RNA–Protein interactions for RNA: ENST00000470474.1

ATG7-222, Transcript of autophagy related 7, human

TSL 1 (best)

Gene ATG7, Length 534 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATG7-222	ENST00000470474	C10orf120	Q5SQS8	335 aa		18.83	■□□□□ 0.6
ATG7-222	ENST00000470474	ZNF658	Q5TYW1	1059 aa	Predicted RBP	18.83	■□□□□ 0.6
ATG7-222	ENST00000470474	RNF43	Q68DV7	783 aa		18.83	■□□□□ 0.6
ATG7-222	ENST00000470474	GRAMD4	Q6IC98	578 aa		18.83	■□□□□ 0.6
ATG7-222	ENST00000470474		Q6ZNB5	142 aa		18.83	■□□□□ 0.6
ATG7-222	ENST00000470474	NUDT18	Q6ZVK8	323 aa		18.83	■□□□□ 0.6
ATG7-222	ENST00000470474	HMGB4	Q8WW32	186 aa		18.83	■□□□□ 0.6
ATG7-222	ENST00000470474	RLN3	Q8WXF3	142 aa		18.83	■□□□□ 0.6
ATG7-222	ENST00000470474	TMEM176A	Q96HP8	235 aa		18.83	■□□□□ 0.6
ATG7-222	ENST00000470474	SPACA7	Q96KW9	195 aa		18.83	■□□□□ 0.6
ATG7-222	ENST00000470474	HEXIM2	Q96MH2	286 aa	Known RBP	18.83	■□□□□ 0.6
ATG7-222	ENST00000470474	GSDMA	Q96QA5	445 aa		18.83	■□□□□ 0.6
ATG7-222	ENST00000470474	BBS2	Q9BXC9	721 aa		18.83	■□□□□ 0.6
ATG7-222	ENST00000470474	DNAJC17	Q9NVM6	304 aa	Known RBP	18.83	■□□□□ 0.6
ATG7-222	ENST00000470474	CLIC5	Q9NZA1	410 aa		18.83	■□□□□ 0.6
ATG7-222	ENST00000470474	BCCIP	Q9P287	314 aa	Known RBP eCLIP	18.83	■□□□□ 0.6
ATG7-222	ENST00000470474	GTF3C3	Q9Y5Q9	886 aa		18.83	■□□□□ 0.6
ATG7-222	ENST00000470474	SLC16A3	O15427	465 aa	Known RBP	18.82	■□□□□ 0.6
ATG7-222	ENST00000470474	STC2	O76061	302 aa		18.82	■□□□□ 0.6
ATG7-222	ENST00000470474	PLA2G4A	P47712	749 aa		18.82	■□□□□ 0.6
ATG7-222	ENST00000470474	CBWD6	Q4V339	395 aa		18.82	■□□□□ 0.6
ATG7-222	ENST00000470474	CBWD3	Q5JTY5	395 aa		18.82	■□□□□ 0.6
ATG7-222	ENST00000470474	CBWD5	Q5RIA9	395 aa		18.82	■□□□□ 0.6
ATG7-222	ENST00000470474	TPGS1	Q6ZTW0	290 aa		18.82	■□□□□ 0.6
ATG7-222	ENST00000470474	CYP2U1	Q7Z449	544 aa		18.82	■□□□□ 0.6
ATG7-222	ENST00000470474	TADA2B	Q86TJ2	420 aa		18.82	■□□□□ 0.6
ATG7-222	ENST00000470474	MIB1	Q86YT6	1006 aa		18.82	■□□□□ 0.6
ATG7-222	ENST00000470474	ENGASE	Q8NFI3	743 aa		18.82	■□□□□ 0.6
ATG7-222	ENST00000470474	SPATA20	Q8TB22	786 aa		18.82	■□□□□ 0.6
ATG7-222	ENST00000470474	XPO6	Q96QU8	1125 aa	Known RBP	18.82	■□□□□ 0.6
ATG7-222	ENST00000470474	WDR35	Q9P2L0	1181 aa		18.82	■□□□□ 0.6
ATG7-222	ENST00000470474	COQ4	Q9Y3A0	265 aa		18.82	■□□□□ 0.6
ATG7-222	ENST00000470474	MYO18A	Q92614	2054 aa	Known RBP	18.81	■□□□□ 0.6
ATG7-222	ENST00000470474	HOXB2	P14652	356 aa		18.81	■□□□□ 0.6
ATG7-222	ENST00000470474	DHPS	P49366	369 aa	Predicted RBP	18.81	■□□□□ 0.6
ATG7-222	ENST00000470474	PMS1	P54277	932 aa	Known RBP	18.81	■□□□□ 0.6
ATG7-222	ENST00000470474	MAP7D1	Q3KQU3	841 aa		18.81	■□□□□ 0.6
ATG7-222	ENST00000470474	DCAF17	Q5H9S7	520 aa	Predicted RBP	18.81	■□□□□ 0.6
ATG7-222	ENST00000470474	RAB41	Q5JT25	222 aa		18.81	■□□□□ 0.6
ATG7-222	ENST00000470474	EGFLAM	Q63HQ2	1017 aa		18.81	■□□□□ 0.6
ATG7-222	ENST00000470474	ARHGAP17	Q68EM7	881 aa		18.81	■□□□□ 0.6
ATG7-222	ENST00000470474	FRMD1	Q8N878	549 aa		18.81	■□□□□ 0.6
ATG7-222	ENST00000470474	TATDN2	Q93075	761 aa		18.81	■□□□□ 0.6
ATG7-222	ENST00000470474	CDK5RAP1	Q96SZ6	601 aa	Known RBP	18.81	■□□□□ 0.6
ATG7-222	ENST00000470474	TSG101	Q99816	390 aa		18.81	■□□□□ 0.6
ATG7-222	ENST00000470474	LSM14B	Q9BX40	385 aa	Known RBP	18.81	■□□□□ 0.6
ATG7-222	ENST00000470474	UBXN6	Q9BZV1	441 aa		18.81	■□□□□ 0.6
ATG7-222	ENST00000470474	MBD1	Q9UIS9	605 aa	Predicted RBP	18.81	■□□□□ 0.6
ATG7-222	ENST00000470474	CNOT1	A5YKK6	2376 aa	Known RBP	18.81	■□□□□ 0.6
ATG7-222	ENST00000470474	ACACB	O00763	2458 aa		18.8	■□□□□ 0.6
ATG7-222	ENST00000470474	EPG5	Q9HCE0	2579 aa		18.8	■□□□□ 0.6
ATG7-222	ENST00000470474		A0A1W2PQF6	199 aa		18.8	■□□□□ 0.6
ATG7-222	ENST00000470474	PATE3	B3GLJ2	98 aa		18.8	■□□□□ 0.6
ATG7-222	ENST00000470474	PRRT4	C9JH25	899 aa		18.8	■□□□□ 0.6
ATG7-222	ENST00000470474	RALA	P11233	206 aa		18.8	■□□□□ 0.6
ATG7-222	ENST00000470474	KCNA4	P22459	653 aa		18.8	■□□□□ 0.6
ATG7-222	ENST00000470474	NTSR1	P30989	418 aa		18.8	■□□□□ 0.6
ATG7-222	ENST00000470474	FKBP3	Q00688	224 aa	Known RBP	18.8	■□□□□ 0.6
ATG7-222	ENST00000470474	TCERG1L	Q5VWI1	586 aa		18.8	■□□□□ 0.6
ATG7-222	ENST00000470474	ANKRD40	Q6AI12	368 aa		18.8	■□□□□ 0.6
ATG7-222	ENST00000470474	TOGARAM2	Q6ZUX3	1019 aa		18.8	■□□□□ 0.6
ATG7-222	ENST00000470474	LPCAT2	Q7L5N7	544 aa		18.8	■□□□□ 0.6
ATG7-222	ENST00000470474	PIGZ	Q86VD9	579 aa		18.8	■□□□□ 0.6
ATG7-222	ENST00000470474	ANKRD52	Q8NB46	1076 aa		18.8	■□□□□ 0.6
ATG7-222	ENST00000470474	P2RY11	Q96G91	374 aa		18.8	■□□□□ 0.6
ATG7-222	ENST00000470474	CD248	Q9HCU0	757 aa		18.8	■□□□□ 0.6
ATG7-222	ENST00000470474	CIZ1	Q9ULV3	898 aa	Predicted RBP	18.8	■□□□□ 0.6
ATG7-222	ENST00000470474	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		18.79	■□□□□ 0.6
ATG7-222	ENST00000470474	TRIM49B	A6NDI0	452 aa		18.79	■□□□□ 0.6
ATG7-222	ENST00000470474	KHNYN	O15037	678 aa	Known RBP	18.79	■□□□□ 0.6
ATG7-222	ENST00000470474	KLKB1	P03952	638 aa		18.79	■□□□□ 0.6
ATG7-222	ENST00000470474	GABRG2	P18507	467 aa		18.79	■□□□□ 0.6
ATG7-222	ENST00000470474	DGKG	P49619	791 aa		18.79	■□□□□ 0.6
ATG7-222	ENST00000470474	LRRC63	Q05C16	580 aa		18.79	■□□□□ 0.6
ATG7-222	ENST00000470474	BYSL	Q13895	437 aa	Known RBP	18.79	■□□□□ 0.6
ATG7-222	ENST00000470474	TMEFF1	Q8IYR6	380 aa		18.79	■□□□□ 0.6
ATG7-222	ENST00000470474	PGBD3	Q8N328	593 aa		18.79	■□□□□ 0.6
ATG7-222	ENST00000470474	ERCC4	Q92889	916 aa	Predicted RBP	18.79	■□□□□ 0.6
ATG7-222	ENST00000470474	SLC35C1	Q96A29	364 aa		18.79	■□□□□ 0.6
ATG7-222	ENST00000470474	ACOX2	Q99424	681 aa		18.79	■□□□□ 0.6
ATG7-222	ENST00000470474	RASAL2	Q9UJF2	1139 aa		18.79	■□□□□ 0.6
ATG7-222	ENST00000470474	TPR	P12270	2363 aa	Known RBP	18.78	■□□□□ 0.6
ATG7-222	ENST00000470474	KMT2B	Q9UMN6	2715 aa	Predicted RBP	18.78	■□□□□ 0.6
ATG7-222	ENST00000470474	GOLGA6L4	A6NEF3	574 aa		18.78	■□□□□ 0.6
ATG7-222	ENST00000470474	SMC2	O95347	1197 aa		18.78	■□□□□ 0.6
ATG7-222	ENST00000470474	PENK	P01210	267 aa	Predicted RBP	18.78	■□□□□ 0.6
ATG7-222	ENST00000470474	CISD3	P0C7P0	127 aa		18.78	■□□□□ 0.6
ATG7-222	ENST00000470474	WAS	P42768	502 aa		18.78	■□□□□ 0.6
ATG7-222	ENST00000470474	PTGER3	P43115	390 aa		18.78	■□□□□ 0.6
ATG7-222	ENST00000470474	COG7	P83436	770 aa		18.78	■□□□□ 0.6
ATG7-222	ENST00000470474	EFEMP1	Q12805	493 aa		18.78	■□□□□ 0.6
ATG7-222	ENST00000470474	CUL2	Q13617	745 aa		18.78	■□□□□ 0.6
ATG7-222	ENST00000470474	SPDYC	Q5MJ68	293 aa		18.78	■□□□□ 0.6
ATG7-222	ENST00000470474	CHPF	Q8IZ52	775 aa		18.78	■□□□□ 0.6
ATG7-222	ENST00000470474	ARHGAP18	Q8N392	663 aa		18.78	■□□□□ 0.6
ATG7-222	ENST00000470474	PIGK	Q92643	395 aa		18.78	■□□□□ 0.6
ATG7-222	ENST00000470474	BHMT	Q93088	406 aa		18.78	■□□□□ 0.6
ATG7-222	ENST00000470474	SMARCE1	Q969G3	411 aa		18.78	■□□□□ 0.6
ATG7-222	ENST00000470474	GABRG3	Q99928	467 aa		18.78	■□□□□ 0.6
ATG7-222	ENST00000470474	PLK2	Q9NYY3	685 aa		18.78	■□□□□ 0.6

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