RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 ARSAP15289 507 aa16■□□□□ 0.15
SDC3-203ENST00000471567 FERP16591 822 aa16■□□□□ 0.15
SDC3-203ENST00000471567 AOC1P19801 751 aa16■□□□□ 0.15
SDC3-203ENST00000471567 PBX1P40424 430 aa16■□□□□ 0.15
SDC3-203ENST00000471567 TAF3Q5VWG9 929 aa16■□□□□ 0.15
SDC3-203ENST00000471567 MSANTD2Q6P1R3 559 aa16■□□□□ 0.15
SDC3-203ENST00000471567 MIB1Q86YT6 1006 aa16■□□□□ 0.15
SDC3-203ENST00000471567 ADGRG2Q8IZP9 1017 aa16■□□□□ 0.15
SDC3-203ENST00000471567 IPO4Q8TEX9 1081 aaKnown RBP16■□□□□ 0.15
SDC3-203ENST00000471567 CLEC4CQ8WTT0 213 aa16■□□□□ 0.15
SDC3-203ENST00000471567 BAP1Q92560 729 aa16■□□□□ 0.15
SDC3-203ENST00000471567 EDEM1Q92611 657 aa16■□□□□ 0.15
SDC3-203ENST00000471567 IQCDQ96DY2 449 aa16■□□□□ 0.15
SDC3-203ENST00000471567 LTB4R2Q9NPC1 389 aa16■□□□□ 0.15
SDC3-203ENST00000471567 ASNSD1Q9NWL6 643 aa16■□□□□ 0.15
SDC3-203ENST00000471567 RASAL2Q9UJF2 1139 aa16■□□□□ 0.15
SDC3-203ENST00000471567 TICRRQ7Z2Z1 1910 aa16■□□□□ 0.15
SDC3-203ENST00000471567 F5P12259 2224 aa15.99■□□□□ 0.15
SDC3-203ENST00000471567 GREM1O60565 184 aa15.99■□□□□ 0.15
SDC3-203ENST00000471567 GLI1P08151 1106 aa15.99■□□□□ 0.15
SDC3-203ENST00000471567 MMEP08473 750 aa15.99■□□□□ 0.15
SDC3-203ENST00000471567 IRF1P10914 325 aa15.99■□□□□ 0.15
SDC3-203ENST00000471567 AVPR2P30518 371 aa15.99■□□□□ 0.15
SDC3-203ENST00000471567 CTHP32929 405 aa15.99■□□□□ 0.15
SDC3-203ENST00000471567 NUBP1P53384 320 aa15.99■□□□□ 0.15
SDC3-203ENST00000471567 EFHC1Q5JVL4 640 aa15.99■□□□□ 0.15
SDC3-203ENST00000471567 TRIM72Q6ZMU5 477 aa15.99■□□□□ 0.15
SDC3-203ENST00000471567 ZDHHC17Q8IUH5 632 aa15.99■□□□□ 0.15
SDC3-203ENST00000471567 MSANTD4Q8NCY6 345 aa15.99■□□□□ 0.15
SDC3-203ENST00000471567 FAM3CQ92520 227 aa15.99■□□□□ 0.15
SDC3-203ENST00000471567 DCLK3Q9C098 648 aa15.99■□□□□ 0.15
SDC3-203ENST00000471567 TTYH3Q9C0H2 523 aa15.99■□□□□ 0.15
SDC3-203ENST00000471567 IFNKQ9P0W0 207 aa15.99■□□□□ 0.15
SDC3-203ENST00000471567 ZNF510Q9Y2H8 683 aa15.99■□□□□ 0.15
SDC3-203ENST00000471567 SIT1Q9Y3P8 196 aa15.99■□□□□ 0.15
SDC3-203ENST00000471567 HBS1LQ9Y450 684 aaKnown RBP15.99■□□□□ 0.15
SDC3-203ENST00000471567 ZDBF2Q9HCK1 2354 aa15.99■□□□□ 0.15
SDC3-203ENST00000471567 SLC12A8A0AV02 714 aa15.98■□□□□ 0.15
SDC3-203ENST00000471567 OTOL1A6NHN0 477 aaPredicted RBP15.98■□□□□ 0.15
SDC3-203ENST00000471567 FAM170BA6NMN3 283 aa15.98■□□□□ 0.15
SDC3-203ENST00000471567 NCAM2O15394 837 aa15.98■□□□□ 0.15
SDC3-203ENST00000471567 CBFA2T2O43439 604 aa15.98■□□□□ 0.15
SDC3-203ENST00000471567 STC2O76061 302 aa15.98■□□□□ 0.15
SDC3-203ENST00000471567 CYP1A1P04798 512 aaPredicted RBP15.98■□□□□ 0.15
SDC3-203ENST00000471567 CHRNB2P17787 502 aa15.98■□□□□ 0.15
SDC3-203ENST00000471567 GABRB2P47870 512 aa15.98■□□□□ 0.15
SDC3-203ENST00000471567 YWHAZP63104 245 aaKnown RBP15.98■□□□□ 0.15
SDC3-203ENST00000471567 NOMO3P69849 1222 aa15.98■□□□□ 0.15
SDC3-203ENST00000471567 FMO1Q01740 532 aa15.98■□□□□ 0.15
SDC3-203ENST00000471567 UBXN2BQ14CS0 331 aa15.98■□□□□ 0.15
SDC3-203ENST00000471567 PTPN20Q4JDL3 420 aa15.98■□□□□ 0.15
SDC3-203ENST00000471567 ERICH1Q86X53 443 aa15.98■□□□□ 0.15
SDC3-203ENST00000471567 RNF214Q8ND24 703 aa15.98■□□□□ 0.15
SDC3-203ENST00000471567 PJA1Q8NG27 643 aa15.98■□□□□ 0.15
SDC3-203ENST00000471567 TTC8Q8TAM2 541 aa15.98■□□□□ 0.15
SDC3-203ENST00000471567 SLC20A1Q8WUM9 679 aa15.98■□□□□ 0.15
SDC3-203ENST00000471567 WBP2Q969T9 261 aa15.98■□□□□ 0.15
SDC3-203ENST00000471567 EXOC4Q96A65 974 aa15.98■□□□□ 0.15
SDC3-203ENST00000471567 FAM149B1Q96BN6 582 aa15.98■□□□□ 0.15
SDC3-203ENST00000471567 PLD4Q96BZ4 506 aa15.98■□□□□ 0.15
SDC3-203ENST00000471567 FOXQ1Q9C009 403 aa15.98■□□□□ 0.15
SDC3-203ENST00000471567 SYNCQ9H7C4 482 aa15.98■□□□□ 0.15
SDC3-203ENST00000471567 POPDC2Q9HBU9 364 aa15.98■□□□□ 0.15
SDC3-203ENST00000471567 TJP2Q9UDY2 1190 aa15.98■□□□□ 0.15
SDC3-203ENST00000471567 A0A1W2PQJ5 194 aa15.97■□□□□ 0.15
SDC3-203ENST00000471567 PI15O43692 258 aa15.97■□□□□ 0.15
SDC3-203ENST00000471567 ADH1CP00326 375 aa15.97■□□□□ 0.15
SDC3-203ENST00000471567 ERBB2P04626 1255 aa15.97■□□□□ 0.15
SDC3-203ENST00000471567 FYNP06241 537 aa15.97■□□□□ 0.15
SDC3-203ENST00000471567 NCAM1P13591 858 aa15.97■□□□□ 0.15
SDC3-203ENST00000471567 CD72P21854 359 aa15.97■□□□□ 0.15
SDC3-203ENST00000471567 TARSP26639 723 aaKnown RBP15.97■□□□□ 0.15
SDC3-203ENST00000471567 GJA4P35212 333 aa15.97■□□□□ 0.15
SDC3-203ENST00000471567 SCNN1AP37088 669 aa15.97■□□□□ 0.15
SDC3-203ENST00000471567 MAGEA9P43362 315 aa15.97■□□□□ 0.15
SDC3-203ENST00000471567 SOX9P48436 509 aa15.97■□□□□ 0.15
SDC3-203ENST00000471567 VCPP55072 806 aaKnown RBP15.97■□□□□ 0.15
SDC3-203ENST00000471567 ARID5AQ03989 594 aa15.97■□□□□ 0.15
SDC3-203ENST00000471567 DHCR24Q15392 516 aa15.97■□□□□ 0.15
SDC3-203ENST00000471567 TRIP4Q15650 581 aaPredicted RBP15.97■□□□□ 0.15
SDC3-203ENST00000471567 OR6B2Q6IFH4 312 aa15.97■□□□□ 0.15
SDC3-203ENST00000471567 OLFML1Q6UWY5 402 aa15.97■□□□□ 0.15
SDC3-203ENST00000471567 Q6ZNB5 142 aa15.97■□□□□ 0.15
SDC3-203ENST00000471567 TOGARAM2Q6ZUX3 1019 aa15.97■□□□□ 0.15
SDC3-203ENST00000471567 IRF2BP2Q7Z5L9 587 aa15.97■□□□□ 0.15
SDC3-203ENST00000471567 BBS7Q8IWZ6 715 aa15.97■□□□□ 0.15
SDC3-203ENST00000471567 ZNF687Q8N1G0 1237 aa15.97■□□□□ 0.15
SDC3-203ENST00000471567 TMEM105Q8N8V8 129 aa15.97■□□□□ 0.15
SDC3-203ENST00000471567 C18orf8Q96DM3 657 aa15.97■□□□□ 0.15
SDC3-203ENST00000471567 XPO4Q9C0E2 1151 aaKnown RBP15.97■□□□□ 0.15
SDC3-203ENST00000471567 NUCKS1Q9H1E3 243 aaKnown RBP15.97■□□□□ 0.15
SDC3-203ENST00000471567 AIPL1Q9NZN9 384 aa15.97■□□□□ 0.15
SDC3-203ENST00000471567 SFMBT1Q9UHJ3 866 aa15.97■□□□□ 0.15
SDC3-203ENST00000471567 LRRC53A6NM62 1247 aa15.96■□□□□ 0.15
SDC3-203ENST00000471567 TRDMT1O14717 391 aaKnown RBP15.96■□□□□ 0.15
SDC3-203ENST00000471567 CAPN9O14815 690 aa15.96■□□□□ 0.15
SDC3-203ENST00000471567 HSF2BPO75031 334 aa15.96■□□□□ 0.15
SDC3-203ENST00000471567 CYP17A1P05093 508 aa15.96■□□□□ 0.15
SDC3-203ENST00000471567 SLC6A3Q01959 620 aa15.96■□□□□ 0.15
SDC3-203ENST00000471567 NNTQ13423 1086 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms