RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 ACEP12821 1306 aa4.93□□□□□ -1.62
COL9A1-206ENST00000470652 KIF1AQ12756 1690 aa4.92□□□□□ -1.62
COL9A1-206ENST00000470652 ALS2Q96Q42 1657 aa4.92□□□□□ -1.62
COL9A1-206ENST00000470652 ANKRD26Q9UPS8 1709 aa4.92□□□□□ -1.62
COL9A1-206ENST00000470652 MED1Q15648 1581 aaPredicted RBP4.92□□□□□ -1.62
COL9A1-206ENST00000470652 RGPD2P0DJD1 1756 aa4.92□□□□□ -1.62
COL9A1-206ENST00000470652 TARM1B6A8C7 271 aa4.92□□□□□ -1.62
COL9A1-206ENST00000470652 TJP3O95049 919 aa4.92□□□□□ -1.62
COL9A1-206ENST00000470652 NPSP0C0P6 89 aa4.92□□□□□ -1.62
COL9A1-206ENST00000470652 TNNT2P45379 298 aaPredicted RBP4.92□□□□□ -1.62
COL9A1-206ENST00000470652 TPTEP56180 551 aa4.92□□□□□ -1.62
COL9A1-206ENST00000470652 RPS16P62249 146 aaKnown RBP4.92□□□□□ -1.62
COL9A1-206ENST00000470652 GALEQ14376 348 aa4.92□□□□□ -1.62
COL9A1-206ENST00000470652 SLC29A2Q14542 456 aa4.92□□□□□ -1.62
COL9A1-206ENST00000470652 CCDC184Q52MB2 194 aa4.92□□□□□ -1.62
COL9A1-206ENST00000470652 PCID2Q5JVF3 399 aa4.92□□□□□ -1.62
COL9A1-206ENST00000470652 CC2D1BQ5T0F9 858 aaKnown RBP4.92□□□□□ -1.62
COL9A1-206ENST00000470652 ZDHHC24Q6UX98 284 aa4.92□□□□□ -1.62
COL9A1-206ENST00000470652 ZNF788Q6ZQV5 615 aa4.92□□□□□ -1.62
COL9A1-206ENST00000470652 CAND1Q86VP6 1230 aaKnown RBP4.92□□□□□ -1.62
COL9A1-206ENST00000470652 SESTD1Q86VW0 696 aa4.92□□□□□ -1.62
COL9A1-206ENST00000470652 SMCR8Q8TEV9 937 aaPredicted RBP4.92□□□□□ -1.62
COL9A1-206ENST00000470652 HASPINQ8TF76 798 aa4.92□□□□□ -1.62
COL9A1-206ENST00000470652 IPCEF1Q8WWN9 437 aaPredicted RBP4.92□□□□□ -1.62
COL9A1-206ENST00000470652 TIFAQ96CG3 184 aa4.92□□□□□ -1.62
COL9A1-206ENST00000470652 STRBPQ96SI9 672 aaKnown RBP4.92□□□□□ -1.62
COL9A1-206ENST00000470652 DPCDQ9BVM2 203 aaPredicted RBP4.92□□□□□ -1.62
COL9A1-206ENST00000470652 STK31Q9BXU1 1019 aa4.92□□□□□ -1.62
COL9A1-206ENST00000470652 BTBD1Q9H0C5 482 aa4.92□□□□□ -1.62
COL9A1-206ENST00000470652 DHX36Q9H2U1 1008 aaKnown RBP4.92□□□□□ -1.62
COL9A1-206ENST00000470652 DDX21Q9NR30 783 aaKnown RBP eCLIP4.92□□□□□ -1.62
COL9A1-206ENST00000470652 ADARB2Q9NS39 739 aaKnown RBP4.92□□□□□ -1.62
COL9A1-206ENST00000470652 DNMT3BQ9UBC3 853 aaKnown RBP4.92□□□□□ -1.62
COL9A1-206ENST00000470652 HDAC9Q9UKV0 1011 aa4.92□□□□□ -1.62
COL9A1-206ENST00000470652 GABRQQ9UN88 632 aa4.92□□□□□ -1.62
COL9A1-206ENST00000470652 SNX14Q9Y5W7 946 aa4.92□□□□□ -1.62
COL9A1-206ENST00000470652 AOX1Q06278 1338 aa4.92□□□□□ -1.62
COL9A1-206ENST00000470652 PEAK1Q9H792 1746 aa4.92□□□□□ -1.62
COL9A1-206ENST00000470652 LTN1O94822 1766 aa4.91□□□□□ -1.62
COL9A1-206ENST00000470652 USP6P35125 1406 aa4.91□□□□□ -1.62
COL9A1-206ENST00000470652 CPSF1Q10570 1443 aaKnown RBP4.91□□□□□ -1.62
COL9A1-206ENST00000470652 ANKARQ7Z5J8 1434 aa4.91□□□□□ -1.62
COL9A1-206ENST00000470652 PHRF1Q9P1Y6 1649 aaKnown RBP4.91□□□□□ -1.62
COL9A1-206ENST00000470652 MAP2P11137 1827 aaKnown RBP4.91□□□□□ -1.62
COL9A1-206ENST00000470652 FOXN3O00409 490 aaPredicted RBP4.91□□□□□ -1.62
COL9A1-206ENST00000470652 RGS10O43665 173 aa4.91□□□□□ -1.62
COL9A1-206ENST00000470652 RBMXL2O75526 392 aaKnown RBP4.91□□□□□ -1.62
COL9A1-206ENST00000470652 INMTO95050 263 aa4.91□□□□□ -1.62
COL9A1-206ENST00000470652 RASAL1O95294 804 aa4.91□□□□□ -1.62
COL9A1-206ENST00000470652 TXNP10599 105 aaKnown RBP4.91□□□□□ -1.62
COL9A1-206ENST00000470652 ENGP17813 658 aa4.91□□□□□ -1.62
COL9A1-206ENST00000470652 BCAT1P54687 386 aa4.91□□□□□ -1.62
COL9A1-206ENST00000470652 ARHGEF7Q14155 803 aa4.91□□□□□ -1.62
COL9A1-206ENST00000470652 LY6KQ17RY6 165 aa4.91□□□□□ -1.62
COL9A1-206ENST00000470652 PTCHD3Q3KNS1 767 aa4.91□□□□□ -1.62
COL9A1-206ENST00000470652 CACHD1Q5VU97 1274 aa4.91□□□□□ -1.62
COL9A1-206ENST00000470652 Q6ZWC4 215 aa4.91□□□□□ -1.62
COL9A1-206ENST00000470652 RAB11FIP4Q86YS3 637 aa4.91□□□□□ -1.62
COL9A1-206ENST00000470652 YAF2Q8IY57 180 aa4.91□□□□□ -1.62
COL9A1-206ENST00000470652 KRT78Q8N1N4 520 aa4.91□□□□□ -1.62
COL9A1-206ENST00000470652 SDR16C5Q8N3Y7 309 aa4.91□□□□□ -1.62
COL9A1-206ENST00000470652 ABHD11Q8NFV4 315 aa4.91□□□□□ -1.62
COL9A1-206ENST00000470652 TMEM171Q8WVE6 324 aa4.91□□□□□ -1.62
COL9A1-206ENST00000470652 C8orf48Q96LL4 319 aa4.91□□□□□ -1.62
COL9A1-206ENST00000470652 C17orf80Q9BSJ5 609 aa4.91□□□□□ -1.62
COL9A1-206ENST00000470652 FSD1LQ9BXM9 530 aa4.91□□□□□ -1.62
COL9A1-206ENST00000470652 CHST8Q9H2A9 424 aa4.91□□□□□ -1.62
COL9A1-206ENST00000470652 ADAMTS5Q9UNA0 930 aa4.91□□□□□ -1.62
COL9A1-206ENST00000470652 USP22Q9UPT9 525 aa4.91□□□□□ -1.62
COL9A1-206ENST00000470652 TBC1D30Q9Y2I9 924 aa4.91□□□□□ -1.62
COL9A1-206ENST00000470652 KTN1Q86UP2 1357 aaKnown RBP4.91□□□□□ -1.62
COL9A1-206ENST00000470652 DCCP43146 1447 aa4.9□□□□□ -1.62
COL9A1-206ENST00000470652 SSH2Q76I76 1423 aa4.9□□□□□ -1.62
COL9A1-206ENST00000470652 H7C4K7 107 aa4.9□□□□□ -1.63
COL9A1-206ENST00000470652 PSMD9O00233 223 aa4.9□□□□□ -1.63
COL9A1-206ENST00000470652 ZNF213O14771 459 aa4.9□□□□□ -1.63
COL9A1-206ENST00000470652 PRKCGP05129 697 aa4.9□□□□□ -1.63
COL9A1-206ENST00000470652 EPHA3P29320 983 aa4.9□□□□□ -1.63
COL9A1-206ENST00000470652 HSPA1LP34931 641 aa4.9□□□□□ -1.63
COL9A1-206ENST00000470652 PTDSS1P48651 473 aaKnown RBP4.9□□□□□ -1.63
COL9A1-206ENST00000470652 PROK1P58294 105 aa4.9□□□□□ -1.63
COL9A1-206ENST00000470652 HOXA4Q00056 320 aaPredicted RBP4.9□□□□□ -1.63
COL9A1-206ENST00000470652 NPY5RQ15761 445 aa4.9□□□□□ -1.63
COL9A1-206ENST00000470652 ZKSCAN2Q63HK3 967 aa4.9□□□□□ -1.63
COL9A1-206ENST00000470652 SLC9A4Q6AI14 798 aa4.9□□□□□ -1.63
COL9A1-206ENST00000470652 NGDNQ8NEJ9 315 aaKnown RBP4.9□□□□□ -1.63
COL9A1-206ENST00000470652 SEMA6DQ8NFY4 1073 aa4.9□□□□□ -1.63
COL9A1-206ENST00000470652 PHKBQ93100 1093 aa4.9□□□□□ -1.63
COL9A1-206ENST00000470652 UNKQ9C0B0 810 aaKnown RBP4.9□□□□□ -1.63
COL9A1-206ENST00000470652 FAM83DQ9H4H8 585 aa4.9□□□□□ -1.63
COL9A1-206ENST00000470652 SH3BP4Q9P0V3 963 aa4.9□□□□□ -1.63
COL9A1-206ENST00000470652 ITGB1BP2Q9UKP3 347 aa4.9□□□□□ -1.63
COL9A1-206ENST00000470652 PCDHGB6Q9Y5F9 930 aa4.9□□□□□ -1.63
COL9A1-206ENST00000470652 POLR2AP24928 1970 aaKnown RBP4.9□□□□□ -1.63
COL9A1-206ENST00000470652 POLR3AO14802 1390 aaPredicted RBP4.9□□□□□ -1.63
COL9A1-206ENST00000470652 AHDC1Q5TGY3 1603 aaPredicted RBP4.9□□□□□ -1.63
COL9A1-206ENST00000470652 ANKRD36BQ8N2N9 1353 aa4.9□□□□□ -1.63
COL9A1-206ENST00000470652 AQP7P3A6NL99 342 aa4.89□□□□□ -1.63
COL9A1-206ENST00000470652 RRP9O43818 475 aaKnown RBP4.89□□□□□ -1.63
COL9A1-206ENST00000470652 SRGAP2O75044 1071 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms