RNA–Protein interactions for RNA: ENST00000469358.5

VARS2-205, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 5

Gene VARS2, Length 3,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-205ENST00000469358 RSAD1Q9HA92 442 aa12.53□□□□□ -0.4
VARS2-205ENST00000469358 SCOCQ9UIL1 159 aa12.53□□□□□ -0.4
VARS2-205ENST00000469358 COL11A1P12107 1806 aaPredicted RBP12.53□□□□□ -0.4
VARS2-205ENST00000469358 ARHGAP42A6NI28 874 aa12.53□□□□□ -0.4
VARS2-205ENST00000469358 GPR25O00155 361 aa12.53□□□□□ -0.4
VARS2-205ENST00000469358 KRT37O76014 449 aa12.53□□□□□ -0.4
VARS2-205ENST00000469358 ARIH2O95376 493 aa12.53□□□□□ -0.4
VARS2-205ENST00000469358 TGDSO95455 350 aa12.53□□□□□ -0.4
VARS2-205ENST00000469358 PAPOLAP51003 745 aaKnown RBP12.53□□□□□ -0.4
VARS2-205ENST00000469358 BCAR1P56945 870 aa12.53□□□□□ -0.4
VARS2-205ENST00000469358 PDE1BQ01064 536 aa12.53□□□□□ -0.4
VARS2-205ENST00000469358 BIRC2Q13490 618 aa12.53□□□□□ -0.4
VARS2-205ENST00000469358 TEX44Q53QW1 395 aa12.53□□□□□ -0.4
VARS2-205ENST00000469358 JADE1Q6IE81 842 aa12.53□□□□□ -0.4
VARS2-205ENST00000469358 CES3Q6UWW8 571 aa12.53□□□□□ -0.4
VARS2-205ENST00000469358 ZPBP2Q6X784 338 aa12.53□□□□□ -0.4
VARS2-205ENST00000469358 RAPH1Q70E73 1250 aa12.53□□□□□ -0.4
VARS2-205ENST00000469358 PPFIBP2Q8ND30 876 aa12.53□□□□□ -0.4
VARS2-205ENST00000469358 ANKRD27Q96NW4 1050 aa12.53□□□□□ -0.4
VARS2-205ENST00000469358 RNF157Q96PX1 679 aa12.53□□□□□ -0.4
VARS2-205ENST00000469358 TUBGCP5Q96RT8 1024 aa12.53□□□□□ -0.4
VARS2-205ENST00000469358 ZNF184Q99676 751 aaPredicted RBP12.53□□□□□ -0.4
VARS2-205ENST00000469358 NIFKQ9BYG3 293 aaKnown RBP12.53□□□□□ -0.4
VARS2-205ENST00000469358 MIS12Q9H081 205 aa12.53□□□□□ -0.4
VARS2-205ENST00000469358 ETNK2Q9NVF9 386 aa12.53□□□□□ -0.4
VARS2-205ENST00000469358 PLA2G4CQ9UP65 541 aa12.53□□□□□ -0.4
VARS2-205ENST00000469358 LOC100653049A0A140TA62 436 aa12.53□□□□□ -0.4
VARS2-205ENST00000469358 SPDYE16A6NNV3 312 aaPredicted RBP12.53□□□□□ -0.4
VARS2-205ENST00000469358 LACTBL1A8MY62 500 aa12.53□□□□□ -0.4
VARS2-205ENST00000469358 PRPSAP2O60256 369 aa12.53□□□□□ -0.4
VARS2-205ENST00000469358 KRT34O76011 436 aa12.53□□□□□ -0.4
VARS2-205ENST00000469358 PHKA2P46019 1235 aa12.53□□□□□ -0.4
VARS2-205ENST00000469358 GTF2A2P52657 109 aa12.53□□□□□ -0.4
VARS2-205ENST00000469358 OLIG2Q13516 323 aa12.53□□□□□ -0.4
VARS2-205ENST00000469358 SPDYAQ5MJ70 313 aa12.53□□□□□ -0.4
VARS2-205ENST00000469358 ATF7IP2Q5U623 682 aa12.53□□□□□ -0.4
VARS2-205ENST00000469358 RTKN2Q8IZC4 609 aa12.53□□□□□ -0.4
VARS2-205ENST00000469358 AGR3Q8TD06 166 aa12.53□□□□□ -0.4
VARS2-205ENST00000469358 COPS5Q92905 334 aa12.53□□□□□ -0.4
VARS2-205ENST00000469358 ANKRD36BP1Q96IX9 119 aa12.53□□□□□ -0.4
VARS2-205ENST00000469358 CPB2Q96IY4 423 aa12.53□□□□□ -0.4
VARS2-205ENST00000469358 PICK1Q9NRD5 415 aa12.53□□□□□ -0.4
VARS2-205ENST00000469358 FAM49BQ9NUQ9 324 aa12.53□□□□□ -0.4
VARS2-205ENST00000469358 EFR3BQ9Y2G0 817 aa12.53□□□□□ -0.4
VARS2-205ENST00000469358 HBS1LQ9Y450 684 aaKnown RBP12.53□□□□□ -0.4
VARS2-205ENST00000469358 ASB3Q9Y575 518 aa12.53□□□□□ -0.4
VARS2-205ENST00000469358 CEP350Q5VT06 3117 aa12.53□□□□□ -0.4
VARS2-205ENST00000469358 MYO18AQ92614 2054 aaKnown RBP12.53□□□□□ -0.4
VARS2-205ENST00000469358 MAFO75444 373 aaPredicted RBP12.52□□□□□ -0.4
VARS2-205ENST00000469358 GPD1P21695 349 aa12.52□□□□□ -0.4
VARS2-205ENST00000469358 SLC10A2Q12908 348 aaPredicted RBP12.52□□□□□ -0.4
VARS2-205ENST00000469358 PPM1JQ5JR12 505 aa12.52□□□□□ -0.4
VARS2-205ENST00000469358 LPCAT4Q643R3 524 aa12.52□□□□□ -0.4
VARS2-205ENST00000469358 PPP1R2P3Q6NXS1 205 aa12.52□□□□□ -0.4
VARS2-205ENST00000469358 CASC4Q6P4E1 433 aa12.52□□□□□ -0.4
VARS2-205ENST00000469358 RNF111Q6ZNA4 994 aa12.52□□□□□ -0.4
VARS2-205ENST00000469358 MTMR14Q8NCE2 650 aa12.52□□□□□ -0.4
VARS2-205ENST00000469358 PPP1R14CQ8TAE6 165 aa12.52□□□□□ -0.4
VARS2-205ENST00000469358 CNKSR2Q8WXI2 1034 aa12.52□□□□□ -0.4
VARS2-205ENST00000469358 ATXN7L3BQ96GX2 97 aa12.52□□□□□ -0.4
VARS2-205ENST00000469358 NRBP2Q9NSY0 501 aa12.52□□□□□ -0.4
VARS2-205ENST00000469358 ZNF358Q9NW07 568 aa12.52□□□□□ -0.4
VARS2-205ENST00000469358 MAGED2Q9UNF1 606 aaPredicted RBP12.52□□□□□ -0.4
VARS2-205ENST00000469358 HNRNPCL1O60812 293 aaKnown RBP12.52□□□□□ -0.41
VARS2-205ENST00000469358 STK10O94804 968 aaKnown RBP12.52□□□□□ -0.41
VARS2-205ENST00000469358 NPTXRO95502 500 aa12.52□□□□□ -0.41
VARS2-205ENST00000469358 PGK2P07205 417 aa12.52□□□□□ -0.41
VARS2-205ENST00000469358 ETS2P15036 469 aa12.52□□□□□ -0.41
VARS2-205ENST00000469358 ABCG1P45844 678 aa12.52□□□□□ -0.41
VARS2-205ENST00000469358 ZNF534Q76KX8 674 aa12.52□□□□□ -0.41
VARS2-205ENST00000469358 TMPRSS6Q8IU80 811 aa12.52□□□□□ -0.41
VARS2-205ENST00000469358 MICALL2Q8IY33 904 aa12.52□□□□□ -0.41
VARS2-205ENST00000469358 HACE1Q8IYU2 909 aa12.52□□□□□ -0.41
VARS2-205ENST00000469358 MTBPQ96DY7 904 aa12.52□□□□□ -0.41
VARS2-205ENST00000469358 TMEM176AQ96HP8 235 aa12.52□□□□□ -0.41
VARS2-205ENST00000469358 CDT1Q9H211 546 aa12.52□□□□□ -0.41
VARS2-205ENST00000469358 SPECC1L-ADORA2AF8WAN1 911 aa12.52□□□□□ -0.41
VARS2-205ENST00000469358 CLGNO14967 610 aa12.52□□□□□ -0.41
VARS2-205ENST00000469358 STIP1P31948 543 aaKnown RBP12.52□□□□□ -0.41
VARS2-205ENST00000469358 ARRB2P32121 409 aa12.52□□□□□ -0.41
VARS2-205ENST00000469358 ZNF143P52747 638 aaPredicted RBP12.52□□□□□ -0.41
VARS2-205ENST00000469358 LBRQ14739 615 aaKnown RBP12.52□□□□□ -0.41
VARS2-205ENST00000469358 CCDC14Q49A88 953 aa12.52□□□□□ -0.41
VARS2-205ENST00000469358 CRLF3Q8IUI8 442 aa12.52□□□□□ -0.41
VARS2-205ENST00000469358 CLEC4CQ8WTT0 213 aa12.52□□□□□ -0.41
VARS2-205ENST00000469358 GATA6Q92908 595 aa12.52□□□□□ -0.41
VARS2-205ENST00000469358 MCRS1Q96EZ8 462 aa12.52□□□□□ -0.41
VARS2-205ENST00000469358 CCDC106Q9BWC9 280 aa12.52□□□□□ -0.41
VARS2-205ENST00000469358 LHX5Q9H2C1 402 aa12.52□□□□□ -0.41
VARS2-205ENST00000469358 EBF3Q9H4W6 596 aa12.52□□□□□ -0.41
VARS2-205ENST00000469358 PNPOQ9NVS9 261 aa12.52□□□□□ -0.41
VARS2-205ENST00000469358 ASNSD1Q9NWL6 643 aa12.52□□□□□ -0.41
VARS2-205ENST00000469358 KCNK4Q9NYG8 393 aa12.52□□□□□ -0.41
VARS2-205ENST00000469358 DNAJC16Q9Y2G8 782 aa12.52□□□□□ -0.41
VARS2-205ENST00000469358 PSAT1Q9Y617 370 aa12.52□□□□□ -0.41
VARS2-205ENST00000469358 C2CD4BA6NLJ0 364 aa12.51□□□□□ -0.41
VARS2-205ENST00000469358 ZBTB42B2RXF5 422 aa12.51□□□□□ -0.41
VARS2-205ENST00000469358 APOEP02649 317 aa12.51□□□□□ -0.41
VARS2-205ENST00000469358 FESP07332 822 aa12.51□□□□□ -0.41
VARS2-205ENST00000469358 NDST1P52848 882 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms