RNA–Protein interactions for RNA: ENST00000474190.1

CASC3-204, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-204ENST00000474190 MAB21L3Q8N8X9 362 aa10.85□□□□□ -0.67
CASC3-204ENST00000474190 PDZD8Q8NEN9 1154 aa10.85□□□□□ -0.67
CASC3-204ENST00000474190 DQX1Q8TE96 717 aaKnown RBP10.85□□□□□ -0.67
CASC3-204ENST00000474190 CCDC42Q96M95 316 aa10.85□□□□□ -0.67
CASC3-204ENST00000474190 RIPOR3Q96MK2 946 aa10.85□□□□□ -0.67
CASC3-204ENST00000474190 ZNF830Q96NB3 372 aaPredicted RBP10.85□□□□□ -0.67
CASC3-204ENST00000474190 ASB16Q96NS5 453 aa10.85□□□□□ -0.67
CASC3-204ENST00000474190 NECTIN4Q96NY8 510 aa10.85□□□□□ -0.67
CASC3-204ENST00000474190 SLITRK1Q96PX8 696 aa10.85□□□□□ -0.67
CASC3-204ENST00000474190 NPY6RQ99463 290 aa10.85□□□□□ -0.67
CASC3-204ENST00000474190 DESI2Q9BSY9 194 aa10.85□□□□□ -0.67
CASC3-204ENST00000474190 DDX23Q9BUQ8 820 aaKnown RBP10.85□□□□□ -0.67
CASC3-204ENST00000474190 KLF16Q9BXK1 252 aaPredicted RBP10.85□□□□□ -0.67
CASC3-204ENST00000474190 PLA2G2FQ9BZM2 168 aa10.85□□□□□ -0.67
CASC3-204ENST00000474190 PDCL3Q9H2J4 239 aa10.85□□□□□ -0.67
CASC3-204ENST00000474190 TASP1Q9H6P5 420 aa10.85□□□□□ -0.67
CASC3-204ENST00000474190 PIDD1Q9HB75 910 aa10.85□□□□□ -0.67
CASC3-204ENST00000474190 ZNHIT6Q9NWK9 470 aaKnown RBP10.85□□□□□ -0.67
CASC3-204ENST00000474190 TRPM5Q9NZQ8 1165 aa10.85□□□□□ -0.67
CASC3-204ENST00000474190 CEP83Q9Y592 693 aa10.85□□□□□ -0.67
CASC3-204ENST00000474190 C2orf16Q68DN1 1984 aa10.85□□□□□ -0.67
CASC3-204ENST00000474190 ANKRD62A6NC57 917 aa10.84□□□□□ -0.67
CASC3-204ENST00000474190 C19orf67A6NJJ6 358 aa10.84□□□□□ -0.67
CASC3-204ENST00000474190 SOBPA7XYQ1 873 aa10.84□□□□□ -0.67
CASC3-204ENST00000474190 GOLGA8SH3BPF8 625 aa10.84□□□□□ -0.67
CASC3-204ENST00000474190 GFRA2O00451 464 aa10.84□□□□□ -0.67
CASC3-204ENST00000474190 ZNF197O14709 1029 aa10.84□□□□□ -0.67
CASC3-204ENST00000474190 ENDOD1O94919 500 aa10.84□□□□□ -0.67
CASC3-204ENST00000474190 FGF19O95750 216 aa10.84□□□□□ -0.67
CASC3-204ENST00000474190 IGLV3-27P01718 113 aa10.84□□□□□ -0.67
CASC3-204ENST00000474190 KLKB1P03952 638 aa10.84□□□□□ -0.67
CASC3-204ENST00000474190 CALB1P05937 261 aa10.84□□□□□ -0.67
CASC3-204ENST00000474190 VIPR2P41587 438 aa10.84□□□□□ -0.67
CASC3-204ENST00000474190 ARHGAP25P42331 645 aa10.84□□□□□ -0.67
CASC3-204ENST00000474190 ATXN1P54253 815 aaKnown RBP10.84□□□□□ -0.67
CASC3-204ENST00000474190 TMEM31Q5JXX7 168 aa10.84□□□□□ -0.67
CASC3-204ENST00000474190 FAM102AQ5T9C2 384 aaPredicted RBP10.84□□□□□ -0.67
CASC3-204ENST00000474190 TANGO2Q6ICL3 276 aa10.84□□□□□ -0.67
CASC3-204ENST00000474190 CES5AQ6NT32 575 aa10.84□□□□□ -0.67
CASC3-204ENST00000474190 PARM1Q6UWI2 310 aa10.84□□□□□ -0.67
CASC3-204ENST00000474190 GET4Q7L5D6 327 aaPredicted RBP10.84□□□□□ -0.67
CASC3-204ENST00000474190 TAC4Q86UU9 113 aa10.84□□□□□ -0.67
CASC3-204ENST00000474190 IPO4Q8TEX9 1081 aaKnown RBP10.84□□□□□ -0.67
CASC3-204ENST00000474190 CENPIQ92674 756 aaPredicted RBP10.84□□□□□ -0.67
CASC3-204ENST00000474190 FGF14Q92915 247 aa10.84□□□□□ -0.67
CASC3-204ENST00000474190 ASIC4Q96FT7 647 aa10.84□□□□□ -0.67
CASC3-204ENST00000474190 SLC39A13Q96H72 371 aa10.84□□□□□ -0.67
CASC3-204ENST00000474190 NOX5Q96PH1 765 aa10.84□□□□□ -0.67
CASC3-204ENST00000474190 PHF7Q9BWX1 381 aaPredicted RBP10.84□□□□□ -0.67
CASC3-204ENST00000474190 SMOC2Q9H3U7 446 aa10.84□□□□□ -0.67
CASC3-204ENST00000474190 POPDC2Q9HBU9 364 aa10.84□□□□□ -0.67
CASC3-204ENST00000474190 CD320Q9NPF0 282 aa10.84□□□□□ -0.67
CASC3-204ENST00000474190 TLR8Q9NR97 1041 aaKnown RBP10.84□□□□□ -0.67
CASC3-204ENST00000474190 METTL5Q9NRN9 209 aaKnown RBP10.84□□□□□ -0.67
CASC3-204ENST00000474190 GKN1Q9NS71 199 aa10.84□□□□□ -0.67
CASC3-204ENST00000474190 GDE1Q9NZC3 331 aa10.84□□□□□ -0.67
CASC3-204ENST00000474190 ARHGAP26Q9UNA1 814 aa10.84□□□□□ -0.67
CASC3-204ENST00000474190 USTQ9Y2C2 406 aa10.84□□□□□ -0.67
CASC3-204ENST00000474190 PCDHA13Q9Y5I0 950 aa10.84□□□□□ -0.67
CASC3-204ENST00000474190 ADGRG1Q9Y653 693 aa10.84□□□□□ -0.67
CASC3-204ENST00000474190 DUSP10Q9Y6W6 482 aa10.84□□□□□ -0.67
CASC3-204ENST00000474190 DOCK8Q8NF50 2099 aa10.83□□□□□ -0.68
CASC3-204ENST00000474190 DENND4AQ7Z401 1863 aa10.83□□□□□ -0.68
CASC3-204ENST00000474190 DPYSL4O14531 572 aa10.83□□□□□ -0.68
CASC3-204ENST00000474190 PJA2O43164 708 aa10.83□□□□□ -0.68
CASC3-204ENST00000474190 MSI1O43347 362 aaKnown RBP10.83□□□□□ -0.68
CASC3-204ENST00000474190 AKR1B10O60218 316 aa10.83□□□□□ -0.68
CASC3-204ENST00000474190 HSF2BPO75031 334 aa10.83□□□□□ -0.68
CASC3-204ENST00000474190 MTA2O94776 668 aa10.83□□□□□ -0.68
CASC3-204ENST00000474190 TMEM253P0C7T8 217 aa10.83□□□□□ -0.68
CASC3-204ENST00000474190 TCF3P15923 654 aa10.83□□□□□ -0.68
CASC3-204ENST00000474190 PFKLP17858 780 aa10.83□□□□□ -0.68
CASC3-204ENST00000474190 ABCB4P21439 1286 aa10.83□□□□□ -0.68
CASC3-204ENST00000474190 DDX6P26196 483 aaKnown RBP eCLIP10.83□□□□□ -0.68
CASC3-204ENST00000474190 MATKP42679 507 aa10.83□□□□□ -0.68
CASC3-204ENST00000474190 PSEN1P49768 467 aa10.83□□□□□ -0.68
CASC3-204ENST00000474190 ZP2Q05996 745 aa10.83□□□□□ -0.68
CASC3-204ENST00000474190 USP4Q13107 963 aa10.83□□□□□ -0.68
CASC3-204ENST00000474190 HTR4Q13639 388 aa10.83□□□□□ -0.68
CASC3-204ENST00000474190 ZNF77Q15935 545 aa10.83□□□□□ -0.68
CASC3-204ENST00000474190 EFHC1Q5JVL4 640 aa10.83□□□□□ -0.68
CASC3-204ENST00000474190 HECTD3Q5T447 861 aa10.83□□□□□ -0.68
CASC3-204ENST00000474190 Q6ZNB5 142 aa10.83□□□□□ -0.68
CASC3-204ENST00000474190 ARID3BQ8IVW6 561 aaPredicted RBP10.83□□□□□ -0.68
CASC3-204ENST00000474190 ZSCAN18Q8TBC5 510 aaPredicted RBP10.83□□□□□ -0.68
CASC3-204ENST00000474190 ADAM32Q8TC27 787 aa10.83□□□□□ -0.68
CASC3-204ENST00000474190 RXFP2Q8WXD0 754 aa10.83□□□□□ -0.68
CASC3-204ENST00000474190 MRPS31Q92665 395 aaKnown RBP10.83□□□□□ -0.68
CASC3-204ENST00000474190 ZNF653Q96CK0 615 aa10.83□□□□□ -0.68
CASC3-204ENST00000474190 MYEOVQ96EZ4 313 aa10.83□□□□□ -0.68
CASC3-204ENST00000474190 PGAP3Q96FM1 320 aaPredicted RBP10.83□□□□□ -0.68
CASC3-204ENST00000474190 FCRL2Q96LA5 508 aaPredicted RBP10.83□□□□□ -0.68
CASC3-204ENST00000474190 CFAP57Q96MR6 1250 aa10.83□□□□□ -0.68
CASC3-204ENST00000474190 TBCBQ99426 244 aa10.83□□□□□ -0.68
CASC3-204ENST00000474190 OSGEPQ9NPF4 335 aa10.83□□□□□ -0.68
CASC3-204ENST00000474190 ABCC13Q9NSE7 274 aa10.83□□□□□ -0.68
CASC3-204ENST00000474190 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.83□□□□□ -0.68
CASC3-204ENST00000474190 EHD2Q9NZN4 543 aa10.83□□□□□ -0.68
CASC3-204ENST00000474190 WDR35Q9P2L0 1181 aa10.83□□□□□ -0.68
CASC3-204ENST00000474190 TRIM10Q9UDY6 481 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms