RNA–Protein interactions for RNA: ENST00000469087.1

RUNX1-213, Transcript of runt related transcription factor 1, humanhuman

TSL 1 (best)

Gene RUNX1, Length 1,790 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-213ENST00000469087 LLGL1Q15334 1064 aa13.38□□□□□ -0.27
RUNX1-213ENST00000469087 PDE12Q6L8Q7 609 aaKnown RBP13.38□□□□□ -0.27
RUNX1-213ENST00000469087 ANKS1BQ7Z6G8 1248 aa13.38□□□□□ -0.27
RUNX1-213ENST00000469087 LRRN4CLQ8ND94 238 aa13.38□□□□□ -0.27
RUNX1-213ENST00000469087 CMASQ8NFW8 434 aaPredicted RBP13.38□□□□□ -0.27
RUNX1-213ENST00000469087 DQX1Q8TE96 717 aaKnown RBP13.38□□□□□ -0.27
RUNX1-213ENST00000469087 RAPGEF5Q92565 580 aa13.38□□□□□ -0.27
RUNX1-213ENST00000469087 RNF25Q96BH1 459 aaPredicted RBP13.38□□□□□ -0.27
RUNX1-213ENST00000469087 PGAP3Q96FM1 320 aaPredicted RBP13.38□□□□□ -0.27
RUNX1-213ENST00000469087 PRO3102Q9H379 93 aa13.38□□□□□ -0.27
RUNX1-213ENST00000469087 TLR8Q9NR97 1041 aaKnown RBP13.38□□□□□ -0.27
RUNX1-213ENST00000469087 COX16Q9P0S2 106 aa13.38□□□□□ -0.27
RUNX1-213ENST00000469087 FBXW11Q9UKB1 542 aa13.38□□□□□ -0.27
RUNX1-213ENST00000469087 CDH23Q9H251 3354 aa13.38□□□□□ -0.27
RUNX1-213ENST00000469087 PI4K2BG5E9Z4 385 aa13.37□□□□□ -0.27
RUNX1-213ENST00000469087 RFXAPO00287 272 aa13.37□□□□□ -0.27
RUNX1-213ENST00000469087 PRPSAP2O60256 369 aa13.37□□□□□ -0.27
RUNX1-213ENST00000469087 CLASP2O75122 1294 aaKnown RBP13.37□□□□□ -0.27
RUNX1-213ENST00000469087 GLUD1P00367 558 aa13.37□□□□□ -0.27
RUNX1-213ENST00000469087 KRT7P08729 469 aa13.37□□□□□ -0.27
RUNX1-213ENST00000469087 EPHB3P54753 998 aa13.37□□□□□ -0.27
RUNX1-213ENST00000469087 DEUP1Q05D60 604 aa13.37□□□□□ -0.27
RUNX1-213ENST00000469087 EIF4EBP2Q13542 120 aaPredicted RBP13.37□□□□□ -0.27
RUNX1-213ENST00000469087 BOLA3Q53S33 107 aa13.37□□□□□ -0.27
RUNX1-213ENST00000469087 FAM131BQ86XD5 332 aa13.37□□□□□ -0.27
RUNX1-213ENST00000469087 ARHGAP18Q8N392 663 aa13.37□□□□□ -0.27
RUNX1-213ENST00000469087 EXD1Q8NHP7 514 aa13.37□□□□□ -0.27
RUNX1-213ENST00000469087 ACTRT1Q8TDG2 376 aa13.37□□□□□ -0.27
RUNX1-213ENST00000469087 CASP10Q92851 521 aa13.37□□□□□ -0.27
RUNX1-213ENST00000469087 PSMG2Q969U7 264 aa13.37□□□□□ -0.27
RUNX1-213ENST00000469087 SLITRK1Q96PX8 696 aa13.37□□□□□ -0.27
RUNX1-213ENST00000469087 NCAPGQ9BPX3 1015 aa13.37□□□□□ -0.27
RUNX1-213ENST00000469087 TRIM62Q9BVG3 475 aa13.37□□□□□ -0.27
RUNX1-213ENST00000469087 MAGEB5Q9BZ81 275 aa13.37□□□□□ -0.27
RUNX1-213ENST00000469087 WDR6Q9NNW5 1121 aaKnown RBP13.37□□□□□ -0.27
RUNX1-213ENST00000469087 RRN3Q9NYV6 651 aa13.37□□□□□ -0.27
RUNX1-213ENST00000469087 CLIC5Q9NZA1 410 aa13.37□□□□□ -0.27
RUNX1-213ENST00000469087 RNF14Q9UBS8 474 aa13.37□□□□□ -0.27
RUNX1-213ENST00000469087 SFMBT1Q9UHJ3 866 aa13.37□□□□□ -0.27
RUNX1-213ENST00000469087 C3orf70A6NLC5 250 aaPredicted RBP13.37□□□□□ -0.27
RUNX1-213ENST00000469087 TBX18O95935 607 aa13.37□□□□□ -0.27
RUNX1-213ENST00000469087 IGLV3-25P01717 112 aa13.37□□□□□ -0.27
RUNX1-213ENST00000469087 C8AP07357 584 aa13.37□□□□□ -0.27
RUNX1-213ENST00000469087 RARGP13631 454 aa13.37□□□□□ -0.27
RUNX1-213ENST00000469087 RDXP35241 583 aaKnown RBP13.37□□□□□ -0.27
RUNX1-213ENST00000469087 PAFAH1B1P43034 410 aa13.37□□□□□ -0.27
RUNX1-213ENST00000469087 PSEN1P49768 467 aa13.37□□□□□ -0.27
RUNX1-213ENST00000469087 VEPH1Q14D04 833 aa13.37□□□□□ -0.27
RUNX1-213ENST00000469087 ZFYVE27Q5T4F4 411 aa13.37□□□□□ -0.27
RUNX1-213ENST00000469087 ERMARDQ5T6L9 678 aa13.37□□□□□ -0.27
RUNX1-213ENST00000469087 CHRDL2Q6WN34 429 aa13.37□□□□□ -0.27
RUNX1-213ENST00000469087 CCDC149Q6ZUS6 474 aa13.37□□□□□ -0.27
RUNX1-213ENST00000469087 ADGRD2Q7Z7M1 963 aa13.37□□□□□ -0.27
RUNX1-213ENST00000469087 RBM23Q86U06 439 aaKnown RBP13.37□□□□□ -0.27
RUNX1-213ENST00000469087 TAC4Q86UU9 113 aa13.37□□□□□ -0.27
RUNX1-213ENST00000469087 RCOR2Q8IZ40 523 aa13.37□□□□□ -0.27
RUNX1-213ENST00000469087 CCDC185Q8N715 623 aa13.37□□□□□ -0.27
RUNX1-213ENST00000469087 GDPD5Q8WTR4 605 aa13.37□□□□□ -0.27
RUNX1-213ENST00000469087 HSPH1Q92598 858 aa13.37□□□□□ -0.27
RUNX1-213ENST00000469087 TRMT2BQ96GJ1 504 aaKnown RBP13.37□□□□□ -0.27
RUNX1-213ENST00000469087 TMPRSS4Q9NRS4 437 aa13.37□□□□□ -0.27
RUNX1-213ENST00000469087 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.37□□□□□ -0.27
RUNX1-213ENST00000469087 DDIT4Q9NX09 232 aa13.37□□□□□ -0.27
RUNX1-213ENST00000469087 DDX56Q9NY93 547 aaKnown RBP13.37□□□□□ -0.27
RUNX1-213ENST00000469087 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.37□□□□□ -0.27
RUNX1-213ENST00000469087 TTC7AQ9ULT0 858 aaPredicted RBP13.37□□□□□ -0.27
RUNX1-213ENST00000469087 ZNF840PA6NDX5 716 aa13.36□□□□□ -0.27
RUNX1-213ENST00000469087 I6L893 689 aaPredicted RBP13.36□□□□□ -0.27
RUNX1-213ENST00000469087 F9P00740 461 aa13.36□□□□□ -0.27
RUNX1-213ENST00000469087 FGGP02679 453 aa13.36□□□□□ -0.27
RUNX1-213ENST00000469087 CD48P09326 243 aa13.36□□□□□ -0.27
RUNX1-213ENST00000469087 EPCAMP16422 314 aa13.36□□□□□ -0.27
RUNX1-213ENST00000469087 KDELR1P24390 212 aa13.36□□□□□ -0.27
RUNX1-213ENST00000469087 TAF12Q16514 161 aa13.36□□□□□ -0.27
RUNX1-213ENST00000469087 CA9Q16790 459 aa13.36□□□□□ -0.27
RUNX1-213ENST00000469087 ZC3H12AQ5D1E8 599 aaKnown RBP13.36□□□□□ -0.27
RUNX1-213ENST00000469087 CCDC181Q5TID7 509 aa13.36□□□□□ -0.27
RUNX1-213ENST00000469087 SNX30Q5VWJ9 437 aa13.36□□□□□ -0.27
RUNX1-213ENST00000469087 MFSD7Q6UXD7 560 aa13.36□□□□□ -0.27
RUNX1-213ENST00000469087 RNF139Q8WU17 664 aa13.36□□□□□ -0.27
RUNX1-213ENST00000469087 SLC22A17Q8WUG5 538 aa13.36□□□□□ -0.27
RUNX1-213ENST00000469087 ZNF512Q96ME7 567 aaPredicted RBP13.36□□□□□ -0.27
RUNX1-213ENST00000469087 HERPUD2Q9BSE4 406 aa13.36□□□□□ -0.27
RUNX1-213ENST00000469087 SNRNP25Q9BV90 132 aaKnown RBP13.36□□□□□ -0.27
RUNX1-213ENST00000469087 ANLNQ9NQW6 1124 aa13.36□□□□□ -0.27
RUNX1-213ENST00000469087 GPATCH2LQ9NWQ4 482 aa13.36□□□□□ -0.27
RUNX1-213ENST00000469087 NR2E1Q9Y466 385 aa13.36□□□□□ -0.27
RUNX1-213ENST00000469087 ATG2AQ2TAZ0 1938 aa13.35□□□□□ -0.27
RUNX1-213ENST00000469087 TCRBV7S2A1N4TA0A589 114 aa13.35□□□□□ -0.27
RUNX1-213ENST00000469087 LRRD1A4D1F6 860 aa13.35□□□□□ -0.27
RUNX1-213ENST00000469087 SLU7O95391 586 aaKnown RBP13.35□□□□□ -0.27
RUNX1-213ENST00000469087 C1RP00736 705 aa13.35□□□□□ -0.27
RUNX1-213ENST00000469087 LRG1P02750 347 aa13.35□□□□□ -0.27
RUNX1-213ENST00000469087 KRT1P04264 644 aa13.35□□□□□ -0.27
RUNX1-213ENST00000469087 CXCR3P49682 368 aa13.35□□□□□ -0.27
RUNX1-213ENST00000469087 ARSEP51690 589 aa13.35□□□□□ -0.27
RUNX1-213ENST00000469087 SMAD3P84022 425 aaKnown RBP13.35□□□□□ -0.27
RUNX1-213ENST00000469087 PLD1Q13393 1074 aa13.35□□□□□ -0.27
RUNX1-213ENST00000469087 SEL1L2Q5TEA6 688 aa13.35□□□□□ -0.27
RUNX1-213ENST00000469087 RSRC2Q7L4I2 434 aaKnown RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms