RNA–Protein interactions for RNA: ENST00000472045.1

IRF1-208, Transcript of interferon regulatory factor 1, humanhuman

TSL 2

Gene IRF1, Length 5,153 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-208ENST00000472045 KIRREL3Q8IZU9 778 aa12.67□□□□□ -0.38
IRF1-208ENST00000472045 EXD1Q8NHP7 514 aa12.67□□□□□ -0.38
IRF1-208ENST00000472045 RUBCNQ92622 972 aa12.67□□□□□ -0.38
IRF1-208ENST00000472045 VCPIP1Q96JH7 1222 aa12.67□□□□□ -0.38
IRF1-208ENST00000472045 ELAC2Q9BQ52 826 aaKnown RBP12.67□□□□□ -0.38
IRF1-208ENST00000472045 PACSIN1Q9BY11 444 aa12.67□□□□□ -0.38
IRF1-208ENST00000472045 SMARCAL1Q9NZC9 954 aa12.67□□□□□ -0.38
IRF1-208ENST00000472045 RPS6KL1Q9Y6S9 549 aa12.67□□□□□ -0.38
IRF1-208ENST00000472045 RGPD8O14715 1765 aaPredicted RBP12.66□□□□□ -0.38
IRF1-208ENST00000472045 SPATA31C1P0DKV0 1188 aa12.66□□□□□ -0.38
IRF1-208ENST00000472045 CCL5P13501 91 aa12.66□□□□□ -0.38
IRF1-208ENST00000472045 MZF1P28698 734 aaPredicted RBP12.66□□□□□ -0.38
IRF1-208ENST00000472045 BRCC3P46736 316 aa12.66□□□□□ -0.38
IRF1-208ENST00000472045 ACLYP53396 1101 aa12.66□□□□□ -0.38
IRF1-208ENST00000472045 PLCL1Q15111 1095 aa12.66□□□□□ -0.38
IRF1-208ENST00000472045 RGL4Q8IZJ4 473 aa12.66□□□□□ -0.38
IRF1-208ENST00000472045 CLEC4DQ8WXI8 215 aa12.66□□□□□ -0.38
IRF1-208ENST00000472045 KLHL29Q96CT2 875 aa12.66□□□□□ -0.38
IRF1-208ENST00000472045 PCMTD2Q9NV79 361 aa12.66□□□□□ -0.38
IRF1-208ENST00000472045 VAV3Q9UKW4 847 aa12.66□□□□□ -0.38
IRF1-208ENST00000472045 H2AFYO75367 372 aaKnown RBP12.66□□□□□ -0.38
IRF1-208ENST00000472045 VPS26AO75436 327 aa12.66□□□□□ -0.38
IRF1-208ENST00000472045 CHKAP35790 457 aa12.66□□□□□ -0.38
IRF1-208ENST00000472045 CBWD6Q4V339 395 aa12.66□□□□□ -0.38
IRF1-208ENST00000472045 CBWD3Q5JTY5 395 aa12.66□□□□□ -0.38
IRF1-208ENST00000472045 CBWD5Q5RIA9 395 aa12.66□□□□□ -0.38
IRF1-208ENST00000472045 TSHZ1Q6ZSZ6 1077 aa12.66□□□□□ -0.38
IRF1-208ENST00000472045 COG1Q8WTW3 980 aa12.66□□□□□ -0.38
IRF1-208ENST00000472045 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.66□□□□□ -0.38
IRF1-208ENST00000472045 TKTL2Q9H0I9 626 aa12.66□□□□□ -0.38
IRF1-208ENST00000472045 RASSF4Q9H2L5 321 aa12.66□□□□□ -0.38
IRF1-208ENST00000472045 CERS4Q9HA82 394 aa12.66□□□□□ -0.38
IRF1-208ENST00000472045 PPCSQ9HAB8 311 aa12.66□□□□□ -0.38
IRF1-208ENST00000472045 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.66□□□□□ -0.38
IRF1-208ENST00000472045 FGFR1OP2Q9NVK5 253 aa12.66□□□□□ -0.38
IRF1-208ENST00000472045 VANGL2Q9ULK5 521 aa12.66□□□□□ -0.38
IRF1-208ENST00000472045 PKN3Q6P5Z2 889 aa12.66□□□□□ -0.38
IRF1-208ENST00000472045 RD3Q7Z3Z2 195 aa12.66□□□□□ -0.38
IRF1-208ENST00000472045 NUP93Q8N1F7 819 aa12.66□□□□□ -0.38
IRF1-208ENST00000472045 WWOXQ9NZC7 414 aa12.66□□□□□ -0.38
IRF1-208ENST00000472045 STK39Q9UEW8 545 aa12.66□□□□□ -0.38
IRF1-208ENST00000472045 FBXO10Q9UK96 956 aa12.66□□□□□ -0.38
IRF1-208ENST00000472045 TFR2Q9UP52 801 aa12.66□□□□□ -0.38
IRF1-208ENST00000472045 RARGP13631 454 aa12.66□□□□□ -0.38
IRF1-208ENST00000472045 CDC25CP30307 473 aa12.66□□□□□ -0.38
IRF1-208ENST00000472045 ILDR2Q71H61 639 aa12.66□□□□□ -0.38
IRF1-208ENST00000472045 LRRC52Q8N7C0 313 aa12.66□□□□□ -0.38
IRF1-208ENST00000472045 APOL2Q9BQE5 337 aa12.66□□□□□ -0.38
IRF1-208ENST00000472045 C1QTNF7Q9BXJ2 289 aa12.66□□□□□ -0.38
IRF1-208ENST00000472045 FAM208AQ9UK61 1670 aaKnown RBP12.66□□□□□ -0.38
IRF1-208ENST00000472045 PLIN4Q96Q06 1357 aa12.65□□□□□ -0.38
IRF1-208ENST00000472045 F8VP50 259 aa12.65□□□□□ -0.38
IRF1-208ENST00000472045 MYL2P10916 166 aa12.65□□□□□ -0.38
IRF1-208ENST00000472045 GGCXP38435 758 aa12.65□□□□□ -0.38
IRF1-208ENST00000472045 HDAC4P56524 1084 aa12.65□□□□□ -0.38
IRF1-208ENST00000472045 PPP2R2AP63151 447 aa12.65□□□□□ -0.38
IRF1-208ENST00000472045 FPGSQ05932 587 aa12.65□□□□□ -0.38
IRF1-208ENST00000472045 PPP3CAQ08209 521 aa12.65□□□□□ -0.38
IRF1-208ENST00000472045 EIF2B5Q13144 721 aaKnown RBP12.65□□□□□ -0.38
IRF1-208ENST00000472045 FBXO38Q6PIJ6 1188 aa12.65□□□□□ -0.38
IRF1-208ENST00000472045 DUSP9Q99956 384 aaKnown RBP12.65□□□□□ -0.38
IRF1-208ENST00000472045 TRMT13Q9NUP7 481 aaKnown RBP12.65□□□□□ -0.38
IRF1-208ENST00000472045 UBA2Q9UBT2 640 aaPredicted RBP12.65□□□□□ -0.38
IRF1-208ENST00000472045 DCTN4Q9UJW0 460 aa12.65□□□□□ -0.38
IRF1-208ENST00000472045 ZNF142P52746 1687 aaPredicted RBP12.65□□□□□ -0.38
IRF1-208ENST00000472045 CDH16O75309 829 aa12.65□□□□□ -0.38
IRF1-208ENST00000472045 DLG4P78352 724 aa12.65□□□□□ -0.38
IRF1-208ENST00000472045 ZBTB41Q5SVQ8 909 aa12.65□□□□□ -0.38
IRF1-208ENST00000472045 ATG4AQ8WYN0 398 aa12.65□□□□□ -0.38
IRF1-208ENST00000472045 CCDC124Q96CT7 223 aaKnown RBP12.65□□□□□ -0.38
IRF1-208ENST00000472045 ZNF214Q9UL59 606 aaPredicted RBP12.65□□□□□ -0.38
IRF1-208ENST00000472045 DRG1Q9Y295 367 aaKnown RBP12.65□□□□□ -0.38
IRF1-208ENST00000472045 DERAQ9Y315 318 aa12.65□□□□□ -0.38
IRF1-208ENST00000472045 SHPRHQ149N8 1683 aa12.65□□□□□ -0.38
IRF1-208ENST00000472045 E2F8A0AVK6 867 aa12.65□□□□□ -0.38
IRF1-208ENST00000472045 NDUFS2O75306 463 aa12.65□□□□□ -0.38
IRF1-208ENST00000472045 FGF19O95750 216 aa12.65□□□□□ -0.38
IRF1-208ENST00000472045 SNRPAP09012 282 aaKnown RBP12.65□□□□□ -0.38
IRF1-208ENST00000472045 SPATA31D3P0C874 917 aa12.65□□□□□ -0.38
IRF1-208ENST00000472045 CNGA2Q16280 664 aa12.65□□□□□ -0.38
IRF1-208ENST00000472045 PSRC1Q6PGN9 363 aaPredicted RBP12.65□□□□□ -0.38
IRF1-208ENST00000472045 SPATA31D4Q6ZUB0 917 aa12.65□□□□□ -0.38
IRF1-208ENST00000472045 CCNJLQ8IV13 435 aa12.65□□□□□ -0.38
IRF1-208ENST00000472045 TOP6BLQ8N6T0 577 aa12.65□□□□□ -0.38
IRF1-208ENST00000472045 PPP1R16AQ96I34 528 aa12.65□□□□□ -0.38
IRF1-208ENST00000472045 TGS1Q96RS0 853 aaKnown RBP12.65□□□□□ -0.38
IRF1-208ENST00000472045 ERP44Q9BS26 406 aa12.65□□□□□ -0.38
IRF1-208ENST00000472045 C2orf49Q9BVC5 232 aaPredicted RBP12.65□□□□□ -0.38
IRF1-208ENST00000472045 GIMAP4Q9NUV9 329 aa12.65□□□□□ -0.38
IRF1-208ENST00000472045 COL20A1Q9P218 1284 aa12.65□□□□□ -0.38
IRF1-208ENST00000472045 PTCH2Q9Y6C5 1203 aa12.65□□□□□ -0.38
IRF1-208ENST00000472045 IGKV6D-41A0A0C4DH26 115 aa12.65□□□□□ -0.38
IRF1-208ENST00000472045 RAD51CO43502 376 aa12.65□□□□□ -0.38
IRF1-208ENST00000472045 CYP2A6P11509 494 aaPredicted RBP12.65□□□□□ -0.38
IRF1-208ENST00000472045 PDCLQ13371 301 aa12.65□□□□□ -0.38
IRF1-208ENST00000472045 NPAS4Q8IUM7 802 aa12.65□□□□□ -0.38
IRF1-208ENST00000472045 PDLIM2Q96JY6 352 aa12.65□□□□□ -0.38
IRF1-208ENST00000472045 HSFY1Q96LI6 401 aa12.65□□□□□ -0.38
IRF1-208ENST00000472045 ALG13Q9NP73 1137 aaKnown RBP12.65□□□□□ -0.38
IRF1-208ENST00000472045 FRMD3A2A2Y4 597 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms