RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 L1TD1Q5T7N2 865 aaKnown RBP3.85□□□□□ -1.79
ECHDC1-213ENST00000474240 RRAGBQ5VZM2 374 aa3.85□□□□□ -1.79
ECHDC1-213ENST00000474240 ABLIM2Q6H8Q1 611 aa3.85□□□□□ -1.79
ECHDC1-213ENST00000474240 KIRREL2Q6UWL6 708 aa3.85□□□□□ -1.79
ECHDC1-213ENST00000474240 VSTM1Q6UX27 236 aa3.85□□□□□ -1.79
ECHDC1-213ENST00000474240 KIAA0408Q6ZU52 694 aa3.85□□□□□ -1.79
ECHDC1-213ENST00000474240 GATAD2AQ86YP4 633 aa3.85□□□□□ -1.79
ECHDC1-213ENST00000474240 GALNT4Q8N4A0 578 aa3.85□□□□□ -1.79
ECHDC1-213ENST00000474240 TERB1Q8NA31 727 aa3.85□□□□□ -1.79
ECHDC1-213ENST00000474240 SUN3Q8TAQ9 357 aa3.85□□□□□ -1.79
ECHDC1-213ENST00000474240 GDF15Q99988 308 aa3.85□□□□□ -1.79
ECHDC1-213ENST00000474240 RNF26Q9BY78 433 aaPredicted RBP3.85□□□□□ -1.79
ECHDC1-213ENST00000474240 KRTAP2-2Q9BYT5 123 aa3.85□□□□□ -1.79
ECHDC1-213ENST00000474240 SLC29A3Q9BZD2 475 aa3.85□□□□□ -1.79
ECHDC1-213ENST00000474240 CIPCQ9C0C6 399 aa3.85□□□□□ -1.79
ECHDC1-213ENST00000474240 PLCB1Q9NQ66 1216 aa3.85□□□□□ -1.79
ECHDC1-213ENST00000474240 MGAT4CQ9UBM8 478 aa3.85□□□□□ -1.79
ECHDC1-213ENST00000474240 ABHD14A-ACY1A0A1B0GW23 586 aa3.84□□□□□ -1.79
ECHDC1-213ENST00000474240 AP4M1O00189 453 aa3.84□□□□□ -1.79
ECHDC1-213ENST00000474240 ZNF213O14771 459 aa3.84□□□□□ -1.79
ECHDC1-213ENST00000474240 ZSCAN9O15535 394 aaPredicted RBP3.84□□□□□ -1.79
ECHDC1-213ENST00000474240 FFAR2O15552 330 aa3.84□□□□□ -1.79
ECHDC1-213ENST00000474240 SPRY2O43597 315 aa3.84□□□□□ -1.79
ECHDC1-213ENST00000474240 SKAP2O75563 359 aaPredicted RBP3.84□□□□□ -1.79
ECHDC1-213ENST00000474240 PRKCGP05129 697 aa3.84□□□□□ -1.79
ECHDC1-213ENST00000474240 ABCG1P45844 678 aa3.84□□□□□ -1.79
ECHDC1-213ENST00000474240 CFHR3Q02985 330 aa3.84□□□□□ -1.79
ECHDC1-213ENST00000474240 ICA1Q05084 483 aa3.84□□□□□ -1.79
ECHDC1-213ENST00000474240 CSHL1Q14406 222 aa3.84□□□□□ -1.79
ECHDC1-213ENST00000474240 CLEC9AQ6UXN8 241 aa3.84□□□□□ -1.79
ECHDC1-213ENST00000474240 RASGRP3Q8IV61 690 aa3.84□□□□□ -1.79
ECHDC1-213ENST00000474240 SRRM1Q8IYB3 904 aaKnown RBP3.84□□□□□ -1.79
ECHDC1-213ENST00000474240 CLASRPQ8N2M8 674 aaKnown RBP3.84□□□□□ -1.79
ECHDC1-213ENST00000474240 ENAHQ8N8S7 591 aaPredicted RBP3.84□□□□□ -1.79
ECHDC1-213ENST00000474240 SEMA6DQ8NFY4 1073 aa3.84□□□□□ -1.79
ECHDC1-213ENST00000474240 ADAMTS18Q8TE60 1221 aa3.84□□□□□ -1.79
ECHDC1-213ENST00000474240 WASF1Q92558 559 aa3.84□□□□□ -1.79
ECHDC1-213ENST00000474240 RSC1A1Q92681 617 aa3.84□□□□□ -1.79
ECHDC1-213ENST00000474240 KIAA1191Q96A73 305 aa3.84□□□□□ -1.79
ECHDC1-213ENST00000474240 CTHRC1Q96CG8 243 aa3.84□□□□□ -1.79
ECHDC1-213ENST00000474240 LTV1Q96GA3 475 aaPredicted RBP3.84□□□□□ -1.79
ECHDC1-213ENST00000474240 ZBTB45Q96K62 511 aaPredicted RBP3.84□□□□□ -1.79
ECHDC1-213ENST00000474240 LENG8Q96PV6 779 aaPredicted RBP3.84□□□□□ -1.79
ECHDC1-213ENST00000474240 MPHOSPH6Q99547 160 aaKnown RBP3.84□□□□□ -1.79
ECHDC1-213ENST00000474240 EIF3CQ99613 913 aaKnown RBP3.84□□□□□ -1.79
ECHDC1-213ENST00000474240 TTLL2Q9BWV7 592 aa3.84□□□□□ -1.79
ECHDC1-213ENST00000474240 SLC39A10Q9ULF5 831 aa3.84□□□□□ -1.79
ECHDC1-213ENST00000474240 ZMYND8Q9ULU4 1186 aaPredicted RBP3.84□□□□□ -1.79
ECHDC1-213ENST00000474240 MAGED2Q9UNF1 606 aaPredicted RBP3.84□□□□□ -1.79
ECHDC1-213ENST00000474240 COL3A1P02461 1466 aaPredicted RBP3.84□□□□□ -1.8
ECHDC1-213ENST00000474240 H3BNC9 293 aa3.83□□□□□ -1.8
ECHDC1-213ENST00000474240 USP12O75317 370 aa3.83□□□□□ -1.8
ECHDC1-213ENST00000474240 RNF8O76064 485 aa3.83□□□□□ -1.8
ECHDC1-213ENST00000474240 VNN1O95497 513 aa3.83□□□□□ -1.8
ECHDC1-213ENST00000474240 NDST3O95803 873 aa3.83□□□□□ -1.8
ECHDC1-213ENST00000474240 MT-CO3P00414 261 aa3.83□□□□□ -1.8
ECHDC1-213ENST00000474240 ARP10275 920 aa3.83□□□□□ -1.8
ECHDC1-213ENST00000474240 HOXB6P17509 224 aaKnown RBP3.83□□□□□ -1.8
ECHDC1-213ENST00000474240 ABCB4P21439 1286 aa3.83□□□□□ -1.8
ECHDC1-213ENST00000474240 CERS1P27544 350 aa3.83□□□□□ -1.8
ECHDC1-213ENST00000474240 HTR7P34969 479 aa3.83□□□□□ -1.8
ECHDC1-213ENST00000474240 GSTM5P46439 218 aa3.83□□□□□ -1.8
ECHDC1-213ENST00000474240 ALDH18A1P54886 795 aaKnown RBP3.83□□□□□ -1.8
ECHDC1-213ENST00000474240 RHBDL3P58872 404 aa3.83□□□□□ -1.8
ECHDC1-213ENST00000474240 CYP4F2P78329 520 aa3.83□□□□□ -1.8
ECHDC1-213ENST00000474240 CCDC15Q0P6D6 951 aa3.83□□□□□ -1.8
ECHDC1-213ENST00000474240 LMAN2Q12907 356 aa3.83□□□□□ -1.8
ECHDC1-213ENST00000474240 BIRC2Q13490 618 aa3.83□□□□□ -1.8
ECHDC1-213ENST00000474240 CBFBQ13951 182 aa3.83□□□□□ -1.8
ECHDC1-213ENST00000474240 KCNJ12Q14500 433 aa3.83□□□□□ -1.8
ECHDC1-213ENST00000474240 RAB30Q15771 203 aa3.83□□□□□ -1.8
ECHDC1-213ENST00000474240 XRRA1Q6P2D8 792 aa3.83□□□□□ -1.8
ECHDC1-213ENST00000474240 SERPINA13PQ6UXR4 307 aa3.83□□□□□ -1.8
ECHDC1-213ENST00000474240 AMIGO2Q86SJ2 522 aa3.83□□□□□ -1.8
ECHDC1-213ENST00000474240 P3H2Q8IVL5 708 aa3.83□□□□□ -1.8
ECHDC1-213ENST00000474240 NRSN1Q8IZ57 195 aa3.83□□□□□ -1.8
ECHDC1-213ENST00000474240 LINC01465Q8N7H1 131 aa3.83□□□□□ -1.8
ECHDC1-213ENST00000474240 C12orf76Q8N812 135 aaPredicted RBP3.83□□□□□ -1.8
ECHDC1-213ENST00000474240 FAM71DQ8N9W8 422 aa3.83□□□□□ -1.8
ECHDC1-213ENST00000474240 GLIS1Q8NBF1 620 aa3.83□□□□□ -1.8
ECHDC1-213ENST00000474240 WDR60Q8WVS4 1066 aa3.83□□□□□ -1.8
ECHDC1-213ENST00000474240 MUL1Q969V5 352 aa3.83□□□□□ -1.8
ECHDC1-213ENST00000474240 REPS1Q96D71 796 aa3.83□□□□□ -1.8
ECHDC1-213ENST00000474240 WDYHV1Q96HA8 205 aa3.83□□□□□ -1.8
ECHDC1-213ENST00000474240 HIC2Q96JB3 615 aa3.83□□□□□ -1.8
ECHDC1-213ENST00000474240 CCDC17Q96LX7 622 aa3.83□□□□□ -1.8
ECHDC1-213ENST00000474240 HS6ST2Q96MM7 605 aa3.83□□□□□ -1.8
ECHDC1-213ENST00000474240 MMS19Q96T76 1030 aa3.83□□□□□ -1.8
ECHDC1-213ENST00000474240 CHST12Q9NRB3 414 aa3.83□□□□□ -1.8
ECHDC1-213ENST00000474240 IL17RBQ9NRM6 502 aa3.83□□□□□ -1.8
ECHDC1-213ENST00000474240 SH3BP4Q9P0V3 963 aa3.83□□□□□ -1.8
ECHDC1-213ENST00000474240 UBE2J1Q9Y385 318 aaPredicted RBP3.83□□□□□ -1.8
ECHDC1-213ENST00000474240 DTNAQ9Y4J8 743 aa3.83□□□□□ -1.8
ECHDC1-213ENST00000474240 PCDHGB2Q9Y5G2 931 aa3.83□□□□□ -1.8
ECHDC1-213ENST00000474240 SPATA31A1Q5TZJ5 1347 aa3.83□□□□□ -1.8
ECHDC1-213ENST00000474240 COL11A2P13942 1736 aaPredicted RBP3.83□□□□□ -1.8
ECHDC1-213ENST00000474240 TTC34A8MYJ7 566 aa3.82□□□□□ -1.8
ECHDC1-213ENST00000474240 AGPSO00116 658 aa3.82□□□□□ -1.8
ECHDC1-213ENST00000474240 EXOC3O60645 756 aa3.82□□□□□ -1.8
ECHDC1-213ENST00000474240 RBMXL2O75526 392 aaKnown RBP3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms