1.21
CCM2-206ENST00000474617 ARL13BQ3SXY8 428 aa22.59■■□□□ 1.21
CCM2-206ENST00000474617 C4orf50Q6ZRC1 276 aa22.59■■□□□ 1.21
CCM2-206ENST00000474617 TADA2BQ86TJ2 420 aa22.59■■□□□ 1.21
CCM2-206ENST00000474617 C3orf58Q8NDZ4 430 aa22.59■■□□□ 1.21
CCM2-206ENST00000474617 CD99L2Q8TCZ2 262 aa22.59■■□□□ 1.21
CCM2-206ENST00000474617 PYROXD1Q8WU10 500 aa22.59■■□□□ 1.21
CCM2-206ENST00000474617 LRRC39Q96DD0 335 aa22.59■■□□□ 1.21
CCM2-206ENST00000474617 DMAP1Q9NPF5 467 aaPredicted RBP22.59■■□□□ 1.21
CCM2-206ENST00000474617 MTMR10Q9NXD2 777 aa22.59■■□□□ 1.21
CCM2-206ENST00000474617 PCDHB8Q9UN66 801 aa22.59■■□□□ 1.21
CCM2-206ENST00000474617 TDRD15B5MCY1 1934 aaKnown RBP22.58■■□□□ 1.21
CCM2-206ENST00000474617 EXOC1LA0A1B0GW35 172 aa22.58■■□□□ 1.21
CCM2-206ENST00000474617 CLDN5O00501 218 aa22.58■■□□□ 1.21
CCM2-206ENST00000474617 EBAG9O00559 213 aa22.58■■□□□ 1.21
CCM2-206ENST00000474617 GCATO75600 419 aa22.58■■□□□ 1.21
CCM2-206ENST00000474617 STK10O94804 968 aaKnown RBP22.58■■□□□ 1.21
CCM2-206ENST00000474617 DEUP1Q05D60 604 aa22.58■■□□□ 1.21
CCM2-206ENST00000474617 PDIA2Q13087 525 aaKnown RBP22.58■■□□□ 1.21
CCM2-206ENST00000474617 LONRF1Q17RB8 773 aa22.58■■□□□ 1.21
CCM2-206ENST00000474617 KIAA0319Q5VV43 1072 aa22.58■■□□□ 1.21
CCM2-206ENST00000474617 MICALCLQ6ZW33 695 aa22.58■■□□□ 1.21
CCM2-206ENST00000474617 ZBED8Q8IZ13 594 aa22.58■■□□□ 1.21
CCM2-206ENST00000474617 ARHGEF2Q92974 986 aaKnown RBP22.58■■□□□ 1.21
CCM2-206ENST00000474617 QKIQ96PU8 341 aaKnown RBP eCLIP22.58■■□□□ 1.21
CCM2-206ENST00000474617 SMOQ99835 787 aa22.58■■□□□ 1.21
CCM2-206ENST00000474617 BRD8Q9H0E9 1235 aa22.58■■□□□ 1.21
CCM2-206ENST00000474617 XPO7Q9UIA9 1087 aaKnown RBP22.58■■□□□ 1.21
CCM2-206ENST00000474617 ZMYND8Q9ULU4 1186 aaPredicted RBP22.58■■□□□ 1.21
CCM2-206ENST00000474617 ATXN2Q99700 1313 aaKnown RBP22.57■■□□□ 1.2
CCM2-206ENST00000474617 MYBPHLA2RUH7 354 aa22.57■■□□□ 1.2
CCM2-206ENST00000474617 C5orf60A6NFR6 353 aa22.57■■□□□ 1.2
CCM2-206ENST00000474617 GSTA2P09210 222 aa22.57■■□□□ 1.2
CCM2-206ENST00000474617 SLC18A1P54219 525 aa22.57■■□□□ 1.2
CCM2-206ENST00000474617 KCNJ11Q14654 390 aa22.57■■□□□ 1.2
CCM2-206ENST00000474617 CA9Q16790 459 aa22.57■■□□□ 1.2
CCM2-206ENST00000474617 PM20D1Q6GTS8 502 aa22.57■■□□□ 1.2
CCM2-206ENST00000474617 OVOS1Q6IE37 1185 aa22.57■■□□□ 1.2
CCM2-206ENST00000474617 C1orf228Q6PIY5 440 aa22.57■■□□□ 1.2
CCM2-206ENST00000474617 ZC3H18Q86VM9 953 aaKnown RBP22.57■■□□□ 1.2
CCM2-206ENST00000474617 RNF169Q8NCN4 708 aa22.57■■□□□ 1.2
CCM2-206ENST00000474617 MCUQ8NE86 351 aa22.57■■□□□ 1.2
CCM2-206ENST00000474617 C9orf72Q96LT7 481 aa22.57■■□□□ 1.2
CCM2-206ENST00000474617 KCTD15Q96SI1 283 aaPredicted RBP22.57■■□□□ 1.2
CCM2-206ENST00000474617 ULBP1Q9BZM6 244 aa22.57■■□□□ 1.2
CCM2-206ENST00000474617 ELAC1Q9H777 363 aaKnown RBP22.57■■□□□ 1.2
CCM2-206ENST00000474617 STARD7Q9NQZ5 370 aa22.57■■□□□ 1.2
CCM2-206ENST00000474617 PHF24Q9UPV7 400 aa22.57■■□□□ 1.2
CCM2-206ENST00000474617 HEY1Q9Y5J3 304 aa22.57■■□□□ 1.2
CCM2-206ENST00000474617 USP3Q9Y6I4 520 aa22.57■■□□□ 1.2
CCM2-206ENST00000474617 TSC2P49815 1807 aa22.57■■□□□ 1.2
CCM2-206ENST00000474617 SMIM23A6NLE4 172 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms