RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 ANKS1BQ7Z6G8 1248 aa2.92□□□□□ -1.94
XRN1-210ENST00000472697 CABP7Q86V35 215 aa2.92□□□□□ -1.94
XRN1-210ENST00000472697 IGDCC3Q8IVU1 814 aa2.92□□□□□ -1.94
XRN1-210ENST00000472697 TSPYL6Q8N831 410 aa2.92□□□□□ -1.94
XRN1-210ENST00000472697 ZCCHC14Q8WYQ9 949 aaKnown RBP2.92□□□□□ -1.94
XRN1-210ENST00000472697 GPHA2Q96T91 129 aa2.92□□□□□ -1.94
XRN1-210ENST00000472697 EYA3Q99504 573 aa2.92□□□□□ -1.94
XRN1-210ENST00000472697 OSBPL1AQ9BXW6 950 aa2.92□□□□□ -1.94
XRN1-210ENST00000472697 OR10A4Q9H209 315 aa2.92□□□□□ -1.94
XRN1-210ENST00000472697 SERHLQ9NQF3 203 aa2.92□□□□□ -1.94
XRN1-210ENST00000472697 MYO5CQ9NQX4 1742 aa2.92□□□□□ -1.94
XRN1-210ENST00000472697 SH3BP4Q9P0V3 963 aa2.92□□□□□ -1.94
XRN1-210ENST00000472697 CALCOCO1Q9P1Z2 691 aa2.92□□□□□ -1.94
XRN1-210ENST00000472697 KLHL14Q9P2G3 628 aa2.92□□□□□ -1.94
XRN1-210ENST00000472697 USP15Q9Y4E8 981 aaPredicted RBP2.92□□□□□ -1.94
XRN1-210ENST00000472697 PCDHB2Q9Y5E7 798 aa2.92□□□□□ -1.94
XRN1-210ENST00000472697 SNX14Q9Y5W7 946 aa2.92□□□□□ -1.94
XRN1-210ENST00000472697 LRRC7Q96NW7 1537 aa2.91□□□□□ -1.94
XRN1-210ENST00000472697 KDM5DQ9BY66 1539 aa2.91□□□□□ -1.94
XRN1-210ENST00000472697 ARHGAP10A1A4S6 786 aa2.91□□□□□ -1.94
XRN1-210ENST00000472697 PRR19A6NJB7 356 aa2.91□□□□□ -1.94
XRN1-210ENST00000472697 SH2B2O14492 632 aaPredicted RBP2.91□□□□□ -1.94
XRN1-210ENST00000472697 PIAS2O75928 621 aa2.91□□□□□ -1.94
XRN1-210ENST00000472697 OR2C1O95371 312 aa2.91□□□□□ -1.94
XRN1-210ENST00000472697 VIPP01282 170 aa2.91□□□□□ -1.94
XRN1-210ENST00000472697 URODP06132 367 aa2.91□□□□□ -1.94
XRN1-210ENST00000472697 MYCLP12524 364 aaPredicted RBP2.91□□□□□ -1.94
XRN1-210ENST00000472697 LIMS1P48059 325 aa2.91□□□□□ -1.94
XRN1-210ENST00000472697 GPR15P49685 360 aa2.91□□□□□ -1.94
XRN1-210ENST00000472697 KHDRBS1Q07666 443 aaKnown RBP eCLIP2.91□□□□□ -1.94
XRN1-210ENST00000472697 NSUN2Q08J23 767 aaKnown RBP eCLIP2.91□□□□□ -1.94
XRN1-210ENST00000472697 MPP3Q13368 585 aa2.91□□□□□ -1.94
XRN1-210ENST00000472697 HABP2Q14520 560 aaPredicted RBP2.91□□□□□ -1.94
XRN1-210ENST00000472697 RAB3GAP1Q15042 981 aa2.91□□□□□ -1.94
XRN1-210ENST00000472697 PPA1Q15181 289 aa2.91□□□□□ -1.94
XRN1-210ENST00000472697 RNF43Q68DV7 783 aa2.91□□□□□ -1.94
XRN1-210ENST00000472697 TTLL5Q6EMB2 1281 aa2.91□□□□□ -1.94
XRN1-210ENST00000472697 GALNT17Q6IS24 598 aa2.91□□□□□ -1.94
XRN1-210ENST00000472697 CYP20A1Q6UW02 462 aa2.91□□□□□ -1.94
XRN1-210ENST00000472697 PRR23CQ6ZRP0 262 aa2.91□□□□□ -1.94
XRN1-210ENST00000472697 ZNF365Q70YC5 407 aa2.91□□□□□ -1.94
XRN1-210ENST00000472697 CLEC14AQ86T13 490 aa2.91□□□□□ -1.94
XRN1-210ENST00000472697 AMIGO3Q86WK7 504 aa2.91□□□□□ -1.94
XRN1-210ENST00000472697 SYT12Q8IV01 421 aa2.91□□□□□ -1.94
XRN1-210ENST00000472697 DNERQ8NFT8 737 aa2.91□□□□□ -1.94
XRN1-210ENST00000472697 SMARCC2Q8TAQ2 1214 aa2.91□□□□□ -1.94
XRN1-210ENST00000472697 BPIFB1Q8TDL5 484 aa2.91□□□□□ -1.94
XRN1-210ENST00000472697 ZNF483Q8TF39 744 aaPredicted RBP2.91□□□□□ -1.94
XRN1-210ENST00000472697 ZNF384Q8TF68 577 aa2.91□□□□□ -1.94
XRN1-210ENST00000472697 BCL7CQ8WUZ0 217 aaPredicted RBP2.91□□□□□ -1.94
XRN1-210ENST00000472697 RNFT2Q96EX2 444 aa2.91□□□□□ -1.94
XRN1-210ENST00000472697 CNDP2Q96KP4 475 aaKnown RBP2.91□□□□□ -1.94
XRN1-210ENST00000472697 LINC00615Q96LM1 132 aaPredicted RBP2.91□□□□□ -1.94
XRN1-210ENST00000472697 UIMC1Q96RL1 719 aa2.91□□□□□ -1.94
XRN1-210ENST00000472697 HAPLN3Q96S86 360 aa2.91□□□□□ -1.94
XRN1-210ENST00000472697 SGPP1Q9BX95 441 aa2.91□□□□□ -1.94
XRN1-210ENST00000472697 MANSC1Q9H8J5 431 aa2.91□□□□□ -1.94
XRN1-210ENST00000472697 TMEM140Q9NV12 185 aa2.91□□□□□ -1.94
XRN1-210ENST00000472697 ZSCAN32Q9NX65 697 aa2.91□□□□□ -1.94
XRN1-210ENST00000472697 TBX20Q9UMR3 447 aa2.91□□□□□ -1.94
XRN1-210ENST00000472697 FAM135BQ49AJ0 1406 aa2.91□□□□□ -1.94
XRN1-210ENST00000472697 CARMIL1Q5VZK9 1371 aa2.91□□□□□ -1.94
XRN1-210ENST00000472697 MYO1CO00159 1063 aa2.91□□□□□ -1.94
XRN1-210ENST00000472697 COQ9O75208 318 aa2.91□□□□□ -1.94
XRN1-210ENST00000472697 CAMTA2O94983 1202 aa2.91□□□□□ -1.94
XRN1-210ENST00000472697 GOSR1O95249 250 aa2.91□□□□□ -1.94
XRN1-210ENST00000472697 FTCDO95954 541 aa2.91□□□□□ -1.94
XRN1-210ENST00000472697 ENO2P09104 434 aaPredicted RBP2.91□□□□□ -1.94
XRN1-210ENST00000472697 DRD1P21728 446 aa2.91□□□□□ -1.94
XRN1-210ENST00000472697 SCP2P22307 547 aa2.91□□□□□ -1.94
XRN1-210ENST00000472697 PTPN9P43378 593 aa2.91□□□□□ -1.94
XRN1-210ENST00000472697 SLFN5Q08AF3 891 aa2.91□□□□□ -1.94
XRN1-210ENST00000472697 ARHGEF7Q14155 803 aa2.91□□□□□ -1.94
XRN1-210ENST00000472697 LASP1Q14847 261 aaKnown RBP2.91□□□□□ -1.94
XRN1-210ENST00000472697 LEXMQ3ZCV2 418 aa2.91□□□□□ -1.94
XRN1-210ENST00000472697 ANKRD40Q6AI12 368 aa2.91□□□□□ -1.94
XRN1-210ENST00000472697 DCLRE1AQ6PJP8 1040 aa2.91□□□□□ -1.94
XRN1-210ENST00000472697 CLEC9AQ6UXN8 241 aa2.91□□□□□ -1.94
XRN1-210ENST00000472697 GPRIN1Q7Z2K8 1008 aa2.91□□□□□ -1.94
XRN1-210ENST00000472697 NETO2Q8NC67 525 aa2.91□□□□□ -1.94
XRN1-210ENST00000472697 NUDT10Q8NFP7 164 aa2.91□□□□□ -1.94
XRN1-210ENST00000472697 OR5M3Q8NGP4 307 aa2.91□□□□□ -1.94
XRN1-210ENST00000472697 TBC1D15Q8TC07 691 aa2.91□□□□□ -1.94
XRN1-210ENST00000472697 ALG3Q92685 438 aa2.91□□□□□ -1.94
XRN1-210ENST00000472697 NUDT11Q96G61 164 aa2.91□□□□□ -1.94
XRN1-210ENST00000472697 HRASLS5Q96KN8 279 aa2.91□□□□□ -1.94
XRN1-210ENST00000472697 HDHD5Q9BXW7 423 aa2.91□□□□□ -1.94
XRN1-210ENST00000472697 PCED1AQ9H1Q7 454 aa2.91□□□□□ -1.94
XRN1-210ENST00000472697 ABCF3Q9NUQ8 709 aa2.91□□□□□ -1.94
XRN1-210ENST00000472697 NSMCE4AQ9NXX6 385 aa2.91□□□□□ -1.94
XRN1-210ENST00000472697 CTNNAL1Q9UBT7 734 aa2.91□□□□□ -1.94
XRN1-210ENST00000472697 VPS51Q9UID3 782 aa2.91□□□□□ -1.94
XRN1-210ENST00000472697 MKL2Q9ULH7 1088 aa2.91□□□□□ -1.94
XRN1-210ENST00000472697 NEU2Q9Y3R4 380 aa2.91□□□□□ -1.94
XRN1-210ENST00000472697 IQGAP1P46940 1657 aa2.91□□□□□ -1.94
XRN1-210ENST00000472697 NEURL4Q96JN8 1562 aa2.91□□□□□ -1.94
XRN1-210ENST00000472697 DIP2CQ9Y2E4 1556 aa2.91□□□□□ -1.94
XRN1-210ENST00000472697 A2ML1A8K2U0 1454 aa2.9□□□□□ -1.94
XRN1-210ENST00000472697 ZNF518AQ6AHZ1 1483 aa2.9□□□□□ -1.94
XRN1-210ENST00000472697 A0A0G2JNJ9 132 aa2.9□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms