RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 COL4A2P08572 1712 aa15.81■□□□□ 0.12
SNX13-205ENST00000471744 CHRNB2P17787 502 aa15.81■□□□□ 0.12
SNX13-205ENST00000471744 YWHAZP63104 245 aaKnown RBP15.81■□□□□ 0.12
SNX13-205ENST00000471744 KLHL30Q0D2K2 578 aa15.81■□□□□ 0.12
SNX13-205ENST00000471744 EFEMP1Q12805 493 aa15.81■□□□□ 0.12
SNX13-205ENST00000471744 NAA35Q5VZE5 725 aa15.81■□□□□ 0.12
SNX13-205ENST00000471744 OR6B2Q6IFH4 312 aa15.81■□□□□ 0.12
SNX13-205ENST00000471744 VSTM4Q8IW00 320 aa15.81■□□□□ 0.12
SNX13-205ENST00000471744 CLEC4CQ8WTT0 213 aa15.81■□□□□ 0.12
SNX13-205ENST00000471744 ATP2A3Q93084 1043 aa15.81■□□□□ 0.12
SNX13-205ENST00000471744 ASIC4Q96FT7 647 aa15.81■□□□□ 0.12
SNX13-205ENST00000471744 DCLK3Q9C098 648 aa15.81■□□□□ 0.12
SNX13-205ENST00000471744 C8orf33Q9H7E9 229 aaPredicted RBP15.81■□□□□ 0.12
SNX13-205ENST00000471744 POPDC2Q9HBU9 364 aa15.81■□□□□ 0.12
SNX13-205ENST00000471744 ARHGEF3Q9NR81 526 aa15.81■□□□□ 0.12
SNX13-205ENST00000471744 SEPT11Q9NVA2 429 aaKnown RBP15.81■□□□□ 0.12
SNX13-205ENST00000471744 RASAL2Q9UJF2 1139 aa15.81■□□□□ 0.12
SNX13-205ENST00000471744 ZNF510Q9Y2H8 683 aa15.81■□□□□ 0.12
SNX13-205ENST00000471744 HBS1LQ9Y450 684 aaKnown RBP15.81■□□□□ 0.12
SNX13-205ENST00000471744 MYOFQ9NZM1 2061 aa15.8■□□□□ 0.12
SNX13-205ENST00000471744 CAPN9O14815 690 aa15.8■□□□□ 0.12
SNX13-205ENST00000471744 NFATC1O95644 943 aa15.8■□□□□ 0.12
SNX13-205ENST00000471744 ERBB2P04626 1255 aa15.8■□□□□ 0.12
SNX13-205ENST00000471744 GYPCP04921 128 aa15.8■□□□□ 0.12
SNX13-205ENST00000471744 NCAM1P13591 858 aa15.8■□□□□ 0.12
SNX13-205ENST00000471744 TNFAIP3P21580 790 aa15.8■□□□□ 0.12
SNX13-205ENST00000471744 NSFP46459 744 aaKnown RBP15.8■□□□□ 0.12
SNX13-205ENST00000471744 ZXDBP98169 803 aa15.8■□□□□ 0.12
SNX13-205ENST00000471744 AMPD2Q01433 879 aa15.8■□□□□ 0.12
SNX13-205ENST00000471744 SLC6A3Q01959 620 aa15.8■□□□□ 0.12
SNX13-205ENST00000471744 CENPCQ03188 943 aa15.8■□□□□ 0.12
SNX13-205ENST00000471744 NR1H3Q13133 447 aa15.8■□□□□ 0.12
SNX13-205ENST00000471744 MLF2Q15773 248 aaPredicted RBP15.8■□□□□ 0.12
SNX13-205ENST00000471744 CLEC16AQ2KHT3 1053 aa15.8■□□□□ 0.12
SNX13-205ENST00000471744 ITPRIPL2Q3MIP1 535 aa15.8■□□□□ 0.12
SNX13-205ENST00000471744 SLC44A4Q53GD3 710 aa15.8■□□□□ 0.12
SNX13-205ENST00000471744 HFE2Q6ZVN8 426 aa15.8■□□□□ 0.12
SNX13-205ENST00000471744 HTR3DQ70Z44 454 aa15.8■□□□□ 0.12
SNX13-205ENST00000471744 SLC26A9Q7LBE3 791 aa15.8■□□□□ 0.12
SNX13-205ENST00000471744 BMP8AQ7Z5Y6 402 aa15.8■□□□□ 0.12
SNX13-205ENST00000471744 VPS36Q86VN1 386 aa15.8■□□□□ 0.12
SNX13-205ENST00000471744 GAS2L3Q86XJ1 694 aa15.8■□□□□ 0.12
SNX13-205ENST00000471744 MIB1Q86YT6 1006 aa15.8■□□□□ 0.12
SNX13-205ENST00000471744 CPA6Q8N4T0 437 aa15.8■□□□□ 0.12
SNX13-205ENST00000471744 TTC16Q8NEE8 873 aa15.8■□□□□ 0.12
SNX13-205ENST00000471744 RIN3Q8TB24 985 aa15.8■□□□□ 0.12
SNX13-205ENST00000471744 CPA5Q8WXQ8 436 aa15.8■□□□□ 0.12
SNX13-205ENST00000471744 EDEM1Q92611 657 aa15.8■□□□□ 0.12
SNX13-205ENST00000471744 PLD4Q96BZ4 506 aa15.8■□□□□ 0.12
SNX13-205ENST00000471744 TMEM51Q9NW97 253 aa15.8■□□□□ 0.12
SNX13-205ENST00000471744 WDR35Q9P2L0 1181 aa15.8■□□□□ 0.12
SNX13-205ENST00000471744 NUDT5Q9UKK9 219 aa15.8■□□□□ 0.12
SNX13-205ENST00000471744 MIA3Q5JRA6 1907 aa15.79■□□□□ 0.12
SNX13-205ENST00000471744 MAN2B1O00754 1011 aa15.79■□□□□ 0.12
SNX13-205ENST00000471744 MDM4O15151 490 aa15.79■□□□□ 0.12
SNX13-205ENST00000471744 GPR37L1O60883 481 aa15.79■□□□□ 0.12
SNX13-205ENST00000471744 CALB1P05937 261 aa15.79■□□□□ 0.12
SNX13-205ENST00000471744 UNGP13051 313 aaPredicted RBP15.79■□□□□ 0.12
SNX13-205ENST00000471744 MMP8P22894 467 aa15.79■□□□□ 0.12
SNX13-205ENST00000471744 CASP14P31944 242 aa15.79■□□□□ 0.12
SNX13-205ENST00000471744 NNTQ13423 1086 aa15.79■□□□□ 0.12
SNX13-205ENST00000471744 RUNX3Q13761 415 aa15.79■□□□□ 0.12
SNX13-205ENST00000471744 TSR1Q2NL82 804 aaKnown RBP15.79■□□□□ 0.12
SNX13-205ENST00000471744 OLFML1Q6UWY5 402 aa15.79■□□□□ 0.12
SNX13-205ENST00000471744 FAM183BPQ6ZVS7 135 aa15.79■□□□□ 0.12
SNX13-205ENST00000471744 SIX5Q8N196 739 aa15.79■□□□□ 0.12
SNX13-205ENST00000471744 CPLX3Q8WVH0 158 aa15.79■□□□□ 0.12
SNX13-205ENST00000471744 EXOC4Q96A65 974 aa15.79■□□□□ 0.12
SNX13-205ENST00000471744 ZFYVE19Q96K21 471 aa15.79■□□□□ 0.12
SNX13-205ENST00000471744 SERPINB11Q96P15 392 aa15.79■□□□□ 0.12
SNX13-205ENST00000471744 MFSD1Q9H3U5 465 aa15.79■□□□□ 0.12
SNX13-205ENST00000471744 HAUS4Q9H6D7 363 aa15.79■□□□□ 0.12
SNX13-205ENST00000471744 RRN3Q9NYV6 651 aa15.79■□□□□ 0.12
SNX13-205ENST00000471744 TJP2Q9UDY2 1190 aa15.79■□□□□ 0.12
SNX13-205ENST00000471744 CA14Q9ULX7 337 aa15.79■□□□□ 0.12
SNX13-205ENST00000471744 MRPS17Q9Y2R5 130 aaKnown RBP15.79■□□□□ 0.12
SNX13-205ENST00000471744 SLC12A8A0AV02 714 aa15.78■□□□□ 0.12
SNX13-205ENST00000471744 STC2O76061 302 aa15.78■□□□□ 0.12
SNX13-205ENST00000471744 SERPING1P05155 500 aa15.78■□□□□ 0.12
SNX13-205ENST00000471744 IRF1P10914 325 aa15.78■□□□□ 0.12
SNX13-205ENST00000471744 STARD6P59095 220 aa15.78■□□□□ 0.12
SNX13-205ENST00000471744 RING1Q06587 406 aa15.78■□□□□ 0.12
SNX13-205ENST00000471744 EML3Q32P44 896 aa15.78■□□□□ 0.12
SNX13-205ENST00000471744 TDRD12Q587J7 1177 aaKnown RBP15.78■□□□□ 0.12
SNX13-205ENST00000471744 TMEM31Q5JXX7 168 aa15.78■□□□□ 0.12
SNX13-205ENST00000471744 ARCQ7LC44 396 aa15.78■□□□□ 0.12
SNX13-205ENST00000471744 RALGPS2Q86X27 583 aaPredicted RBP15.78■□□□□ 0.12
SNX13-205ENST00000471744 XYLT1Q86Y38 959 aa15.78■□□□□ 0.12
SNX13-205ENST00000471744 PHF13Q86YI8 300 aaPredicted RBP15.78■□□□□ 0.12
SNX13-205ENST00000471744 DRC7Q8IY82 874 aa15.78■□□□□ 0.12
SNX13-205ENST00000471744 SLC2A13Q96QE2 648 aa15.78■□□□□ 0.12
SNX13-205ENST00000471744 PCDHB18PQ96TA0 734 aa15.78■□□□□ 0.12
SNX13-205ENST00000471744 SYT11Q9BT88 431 aa15.78■□□□□ 0.12
SNX13-205ENST00000471744 EBF3Q9H4W6 596 aa15.78■□□□□ 0.12
SNX13-205ENST00000471744 ECT2Q9H8V3 914 aa15.78■□□□□ 0.12
SNX13-205ENST00000471744 HPS4Q9NQG7 708 aa15.78■□□□□ 0.12
SNX13-205ENST00000471744 HEBP1Q9NRV9 189 aa15.78■□□□□ 0.12
SNX13-205ENST00000471744 WNT6Q9Y6F9 365 aa15.78■□□□□ 0.12
SNX13-205ENST00000471744 KRBA1A5PL33 1030 aa15.77■□□□□ 0.12
SNX13-205ENST00000471744 PRR33A8MZF0 331 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms