RNA–Protein interactions for RNA: ENST00000471044.1

CCNL1-213, Transcript of cyclin L1, humanhuman

TSL 2

Gene CCNL1, Length 753 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-213ENST00000471044 SMPD4Q9NXE4 827 aa13.17□□□□□ -0.3
CCNL1-213ENST00000471044 CFAP97Q9P2B7 532 aa13.17□□□□□ -0.3
CCNL1-213ENST00000471044 TBC1D14Q9P2M4 693 aa13.17□□□□□ -0.3
CCNL1-213ENST00000471044 GADD45BO75293 160 aaPredicted RBP13.16□□□□□ -0.3
CCNL1-213ENST00000471044 CYP17A1P05093 508 aa13.16□□□□□ -0.3
CCNL1-213ENST00000471044 SH3BP2P78314 561 aa13.16□□□□□ -0.3
CCNL1-213ENST00000471044 DHCR24Q15392 516 aa13.16□□□□□ -0.3
CCNL1-213ENST00000471044 ZNF394Q53GI3 561 aa13.16□□□□□ -0.3
CCNL1-213ENST00000471044 PPP1R26Q5T8A7 1209 aaPredicted RBP13.16□□□□□ -0.3
CCNL1-213ENST00000471044 FOXR2Q6PJQ5 311 aa13.16□□□□□ -0.3
CCNL1-213ENST00000471044 GPRIN1Q7Z2K8 1008 aa13.16□□□□□ -0.3
CCNL1-213ENST00000471044 SLC4A11Q8NBS3 891 aa13.16□□□□□ -0.3
CCNL1-213ENST00000471044 HPS1Q92902 700 aa13.16□□□□□ -0.3
CCNL1-213ENST00000471044 SLC35C1Q96A29 364 aa13.16□□□□□ -0.3
CCNL1-213ENST00000471044 OTUB2Q96DC9 234 aa13.16□□□□□ -0.3
CCNL1-213ENST00000471044 TMEM176AQ96HP8 235 aa13.16□□□□□ -0.3
CCNL1-213ENST00000471044 DUSP16Q9BY84 665 aa13.16□□□□□ -0.3
CCNL1-213ENST00000471044 CISHQ9NSE2 258 aa13.16□□□□□ -0.3
CCNL1-213ENST00000471044 GMPR2Q9P2T1 348 aaKnown RBP13.16□□□□□ -0.3
CCNL1-213ENST00000471044 NCDNQ9UBB6 729 aa13.16□□□□□ -0.3
CCNL1-213ENST00000471044 ARMCX3Q9UH62 379 aaPredicted RBP13.16□□□□□ -0.3
CCNL1-213ENST00000471044 SCML2Q9UQR0 700 aa13.16□□□□□ -0.3
CCNL1-213ENST00000471044 BAHCC1Q9P281 2608 aa13.16□□□□□ -0.3
CCNL1-213ENST00000471044 CCDC163A0A0D9SF12 145 aa13.15□□□□□ -0.3
CCNL1-213ENST00000471044 SIAH2O43255 324 aa13.15□□□□□ -0.3
CCNL1-213ENST00000471044 TLR5O60602 858 aa13.15□□□□□ -0.3
CCNL1-213ENST00000471044 ACO1P21399 889 aaKnown RBP13.15□□□□□ -0.3
CCNL1-213ENST00000471044 EIF2DP41214 584 aaKnown RBP13.15□□□□□ -0.3
CCNL1-213ENST00000471044 PGFP49763 221 aa13.15□□□□□ -0.3
CCNL1-213ENST00000471044 KIF11P52732 1056 aa13.15□□□□□ -0.3
CCNL1-213ENST00000471044 RAD23BP54727 409 aa13.15□□□□□ -0.3
CCNL1-213ENST00000471044 KCNH2Q12809 1159 aa13.15□□□□□ -0.3
CCNL1-213ENST00000471044 MORC3Q14149 939 aa13.15□□□□□ -0.3
CCNL1-213ENST00000471044 ARHGAP17Q68EM7 881 aa13.15□□□□□ -0.3
CCNL1-213ENST00000471044 RHBDF2Q6PJF5 856 aa13.15□□□□□ -0.3
CCNL1-213ENST00000471044 GPR161Q8N6U8 529 aaKnown RBP13.15□□□□□ -0.3
CCNL1-213ENST00000471044 CCDC26Q8TAB7 109 aa13.15□□□□□ -0.3
CCNL1-213ENST00000471044 SECISBP2LQ93073 1101 aaKnown RBP13.15□□□□□ -0.3
CCNL1-213ENST00000471044 HEXIM2Q96MH2 286 aaKnown RBP13.15□□□□□ -0.3
CCNL1-213ENST00000471044 CYLDQ9NQC7 956 aa13.15□□□□□ -0.3
CCNL1-213ENST00000471044 RAB23Q9ULC3 237 aa13.15□□□□□ -0.3
CCNL1-213ENST00000471044 SLC8A2Q9UPR5 921 aa13.15□□□□□ -0.3
CCNL1-213ENST00000471044 SH3BP1Q9Y3L3 701 aa13.15□□□□□ -0.3
CCNL1-213ENST00000471044 CNOT1A5YKK6 2376 aaKnown RBP13.14□□□□□ -0.31
CCNL1-213ENST00000471044 BICDL2A1A5D9 508 aa13.14□□□□□ -0.31
CCNL1-213ENST00000471044 PMM2O15305 246 aa13.14□□□□□ -0.31
CCNL1-213ENST00000471044 BMP6P22004 513 aa13.14□□□□□ -0.31
CCNL1-213ENST00000471044 HOXC13P31276 330 aa13.14□□□□□ -0.31
CCNL1-213ENST00000471044 ATP5C1P36542 298 aaKnown RBP13.14□□□□□ -0.31
CCNL1-213ENST00000471044 FMO5P49326 533 aa13.14□□□□□ -0.31
CCNL1-213ENST00000471044 YWHAEP62258 255 aaKnown RBP13.14□□□□□ -0.31
CCNL1-213ENST00000471044 SIM2Q14190 667 aaPredicted RBP13.14□□□□□ -0.31
CCNL1-213ENST00000471044 HEATR6Q6AI08 1181 aaKnown RBP13.14□□□□□ -0.31
CCNL1-213ENST00000471044 LAIR1Q6GTX8 287 aa13.14□□□□□ -0.31
CCNL1-213ENST00000471044 TTI2Q6NXR4 508 aa13.14□□□□□ -0.31
CCNL1-213ENST00000471044 KLHDC10Q6PID8 442 aa13.14□□□□□ -0.31
CCNL1-213ENST00000471044 SYT13Q7L8C5 426 aa13.14□□□□□ -0.31
CCNL1-213ENST00000471044 CCDC186Q7Z3E2 898 aa13.14□□□□□ -0.31
CCNL1-213ENST00000471044 ZNF276Q8N554 614 aa13.14□□□□□ -0.31
CCNL1-213ENST00000471044 CAMKK1Q8N5S9 505 aa13.14□□□□□ -0.31
CCNL1-213ENST00000471044 EHBP1Q8NDI1 1231 aa13.14□□□□□ -0.31
CCNL1-213ENST00000471044 RPLP0P6Q8NHW5 317 aa13.14□□□□□ -0.31
CCNL1-213ENST00000471044 JAKMIP2Q96AA8 810 aa13.14□□□□□ -0.31
CCNL1-213ENST00000471044 ACDQ96AP0 544 aa13.14□□□□□ -0.31
CCNL1-213ENST00000471044 ARID3AQ99856 593 aa13.14□□□□□ -0.31
CCNL1-213ENST00000471044 KLF16Q9BXK1 252 aaPredicted RBP13.14□□□□□ -0.31
CCNL1-213ENST00000471044 UBXN6Q9BZV1 441 aa13.14□□□□□ -0.31
CCNL1-213ENST00000471044 NMUR1Q9HB89 426 aa13.14□□□□□ -0.31
CCNL1-213ENST00000471044 OSER1Q9NX31 292 aa13.14□□□□□ -0.31
CCNL1-213ENST00000471044 GMEB2Q9UKD1 530 aa13.14□□□□□ -0.31
CCNL1-213ENST00000471044 USP3Q9Y6I4 520 aa13.14□□□□□ -0.31
CCNL1-213ENST00000471044 ATRXP46100 2492 aa13.14□□□□□ -0.31
CCNL1-213ENST00000471044 K7EQS6 105 aa13.13□□□□□ -0.31
CCNL1-213ENST00000471044 SCAMP3O14828 347 aaKnown RBP13.13□□□□□ -0.31
CCNL1-213ENST00000471044 CYP26A1O43174 497 aa13.13□□□□□ -0.31
CCNL1-213ENST00000471044 ADH1CP00326 375 aa13.13□□□□□ -0.31
CCNL1-213ENST00000471044 ADH5P11766 374 aa13.13□□□□□ -0.31
CCNL1-213ENST00000471044 TBXAS1P24557 533 aaPredicted RBP13.13□□□□□ -0.31
CCNL1-213ENST00000471044 GAD2Q05329 585 aa13.13□□□□□ -0.31
CCNL1-213ENST00000471044 SRSF5Q13243 272 aaKnown RBP13.13□□□□□ -0.31
CCNL1-213ENST00000471044 CUL2Q13617 745 aa13.13□□□□□ -0.31
CCNL1-213ENST00000471044 CCDC40Q4G0X9 1142 aa13.13□□□□□ -0.31
CCNL1-213ENST00000471044 LY6G5CQ5SRR4 150 aa13.13□□□□□ -0.31
CCNL1-213ENST00000471044 KLHL10Q6JEL2 608 aa13.13□□□□□ -0.31
CCNL1-213ENST00000471044 PRR23BQ6ZRT6 265 aa13.13□□□□□ -0.31
CCNL1-213ENST00000471044 HTR3DQ70Z44 454 aa13.13□□□□□ -0.31
CCNL1-213ENST00000471044 UBR7Q8N806 425 aa13.13□□□□□ -0.31
CCNL1-213ENST00000471044 USP33Q8TEY7 942 aa13.13□□□□□ -0.31
CCNL1-213ENST00000471044 NELFBQ8WX92 580 aa13.13□□□□□ -0.31
CCNL1-213ENST00000471044 WBP2Q969T9 261 aa13.13□□□□□ -0.31
CCNL1-213ENST00000471044 PNKPQ96T60 521 aa13.13□□□□□ -0.31
CCNL1-213ENST00000471044 NACA2Q9H009 215 aa13.13□□□□□ -0.31
CCNL1-213ENST00000471044 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.13□□□□□ -0.31
CCNL1-213ENST00000471044 NUP205Q92621 2012 aa13.13□□□□□ -0.31
CCNL1-213ENST00000471044 PLXND1Q9Y4D7 1925 aa13.13□□□□□ -0.31
CCNL1-213ENST00000471044 THADAQ6YHU6 1953 aa13.12□□□□□ -0.31
CCNL1-213ENST00000471044 CEP192Q8TEP8 1941 aa13.12□□□□□ -0.31
CCNL1-213ENST00000471044 A0A0A0MRY4 1105 aa13.12□□□□□ -0.31
CCNL1-213ENST00000471044 A0A1W2PQH9 124 aa13.12□□□□□ -0.31
CCNL1-213ENST00000471044 CFAP99D6REC4 459 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms