RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 TCAF1Q9Y4C2 921 aa4.78□□□□□ -1.64
BRCA1-212ENST00000473961 SNX14Q9Y5W7 946 aa4.78□□□□□ -1.64
BRCA1-212ENST00000473961 KRTAP23-1A1A580 65 aa4.77□□□□□ -1.65
BRCA1-212ENST00000473961 FAM90A18PA6NE21 464 aa4.77□□□□□ -1.65
BRCA1-212ENST00000473961 FAM90A16PA6NEW6 464 aa4.77□□□□□ -1.65
BRCA1-212ENST00000473961 FAM90A9PA6NNJ1 464 aa4.77□□□□□ -1.65
BRCA1-212ENST00000473961 A8MVJ9 347 aa4.77□□□□□ -1.65
BRCA1-212ENST00000473961 FAM90A5PA8MXJ8 464 aa4.77□□□□□ -1.65
BRCA1-212ENST00000473961 B4E171 279 aa4.77□□□□□ -1.65
BRCA1-212ENST00000473961 F5H0A9 414 aaPredicted RBP4.77□□□□□ -1.65
BRCA1-212ENST00000473961 EXOC5O00471 708 aa4.77□□□□□ -1.65
BRCA1-212ENST00000473961 SLC16A3O15427 465 aaKnown RBP4.77□□□□□ -1.65
BRCA1-212ENST00000473961 HNRNPRO43390 633 aaKnown RBP4.77□□□□□ -1.65
BRCA1-212ENST00000473961 ZNF623O75123 536 aa4.77□□□□□ -1.65
BRCA1-212ENST00000473961 GUCY1B2O75343 617 aa4.77□□□□□ -1.65
BRCA1-212ENST00000473961 TAF5LO75529 589 aa4.77□□□□□ -1.65
BRCA1-212ENST00000473961 RPP40O75818 363 aaKnown RBP4.77□□□□□ -1.65
BRCA1-212ENST00000473961 NXPH3O95157 252 aa4.77□□□□□ -1.65
BRCA1-212ENST00000473961 ONECUT2O95948 504 aa4.77□□□□□ -1.65
BRCA1-212ENST00000473961 CNPP09543 421 aaKnown RBP4.77□□□□□ -1.65
BRCA1-212ENST00000473961 FAM90A15PP0C7V4 464 aa4.77□□□□□ -1.65
BRCA1-212ENST00000473961 FAM90A14PP0C7W9 464 aa4.77□□□□□ -1.65
BRCA1-212ENST00000473961 TNNT1P13805 278 aa4.77□□□□□ -1.65
BRCA1-212ENST00000473961 YY1P25490 414 aa4.77□□□□□ -1.65
BRCA1-212ENST00000473961 NTSR1P30989 418 aa4.77□□□□□ -1.65
BRCA1-212ENST00000473961 TSPAN7P41732 249 aa4.77□□□□□ -1.65
BRCA1-212ENST00000473961 LIFRP42702 1097 aa4.77□□□□□ -1.65
BRCA1-212ENST00000473961 NXPH1P58417 271 aa4.77□□□□□ -1.65
BRCA1-212ENST00000473961 SUMO2P61956 95 aaKnown RBP4.77□□□□□ -1.65
BRCA1-212ENST00000473961 FOXD4Q12950 439 aaPredicted RBP4.77□□□□□ -1.65
BRCA1-212ENST00000473961 ACOX1Q15067 660 aa4.77□□□□□ -1.65
BRCA1-212ENST00000473961 RABL3Q5HYI8 236 aa4.77□□□□□ -1.65
BRCA1-212ENST00000473961 ATG16L1Q676U5 607 aa4.77□□□□□ -1.65
BRCA1-212ENST00000473961 DTX2Q86UW9 622 aa4.77□□□□□ -1.65
BRCA1-212ENST00000473961 HEATR4Q86WZ0 1026 aa4.77□□□□□ -1.65
BRCA1-212ENST00000473961 LRRC71Q8N4P6 559 aa4.77□□□□□ -1.65
BRCA1-212ENST00000473961 ANKRD44Q8N8A2 993 aa4.77□□□□□ -1.65
BRCA1-212ENST00000473961 Q8NA96 180 aa4.77□□□□□ -1.65
BRCA1-212ENST00000473961 CSGALNACT1Q8TDX6 532 aa4.77□□□□□ -1.65
BRCA1-212ENST00000473961 HVCN1Q96D96 273 aa4.77□□□□□ -1.65
BRCA1-212ENST00000473961 ZBTB45Q96K62 511 aaPredicted RBP4.77□□□□□ -1.65
BRCA1-212ENST00000473961 TIGD1Q96MW7 591 aa4.77□□□□□ -1.65
BRCA1-212ENST00000473961 PAAF1Q9BRP4 392 aa4.77□□□□□ -1.65
BRCA1-212ENST00000473961 ALG8Q9BVK2 526 aa4.77□□□□□ -1.65
BRCA1-212ENST00000473961 DPCDQ9BVM2 203 aaPredicted RBP4.77□□□□□ -1.65
BRCA1-212ENST00000473961 PCED1AQ9H1Q7 454 aa4.77□□□□□ -1.65
BRCA1-212ENST00000473961 PREBQ9HCU5 417 aa4.77□□□□□ -1.65
BRCA1-212ENST00000473961 OLA1Q9NTK5 396 aaKnown RBP4.77□□□□□ -1.65
BRCA1-212ENST00000473961 TMEM160Q9NX00 188 aa4.77□□□□□ -1.65
BRCA1-212ENST00000473961 RIMKLBQ9ULI2 386 aa4.77□□□□□ -1.65
BRCA1-212ENST00000473961 SH2B3Q9UQQ2 575 aa4.77□□□□□ -1.65
BRCA1-212ENST00000473961 SSX2IPQ9Y2D8 614 aa4.77□□□□□ -1.65
BRCA1-212ENST00000473961 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.77□□□□□ -1.65
BRCA1-212ENST00000473961 DUSP10Q9Y6W6 482 aa4.77□□□□□ -1.65
BRCA1-212ENST00000473961 NISCHQ9Y2I1 1504 aa4.77□□□□□ -1.65
BRCA1-212ENST00000473961 GPR42O15529 346 aa4.76□□□□□ -1.65
BRCA1-212ENST00000473961 RNASEH2AO75792 299 aaKnown RBP4.76□□□□□ -1.65
BRCA1-212ENST00000473961 CD4P01730 458 aa4.76□□□□□ -1.65
BRCA1-212ENST00000473961 DLDP09622 509 aaKnown RBP4.76□□□□□ -1.65
BRCA1-212ENST00000473961 DRD1P21728 446 aa4.76□□□□□ -1.65
BRCA1-212ENST00000473961 DDX6P26196 483 aaKnown RBP eCLIP4.76□□□□□ -1.65
BRCA1-212ENST00000473961 PSMC2P35998 433 aaKnown RBP4.76□□□□□ -1.65
BRCA1-212ENST00000473961 BMPR1AP36894 532 aa4.76□□□□□ -1.65
BRCA1-212ENST00000473961 PCP4P48539 62 aa4.76□□□□□ -1.65
BRCA1-212ENST00000473961 SCNN1GP51170 649 aa4.76□□□□□ -1.65
BRCA1-212ENST00000473961 ATXN1P54253 815 aaKnown RBP4.76□□□□□ -1.65
BRCA1-212ENST00000473961 SEMA3BQ13214 749 aa4.76□□□□□ -1.65
BRCA1-212ENST00000473961 PRKG2Q13237 762 aa4.76□□□□□ -1.65
BRCA1-212ENST00000473961 RRP1BQ14684 758 aaKnown RBP4.76□□□□□ -1.65
BRCA1-212ENST00000473961 GEN1Q17RS7 908 aa4.76□□□□□ -1.65
BRCA1-212ENST00000473961 TMEM196Q5HYL7 178 aa4.76□□□□□ -1.65
BRCA1-212ENST00000473961 ZNF618Q5T7W0 954 aa4.76□□□□□ -1.65
BRCA1-212ENST00000473961 B3GNTL1Q67FW5 361 aaPredicted RBP4.76□□□□□ -1.65
BRCA1-212ENST00000473961 CCDC144NLQ6NUI1 221 aa4.76□□□□□ -1.65
BRCA1-212ENST00000473961 LRRC55Q6ZSA7 311 aa4.76□□□□□ -1.65
BRCA1-212ENST00000473961 SYT13Q7L8C5 426 aa4.76□□□□□ -1.65
BRCA1-212ENST00000473961 P3H2Q8IVL5 708 aa4.76□□□□□ -1.65
BRCA1-212ENST00000473961 RFFLQ8WZ73 363 aa4.76□□□□□ -1.65
BRCA1-212ENST00000473961 C7orf26Q96N11 449 aa4.76□□□□□ -1.65
BRCA1-212ENST00000473961 PIGSQ96S52 555 aa4.76□□□□□ -1.65
BRCA1-212ENST00000473961 REEP2Q9BRK0 252 aa4.76□□□□□ -1.65
BRCA1-212ENST00000473961 PDCL3Q9H2J4 239 aa4.76□□□□□ -1.65
BRCA1-212ENST00000473961 AKIP1Q9NQ31 210 aa4.76□□□□□ -1.65
BRCA1-212ENST00000473961 FSCN3Q9NQT6 498 aa4.76□□□□□ -1.65
BRCA1-212ENST00000473961 TBC1D22BQ9NU19 505 aa4.76□□□□□ -1.65
BRCA1-212ENST00000473961 TBCCD1Q9NVR7 557 aa4.76□□□□□ -1.65
BRCA1-212ENST00000473961 VSX1Q9NZR4 365 aaPredicted RBP4.76□□□□□ -1.65
BRCA1-212ENST00000473961 AFG3L2Q9Y4W6 797 aa4.76□□□□□ -1.65
BRCA1-212ENST00000473961 GXYLT2A0PJZ3 443 aa4.75□□□□□ -1.65
BRCA1-212ENST00000473961 ANKRD18BA2A2Z9 1011 aa4.75□□□□□ -1.65
BRCA1-212ENST00000473961 MBD3L5A6NJ08 208 aaPredicted RBP4.75□□□□□ -1.65
BRCA1-212ENST00000473961 KIF28PB7ZC32 967 aa4.75□□□□□ -1.65
BRCA1-212ENST00000473961 ADM5C9JUS6 153 aa4.75□□□□□ -1.65
BRCA1-212ENST00000473961 DHHO43323 396 aa4.75□□□□□ -1.65
BRCA1-212ENST00000473961 ANP32CO43423 234 aa4.75□□□□□ -1.65
BRCA1-212ENST00000473961 CER1O95813 267 aa4.75□□□□□ -1.65
BRCA1-212ENST00000473961 ELANEP08246 267 aa4.75□□□□□ -1.65
BRCA1-212ENST00000473961 JUPP14923 745 aa4.75□□□□□ -1.65
BRCA1-212ENST00000473961 ZNF37AP17032 561 aaPredicted RBP4.75□□□□□ -1.65
BRCA1-212ENST00000473961 LAG3P18627 525 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms