RNA–Protein interactions for RNA: ENST00000473214.1

RTF1-203, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene RTF1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-203ENST00000473214 SH2D3CQ8N5H7 860 aa6.33□□□□□ -1.4
RTF1-203ENST00000473214 POMGNT2Q8NAT1 580 aa6.33□□□□□ -1.4
RTF1-203ENST00000473214 FBXO15Q8NCQ5 510 aaPredicted RBP6.33□□□□□ -1.4
RTF1-203ENST00000473214 KIF18AQ8NI77 898 aa6.33□□□□□ -1.4
RTF1-203ENST00000473214 NACC2Q96BF6 587 aa6.33□□□□□ -1.4
RTF1-203ENST00000473214 LRRC46Q96FV0 321 aa6.33□□□□□ -1.4
RTF1-203ENST00000473214 SNX22Q96L94 193 aa6.33□□□□□ -1.4
RTF1-203ENST00000473214 RMDN2Q96LZ7 410 aa6.33□□□□□ -1.4
RTF1-203ENST00000473214 CEP295NLQ96MC4 621 aa6.33□□□□□ -1.4
RTF1-203ENST00000473214 DPH2Q9BQC3 489 aaPredicted RBP6.33□□□□□ -1.4
RTF1-203ENST00000473214 REEP2Q9BRK0 252 aa6.33□□□□□ -1.4
RTF1-203ENST00000473214 REXO4Q9GZR2 422 aaKnown RBP6.33□□□□□ -1.4
RTF1-203ENST00000473214 USP44Q9H0E7 712 aa6.33□□□□□ -1.4
RTF1-203ENST00000473214 BRD8Q9H0E9 1235 aa6.33□□□□□ -1.4
RTF1-203ENST00000473214 TASP1Q9H6P5 420 aa6.33□□□□□ -1.4
RTF1-203ENST00000473214 VCPKMTQ9H867 229 aa6.33□□□□□ -1.4
RTF1-203ENST00000473214 TM9SF3Q9HD45 589 aa6.33□□□□□ -1.4
RTF1-203ENST00000473214 CD93Q9NPY3 652 aa6.33□□□□□ -1.4
RTF1-203ENST00000473214 MBNL3Q9NUK0 354 aaKnown RBP6.33□□□□□ -1.4
RTF1-203ENST00000473214 NMRK1Q9NWW6 199 aa6.33□□□□□ -1.4
RTF1-203ENST00000473214 STK32BQ9NY57 414 aa6.33□□□□□ -1.4
RTF1-203ENST00000473214 NINJ2Q9NZG7 142 aa6.33□□□□□ -1.4
RTF1-203ENST00000473214 SELENONQ9NZV5 590 aa6.33□□□□□ -1.4
RTF1-203ENST00000473214 MRPL15Q9P015 296 aaKnown RBP6.33□□□□□ -1.4
RTF1-203ENST00000473214 COL20A1Q9P218 1284 aa6.33□□□□□ -1.4
RTF1-203ENST00000473214 PI4KBQ9UBF8 816 aa6.33□□□□□ -1.4
RTF1-203ENST00000473214 FBXL21Q9UKT6 434 aa6.33□□□□□ -1.4
RTF1-203ENST00000473214 PIN4Q9Y237 131 aaKnown RBP6.33□□□□□ -1.4
RTF1-203ENST00000473214 FHOD1Q9Y613 1164 aa6.33□□□□□ -1.4
RTF1-203ENST00000473214 CFAP20Q9Y6A4 193 aaKnown RBP6.33□□□□□ -1.4
RTF1-203ENST00000473214 V9GYY5 206 aaPredicted RBP6.33□□□□□ -1.4
RTF1-203ENST00000473214 A0A1W2PQ09 198 aa6.32□□□□□ -1.4
RTF1-203ENST00000473214 A4D1N5 150 aa6.32□□□□□ -1.4
RTF1-203ENST00000473214 CCDC151A5D8V7 595 aa6.32□□□□□ -1.4
RTF1-203ENST00000473214 ZSCAN5CA6NGD5 496 aaPredicted RBP6.32□□□□□ -1.4
RTF1-203ENST00000473214 FAM47E-STBD1D6RA91 191 aa6.32□□□□□ -1.4
RTF1-203ENST00000473214 WNT9AO14904 365 aa6.32□□□□□ -1.4
RTF1-203ENST00000473214 SLC16A6O15403 523 aa6.32□□□□□ -1.4
RTF1-203ENST00000473214 TPOP07202 933 aa6.32□□□□□ -1.4
RTF1-203ENST00000473214 THBDP07204 575 aa6.32□□□□□ -1.4
RTF1-203ENST00000473214 RNASE1P07998 156 aaKnown RBP6.32□□□□□ -1.4
RTF1-203ENST00000473214 TMEM253P0C7T8 217 aa6.32□□□□□ -1.4
RTF1-203ENST00000473214 CCDC172P0C7W6 258 aa6.32□□□□□ -1.4
RTF1-203ENST00000473214 CD8BP10966 210 aa6.32□□□□□ -1.4
RTF1-203ENST00000473214 NPR1P16066 1061 aa6.32□□□□□ -1.4
RTF1-203ENST00000473214 ITIH2P19823 946 aa6.32□□□□□ -1.4
RTF1-203ENST00000473214 LTBRP36941 435 aa6.32□□□□□ -1.4
RTF1-203ENST00000473214 IL15P40933 162 aaPredicted RBP6.32□□□□□ -1.4
RTF1-203ENST00000473214 CAPZA2P47755 286 aa6.32□□□□□ -1.4
RTF1-203ENST00000473214 CPT1AP50416 773 aa6.32□□□□□ -1.4
RTF1-203ENST00000473214 LUMP51884 338 aaPredicted RBP6.32□□□□□ -1.4
RTF1-203ENST00000473214 MANFP55145 182 aaKnown RBP6.32□□□□□ -1.4
RTF1-203ENST00000473214 TGFB2P61812 414 aa6.32□□□□□ -1.4
RTF1-203ENST00000473214 RPS16P62249 146 aaKnown RBP6.32□□□□□ -1.4
RTF1-203ENST00000473214 DSC2Q02487 901 aa6.32□□□□□ -1.4
RTF1-203ENST00000473214 DCTN2Q13561 401 aaKnown RBP6.32□□□□□ -1.4
RTF1-203ENST00000473214 SSPNQ14714 243 aa6.32□□□□□ -1.4
RTF1-203ENST00000473214 SEC23BQ15437 767 aa6.32□□□□□ -1.4
RTF1-203ENST00000473214 EZH2Q15910 746 aaKnown RBP6.32□□□□□ -1.4
RTF1-203ENST00000473214 USP39Q53GS9 565 aaKnown RBP6.32□□□□□ -1.4
RTF1-203ENST00000473214 ERMARDQ5T6L9 678 aa6.32□□□□□ -1.4
RTF1-203ENST00000473214 ZBTB37Q5TC79 503 aa6.32□□□□□ -1.4
RTF1-203ENST00000473214 GARNL3Q5VVW2 1013 aa6.32□□□□□ -1.4
RTF1-203ENST00000473214 RRAGBQ5VZM2 374 aa6.32□□□□□ -1.4
RTF1-203ENST00000473214 OTUD7BQ6GQQ9 843 aa6.32□□□□□ -1.4
RTF1-203ENST00000473214 TRAT1Q6PIZ9 186 aa6.32□□□□□ -1.4
RTF1-203ENST00000473214 CYP20A1Q6UW02 462 aa6.32□□□□□ -1.4
RTF1-203ENST00000473214 CATSPERGQ6ZRH7 1159 aa6.32□□□□□ -1.4
RTF1-203ENST00000473214 C15orf52Q6ZUT6 534 aaKnown RBP6.32□□□□□ -1.4
RTF1-203ENST00000473214 RRAGAQ7L523 313 aa6.32□□□□□ -1.4
RTF1-203ENST00000473214 ZZZ3Q8IYH5 903 aa6.32□□□□□ -1.4
RTF1-203ENST00000473214 PDCL2Q8N4E4 241 aa6.32□□□□□ -1.4
RTF1-203ENST00000473214 AOPEPQ8N6M6 819 aa6.32□□□□□ -1.4
RTF1-203ENST00000473214 ANKRD53Q8N9V6 530 aa6.32□□□□□ -1.4
RTF1-203ENST00000473214 FAM71DQ8N9W8 422 aa6.32□□□□□ -1.4
RTF1-203ENST00000473214 GLIS1Q8NBF1 620 aa6.32□□□□□ -1.4
RTF1-203ENST00000473214 TNIP2Q8NFZ5 429 aa6.32□□□□□ -1.4
RTF1-203ENST00000473214 GPR150Q8NGU9 434 aa6.32□□□□□ -1.4
RTF1-203ENST00000473214 NETO1Q8TDF5 533 aa6.32□□□□□ -1.4
RTF1-203ENST00000473214 FAM168AQ92567 244 aa6.32□□□□□ -1.4
RTF1-203ENST00000473214 HDAC10Q969S8 669 aa6.32□□□□□ -1.4
RTF1-203ENST00000473214 FAM162AQ96A26 154 aa6.32□□□□□ -1.4
RTF1-203ENST00000473214 RMDN1Q96DB5 314 aa6.32□□□□□ -1.4
RTF1-203ENST00000473214 SUCLG2Q96I99 432 aa6.32□□□□□ -1.4
RTF1-203ENST00000473214 TCEANC2Q96MN5 208 aa6.32□□□□□ -1.4
RTF1-203ENST00000473214 RAB3IPQ96QF0 476 aaPredicted RBP6.32□□□□□ -1.4
RTF1-203ENST00000473214 TEX12Q9BXU0 123 aa6.32□□□□□ -1.4
RTF1-203ENST00000473214 WNT10AQ9GZT5 417 aa6.32□□□□□ -1.4
RTF1-203ENST00000473214 ABCG8Q9H221 673 aa6.32□□□□□ -1.4
RTF1-203ENST00000473214 PABPC3Q9H361 631 aaKnown RBP6.32□□□□□ -1.4
RTF1-203ENST00000473214 NOD2Q9HC29 1040 aa6.32□□□□□ -1.4
RTF1-203ENST00000473214 CRLF2Q9HC73 371 aa6.32□□□□□ -1.4
RTF1-203ENST00000473214 NECTIN3Q9NQS3 549 aa6.32□□□□□ -1.4
RTF1-203ENST00000473214 CNNM1Q9NRU3 951 aa6.32□□□□□ -1.4
RTF1-203ENST00000473214 LMBRD1Q9NUN5 540 aa6.32□□□□□ -1.4
RTF1-203ENST00000473214 ANO10Q9NW15 660 aa6.32□□□□□ -1.4
RTF1-203ENST00000473214 GPATCH2Q9NW75 528 aa6.32□□□□□ -1.4
RTF1-203ENST00000473214 DPP7Q9UHL4 492 aa6.32□□□□□ -1.4
RTF1-203ENST00000473214 ADAMTS6Q9UKP5 1117 aa6.32□□□□□ -1.4
RTF1-203ENST00000473214 VAV3Q9UKW4 847 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms