RNA–Protein interactions for RNA: ENST00000470495.1

HOXB3-205, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 4,208 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-205ENST00000470495 PDLIM7Q9NR12 457 aa17.13■□□□□ 0.33
HOXB3-205ENST00000470495 KLHL14Q9P2G3 628 aa17.13■□□□□ 0.33
HOXB3-205ENST00000470495 ATP11BQ9Y2G3 1177 aa17.13■□□□□ 0.33
HOXB3-205ENST00000470495 GOLGA8RI6L899 631 aa17.13■□□□□ 0.33
HOXB3-205ENST00000470495 C11orf74Q86VG3 221 aa17.13■□□□□ 0.33
HOXB3-205ENST00000470495 KATNAL2Q8IYT4 538 aa17.13■□□□□ 0.33
HOXB3-205ENST00000470495 C1orf127Q8N9H9 656 aa17.13■□□□□ 0.33
HOXB3-205ENST00000470495 JOSD2Q8TAC2 188 aa17.13■□□□□ 0.33
HOXB3-205ENST00000470495 ZC3H15Q8WU90 426 aaKnown RBP17.13■□□□□ 0.33
HOXB3-205ENST00000470495 ASB7Q9H672 318 aa17.13■□□□□ 0.33
HOXB3-205ENST00000470495 LRRC19Q9H756 370 aa17.13■□□□□ 0.33
HOXB3-205ENST00000470495 DMAP1Q9NPF5 467 aaPredicted RBP17.13■□□□□ 0.33
HOXB3-205ENST00000470495 USP18Q9UMW8 372 aa17.13■□□□□ 0.33
HOXB3-205ENST00000470495 TDRKHQ9Y2W6 561 aaKnown RBP17.13■□□□□ 0.33
HOXB3-205ENST00000470495 NRXN2Q9P2S2 1712 aa17.13■□□□□ 0.33
HOXB3-205ENST00000470495 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.13■□□□□ 0.33
HOXB3-205ENST00000470495 CYP1A1P04798 512 aaPredicted RBP17.13■□□□□ 0.33
HOXB3-205ENST00000470495 HADHBP55084 474 aaKnown RBP17.13■□□□□ 0.33
HOXB3-205ENST00000470495 MTHFD1LQ6UB35 978 aa17.13■□□□□ 0.33
HOXB3-205ENST00000470495 RRAGCQ9HB90 399 aa17.13■□□□□ 0.33
HOXB3-205ENST00000470495 SERPINI2O75830 405 aa17.12■□□□□ 0.33
HOXB3-205ENST00000470495 PTPN20Q4JDL3 420 aa17.12■□□□□ 0.33
HOXB3-205ENST00000470495 GNASQ5JWF2 1037 aa17.12■□□□□ 0.33
HOXB3-205ENST00000470495 APPL2Q8NEU8 664 aa17.12■□□□□ 0.33
HOXB3-205ENST00000470495 CALML6Q8TD86 181 aa17.12■□□□□ 0.33
HOXB3-205ENST00000470495 LENG1Q96BZ8 264 aaPredicted RBP17.12■□□□□ 0.33
HOXB3-205ENST00000470495 CTNNAL1Q9UBT7 734 aa17.12■□□□□ 0.33
HOXB3-205ENST00000470495 TCP11X1B4DZS4 312 aa17.12■□□□□ 0.33
HOXB3-205ENST00000470495 FAM107AO95990 144 aa17.12■□□□□ 0.33
HOXB3-205ENST00000470495 GNL1P36915 607 aaPredicted RBP17.12■□□□□ 0.33
HOXB3-205ENST00000470495 CCDC153Q494R4 210 aa17.12■□□□□ 0.33
HOXB3-205ENST00000470495 SCUBE3Q8IX30 993 aa17.12■□□□□ 0.33
HOXB3-205ENST00000470495 TMEM130Q8N3G9 435 aa17.12■□□□□ 0.33
HOXB3-205ENST00000470495 GABPB2Q8TAK5 448 aaPredicted RBP17.12■□□□□ 0.33
HOXB3-205ENST00000470495 RAB6BQ9NRW1 208 aa17.12■□□□□ 0.33
HOXB3-205ENST00000470495 E5RJQ4 531 aa17.12■□□□□ 0.33
HOXB3-205ENST00000470495 CDH16O75309 829 aa17.12■□□□□ 0.33
HOXB3-205ENST00000470495 SUN1O94901 812 aa17.12■□□□□ 0.33
HOXB3-205ENST00000470495 SEMA3DO95025 777 aa17.12■□□□□ 0.33
HOXB3-205ENST00000470495 MBTD1Q05BQ5 628 aa17.12■□□□□ 0.33
HOXB3-205ENST00000470495 MRPL28Q13084 256 aaKnown RBP17.12■□□□□ 0.33
HOXB3-205ENST00000470495 UTS2BQ765I0 119 aa17.12■□□□□ 0.33
HOXB3-205ENST00000470495 CD302Q8IX05 232 aa17.12■□□□□ 0.33
HOXB3-205ENST00000470495 TTC39CQ8N584 583 aa17.12■□□□□ 0.33
HOXB3-205ENST00000470495 ANLNQ9NQW6 1124 aa17.12■□□□□ 0.33
HOXB3-205ENST00000470495 STOML1Q9UBI4 398 aa17.12■□□□□ 0.33
HOXB3-205ENST00000470495 C15orf59Q2T9L4 293 aaPredicted RBP17.11■□□□□ 0.33
HOXB3-205ENST00000470495 PLEKHA7Q6IQ23 1121 aa17.11■□□□□ 0.33
HOXB3-205ENST00000470495 CLIP3Q96DZ5 547 aa17.11■□□□□ 0.33
HOXB3-205ENST00000470495 TTC4O95801 387 aa17.11■□□□□ 0.33
HOXB3-205ENST00000470495 EDN1P05305 212 aa17.11■□□□□ 0.33
HOXB3-205ENST00000470495 CACNA2D1P54289 1103 aa17.11■□□□□ 0.33
HOXB3-205ENST00000470495 MRPS15P82914 257 aaKnown RBP17.11■□□□□ 0.33
HOXB3-205ENST00000470495 STAT4Q14765 748 aa17.11■□□□□ 0.33
HOXB3-205ENST00000470495 TARBP2Q15633 366 aaKnown RBP17.11■□□□□ 0.33
HOXB3-205ENST00000470495 ZNF560Q96MR9 790 aa17.11■□□□□ 0.33
HOXB3-205ENST00000470495 SLITRK1Q96PX8 696 aa17.11■□□□□ 0.33
HOXB3-205ENST00000470495 FERD3LQ96RJ6 166 aa17.11■□□□□ 0.33
HOXB3-205ENST00000470495 SYT11Q9BT88 431 aa17.11■□□□□ 0.33
HOXB3-205ENST00000470495 XPO7Q9UIA9 1087 aaKnown RBP17.11■□□□□ 0.33
HOXB3-205ENST00000470495 EFR3BQ9Y2G0 817 aa17.11■□□□□ 0.33
HOXB3-205ENST00000470495 TMEM98Q9Y2Y6 226 aa17.11■□□□□ 0.33
HOXB3-205ENST00000470495 CNTNAP2Q9UHC6 1331 aa17.11■□□□□ 0.33
HOXB3-205ENST00000470495 TMEM191CA6NGB0 347 aa17.11■□□□□ 0.33
HOXB3-205ENST00000470495 NOTOA8MTQ0 251 aa17.11■□□□□ 0.33
HOXB3-205ENST00000470495 MTA2O94776 668 aa17.11■□□□□ 0.33
HOXB3-205ENST00000470495 PIGRP01833 764 aa17.11■□□□□ 0.33
HOXB3-205ENST00000470495 MT-ND3P03897 115 aa17.11■□□□□ 0.33
HOXB3-205ENST00000470495 APRTP07741 180 aa17.11■□□□□ 0.33
HOXB3-205ENST00000470495 TCF4P15884 667 aa17.11■□□□□ 0.33
HOXB3-205ENST00000470495 ACO1P21399 889 aaKnown RBP17.11■□□□□ 0.33
HOXB3-205ENST00000470495 MIPP30301 263 aa17.11■□□□□ 0.33
HOXB3-205ENST00000470495 PTGIRP43119 386 aa17.11■□□□□ 0.33
HOXB3-205ENST00000470495 TTC25Q96NG3 672 aa17.11■□□□□ 0.33
HOXB3-205ENST00000470495 KLF6Q99612 283 aaPredicted RBP17.11■□□□□ 0.33
HOXB3-205ENST00000470495 MYCP01106 439 aaPredicted RBP17.1■□□□□ 0.33
HOXB3-205ENST00000470495 DCAF4L1Q3SXM0 396 aa17.1■□□□□ 0.33
HOXB3-205ENST00000470495 FYB2Q5VWT5 728 aa17.1■□□□□ 0.33
HOXB3-205ENST00000470495 PCGF5Q86SE9 256 aa17.1■□□□□ 0.33
HOXB3-205ENST00000470495 TLK2Q86UE8 772 aa17.1■□□□□ 0.33
HOXB3-205ENST00000470495 CPXM1Q96SM3 734 aa17.1■□□□□ 0.33
HOXB3-205ENST00000470495 CYP3A43Q9HB55 503 aa17.1■□□□□ 0.33
HOXB3-205ENST00000470495 TJP2Q9UDY2 1190 aa17.1■□□□□ 0.33
HOXB3-205ENST00000470495 APOL1O14791 398 aa17.1■□□□□ 0.33
HOXB3-205ENST00000470495 SEC24DO94855 1032 aaPredicted RBP17.1■□□□□ 0.33
HOXB3-205ENST00000470495 HOXC6P09630 235 aa17.1■□□□□ 0.33
HOXB3-205ENST00000470495 HABP4Q5JVS0 413 aaKnown RBP17.1■□□□□ 0.33
HOXB3-205ENST00000470495 SCUBE1Q8IWY4 988 aa17.1■□□□□ 0.33
HOXB3-205ENST00000470495 CFAP61Q8NHU2 1237 aa17.1■□□□□ 0.33
HOXB3-205ENST00000470495 ATP2A3Q93084 1043 aa17.1■□□□□ 0.33
HOXB3-205ENST00000470495 TGS1Q96RS0 853 aaKnown RBP17.1■□□□□ 0.33
HOXB3-205ENST00000470495 CFAP73A6NFT4 308 aa17.1■□□□□ 0.33
HOXB3-205ENST00000470495 GLTPD2A6NH11 291 aa17.1■□□□□ 0.33
HOXB3-205ENST00000470495 TIMM44O43615 452 aa17.1■□□□□ 0.33
HOXB3-205ENST00000470495 B4GALT4O60513 344 aa17.1■□□□□ 0.33
HOXB3-205ENST00000470495 DRG2P55039 364 aaKnown RBP17.1■□□□□ 0.33
HOXB3-205ENST00000470495 TUBA3CQ13748 450 aa17.1■□□□□ 0.33
HOXB3-205ENST00000470495 FAM172AQ8WUF8 416 aa17.1■□□□□ 0.33
HOXB3-205ENST00000470495 ITGA11Q9UKX5 1188 aa17.1■□□□□ 0.33
HOXB3-205ENST00000470495 TMEM247A6NEH6 219 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms