RNA–Protein interactions for RNA: ENST00000470824.1

PRPF3-204, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 898 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-204ENST00000470824 CHRM2P08172 466 aa4.62□□□□□ -1.67
PRPF3-204ENST00000470824 DLDP09622 509 aaKnown RBP4.62□□□□□ -1.67
PRPF3-204ENST00000470824 XBP1P17861 261 aa4.62□□□□□ -1.67
PRPF3-204ENST00000470824 RXRAP19793 462 aa4.62□□□□□ -1.67
PRPF3-204ENST00000470824 DRD1P21728 446 aa4.62□□□□□ -1.67
PRPF3-204ENST00000470824 CNTFP26441 200 aa4.62□□□□□ -1.67
PRPF3-204ENST00000470824 SERPINA4P29622 427 aa4.62□□□□□ -1.67
PRPF3-204ENST00000470824 GKP32189 559 aa4.62□□□□□ -1.67
PRPF3-204ENST00000470824 MCM2P49736 904 aa4.62□□□□□ -1.67
PRPF3-204ENST00000470824 CLCN2P51788 898 aa4.62□□□□□ -1.67
PRPF3-204ENST00000470824 PDE1AP54750 535 aa4.62□□□□□ -1.67
PRPF3-204ENST00000470824 BLOC1S1P78537 153 aa4.62□□□□□ -1.67
PRPF3-204ENST00000470824 TLE2Q04725 743 aa4.62□□□□□ -1.67
PRPF3-204ENST00000470824 SEMA3BQ13214 749 aa4.62□□□□□ -1.67
PRPF3-204ENST00000470824 LY6G5CQ5SRR4 150 aa4.62□□□□□ -1.67
PRPF3-204ENST00000470824 INTS11Q5TA45 600 aaKnown RBP4.62□□□□□ -1.67
PRPF3-204ENST00000470824 TTC22Q5TAA0 569 aa4.62□□□□□ -1.67
PRPF3-204ENST00000470824 CCDC144NLQ6NUI1 221 aa4.62□□□□□ -1.67
PRPF3-204ENST00000470824 KCNV1Q6PIU1 500 aa4.62□□□□□ -1.67
PRPF3-204ENST00000470824 TMED8Q6PL24 325 aaPredicted RBP4.62□□□□□ -1.67
PRPF3-204ENST00000470824 PIK3AP1Q6ZUJ8 805 aa4.62□□□□□ -1.67
PRPF3-204ENST00000470824 KRT27Q7Z3Y8 459 aa4.62□□□□□ -1.67
PRPF3-204ENST00000470824 P3H2Q8IVL5 708 aa4.62□□□□□ -1.67
PRPF3-204ENST00000470824 TMEM57Q8N5G2 664 aa4.62□□□□□ -1.67
PRPF3-204ENST00000470824 ASB10Q8WXI3 467 aa4.62□□□□□ -1.67
PRPF3-204ENST00000470824 ASB12Q8WXK4 309 aa4.62□□□□□ -1.67
PRPF3-204ENST00000470824 MAELQ96JY0 434 aaKnown RBP4.62□□□□□ -1.67
PRPF3-204ENST00000470824 Q96MF0 132 aa4.62□□□□□ -1.67
PRPF3-204ENST00000470824 COG8Q96MW5 612 aa4.62□□□□□ -1.67
PRPF3-204ENST00000470824 PAAF1Q9BRP4 392 aa4.62□□□□□ -1.67
PRPF3-204ENST00000470824 C1QTNF3Q9BXJ4 246 aa4.62□□□□□ -1.67
PRPF3-204ENST00000470824 SERHL2Q9H4I8 314 aa4.62□□□□□ -1.67
PRPF3-204ENST00000470824 RXFP3Q9NSD7 469 aa4.62□□□□□ -1.67
PRPF3-204ENST00000470824 CCNL1Q9UK58 526 aaPredicted RBP4.62□□□□□ -1.67
PRPF3-204ENST00000470824 SLC13A4Q9UKG4 626 aa4.62□□□□□ -1.67
PRPF3-204ENST00000470824 EYA2O00167 538 aa4.61□□□□□ -1.67
PRPF3-204ENST00000470824 MPPED1O15442 326 aa4.61□□□□□ -1.67
PRPF3-204ENST00000470824 CTIFO43310 598 aaKnown RBP4.61□□□□□ -1.67
PRPF3-204ENST00000470824 PMPCBO75439 489 aa4.61□□□□□ -1.67
PRPF3-204ENST00000470824 C1SP09871 688 aa4.61□□□□□ -1.67
PRPF3-204ENST00000470824 JUPP14923 745 aa4.61□□□□□ -1.67
PRPF3-204ENST00000470824 CREB1P16220 341 aa4.61□□□□□ -1.67
PRPF3-204ENST00000470824 ZFXP17010 805 aaPredicted RBP4.61□□□□□ -1.67
PRPF3-204ENST00000470824 ZNF20P17024 532 aa4.61□□□□□ -1.67
PRPF3-204ENST00000470824 MMP8P22894 467 aa4.61□□□□□ -1.67
PRPF3-204ENST00000470824 FOLR3P41439 243 aa4.61□□□□□ -1.67
PRPF3-204ENST00000470824 TPTEP56180 551 aa4.61□□□□□ -1.67
PRPF3-204ENST00000470824 SUMO2P61956 95 aaKnown RBP4.61□□□□□ -1.67
PRPF3-204ENST00000470824 SF3A3Q12874 501 aaKnown RBP eCLIP4.61□□□□□ -1.679e-6■■□□□ 12.4
PRPF3-204ENST00000470824 DDX10Q13206 875 aaKnown RBP4.61□□□□□ -1.67
PRPF3-204ENST00000470824 BFSP2Q13515 415 aa4.61□□□□□ -1.67
PRPF3-204ENST00000470824 SLC12A1Q13621 1099 aa4.61□□□□□ -1.67
PRPF3-204ENST00000470824 KCNJ12Q14500 433 aa4.61□□□□□ -1.67
PRPF3-204ENST00000470824 CDSNQ15517 529 aa4.61□□□□□ -1.67
PRPF3-204ENST00000470824 MAPRE1Q15691 268 aaKnown RBP4.61□□□□□ -1.67
PRPF3-204ENST00000470824 SMAD1Q15797 465 aaKnown RBP4.61□□□□□ -1.67
PRPF3-204ENST00000470824 NBPF8Q3BBV2 869 aa4.61□□□□□ -1.67
PRPF3-204ENST00000470824 TBRG1Q3YBR2 411 aa4.61□□□□□ -1.67
PRPF3-204ENST00000470824 AASDHQ4L235 1098 aaPredicted RBP4.61□□□□□ -1.67
PRPF3-204ENST00000470824 PLAC9Q5JTB6 97 aa4.61□□□□□ -1.67
PRPF3-204ENST00000470824 FAM90A2PQ658T7 463 aa4.61□□□□□ -1.67
PRPF3-204ENST00000470824 RHOUQ7L0Q8 258 aa4.61□□□□□ -1.67
PRPF3-204ENST00000470824 LRRC71Q8N4P6 559 aa4.61□□□□□ -1.67
PRPF3-204ENST00000470824 SIRT6Q8N6T7 355 aa4.61□□□□□ -1.67
PRPF3-204ENST00000470824 SIMC1Q8NDZ2 872 aa4.61□□□□□ -1.67
PRPF3-204ENST00000470824 SLC22A17Q8WUG5 538 aa4.61□□□□□ -1.67
PRPF3-204ENST00000470824 CACTINQ8WUQ7 758 aaKnown RBP4.61□□□□□ -1.67
PRPF3-204ENST00000470824 HERVK_113Q902F9 699 aa4.61□□□□□ -1.67
PRPF3-204ENST00000470824 REXO5Q96IC2 774 aaKnown RBP4.61□□□□□ -1.67
PRPF3-204ENST00000470824 PBKQ96KB5 322 aa4.61□□□□□ -1.67
PRPF3-204ENST00000470824 WDR11Q9BZH6 1224 aa4.61□□□□□ -1.67
PRPF3-204ENST00000470824 CCDC134Q9H6E4 229 aa4.61□□□□□ -1.67
PRPF3-204ENST00000470824 CHODLQ9H9P2 273 aa4.61□□□□□ -1.67
PRPF3-204ENST00000470824 PRDM16Q9HAZ2 1276 aa4.61□□□□□ -1.67
PRPF3-204ENST00000470824 NOD2Q9HC29 1040 aa4.61□□□□□ -1.67
PRPF3-204ENST00000470824 WASH6PQ9NQA3 447 aa4.61□□□□□ -1.67
PRPF3-204ENST00000470824 G6PC2Q9NQR9 355 aa4.61□□□□□ -1.67
PRPF3-204ENST00000470824 VPS45Q9NRW7 570 aa4.61□□□□□ -1.67
PRPF3-204ENST00000470824 RASSF1Q9NS23 344 aa4.61□□□□□ -1.67
PRPF3-204ENST00000470824 LIN7CQ9NUP9 197 aaKnown RBP4.61□□□□□ -1.67
PRPF3-204ENST00000470824 FBXO28Q9NVF7 368 aa4.61□□□□□ -1.67
PRPF3-204ENST00000470824 GGA3Q9NZ52 723 aa4.61□□□□□ -1.67
PRPF3-204ENST00000470824 IFT80Q9P2H3 777 aaPredicted RBP4.61□□□□□ -1.67
PRPF3-204ENST00000470824 DKK3Q9UBP4 350 aa4.61□□□□□ -1.67
PRPF3-204ENST00000470824 GXYLT2A0PJZ3 443 aa4.6□□□□□ -1.67
PRPF3-204ENST00000470824 WDR27A2RRH5 827 aa4.6□□□□□ -1.67
PRPF3-204ENST00000470824 VWC2LB2RUY7 222 aa4.6□□□□□ -1.67
PRPF3-204ENST00000470824 J3KRW8 73 aa4.6□□□□□ -1.67
PRPF3-204ENST00000470824 CES2O00748 559 aa4.6□□□□□ -1.67
PRPF3-204ENST00000470824 HOXC11O43248 304 aaPredicted RBP4.6□□□□□ -1.67
PRPF3-204ENST00000470824 FOXD2O60548 495 aaPredicted RBP4.6□□□□□ -1.67
PRPF3-204ENST00000470824 TFRCP02786 760 aaKnown RBP4.6□□□□□ -1.67
PRPF3-204ENST00000470824 NR2F6P10588 404 aa4.6□□□□□ -1.67
PRPF3-204ENST00000470824 ZNF37AP17032 561 aaPredicted RBP4.6□□□□□ -1.67
PRPF3-204ENST00000470824 RBM5P52756 815 aaKnown RBP eCLIP4.6□□□□□ -1.67
PRPF3-204ENST00000470824 UBE3AQ05086 875 aa4.6□□□□□ -1.67
PRPF3-204ENST00000470824 G3BP1Q13283 466 aaKnown RBP eCLIP4.6□□□□□ -1.67
PRPF3-204ENST00000470824 TRPC3Q13507 836 aa4.6□□□□□ -1.67
PRPF3-204ENST00000470824 TUBA3CQ13748 450 aa4.6□□□□□ -1.67
PRPF3-204ENST00000470824 PTPAQ15257 358 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms