RNA–Protein interactions for RNA: ENST00000468385.1

PTPN7-207, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-207ENST00000468385 CAMK1GQ96NX5 476 aa13.82□□□□□ -0.2
PTPN7-207ENST00000468385 FBXO44Q9H4M3 255 aa13.82□□□□□ -0.2
PTPN7-207ENST00000468385 CYLDQ9NQC7 956 aa13.82□□□□□ -0.2
PTPN7-207ENST00000468385 TLR8Q9NR97 1041 aaKnown RBP13.82□□□□□ -0.2
PTPN7-207ENST00000468385 OSER1Q9NX31 292 aa13.82□□□□□ -0.2
PTPN7-207ENST00000468385 CACNA2D2Q9NY47 1150 aa13.82□□□□□ -0.2
PTPN7-207ENST00000468385 WDR35Q9P2L0 1181 aa13.82□□□□□ -0.2
PTPN7-207ENST00000468385 CGNQ9P2M7 1197 aaKnown RBP13.82□□□□□ -0.2
PTPN7-207ENST00000468385 BAHCC1Q9P281 2608 aa13.82□□□□□ -0.2
PTPN7-207ENST00000468385 FREM2Q5SZK8 3169 aa13.82□□□□□ -0.2
PTPN7-207ENST00000468385 PKD1L2Q7Z442 2459 aa13.81□□□□□ -0.2
PTPN7-207ENST00000468385 ZFYVE26Q68DK2 2539 aa13.81□□□□□ -0.2
PTPN7-207ENST00000468385 WASH3PC4AMC7 463 aa13.81□□□□□ -0.2
PTPN7-207ENST00000468385 ZBTB24O43167 697 aaPredicted RBP13.81□□□□□ -0.2
PTPN7-207ENST00000468385 SH3BP5O60239 455 aa13.81□□□□□ -0.2
PTPN7-207ENST00000468385 EXOC3O60645 756 aa13.81□□□□□ -0.2
PTPN7-207ENST00000468385 ATP5C1P36542 298 aaKnown RBP13.81□□□□□ -0.2
PTPN7-207ENST00000468385 AP3M2P53677 418 aa13.81□□□□□ -0.2
PTPN7-207ENST00000468385 MAP3K7CLP57077 242 aa13.81□□□□□ -0.2
PTPN7-207ENST00000468385 SLC14A1Q13336 389 aa13.81□□□□□ -0.2
PTPN7-207ENST00000468385 KNOP1Q1ED39 458 aaKnown RBP13.81□□□□□ -0.2
PTPN7-207ENST00000468385 PLEKHG6Q3KR16 790 aa13.81□□□□□ -0.2
PTPN7-207ENST00000468385 SHC4Q6S5L8 630 aa13.81□□□□□ -0.2
PTPN7-207ENST00000468385 GPRIN1Q7Z2K8 1008 aa13.81□□□□□ -0.2
PTPN7-207ENST00000468385 PROSER1Q86XN7 944 aa13.81□□□□□ -0.2
PTPN7-207ENST00000468385 RGL4Q8IZJ4 473 aa13.81□□□□□ -0.2
PTPN7-207ENST00000468385 CRYBG2Q8N1P7 616 aa13.81□□□□□ -0.2
PTPN7-207ENST00000468385 IQUBQ8NA54 791 aa13.81□□□□□ -0.2
PTPN7-207ENST00000468385 BLZF1Q9H2G9 400 aa13.81□□□□□ -0.2
PTPN7-207ENST00000468385 FAM124BQ9H5Z6 455 aaPredicted RBP13.81□□□□□ -0.2
PTPN7-207ENST00000468385 SLC39A2Q9NP94 309 aa13.81□□□□□ -0.2
PTPN7-207ENST00000468385 HMGXB4Q9UGU5 601 aa13.81□□□□□ -0.2
PTPN7-207ENST00000468385 ATRXP46100 2492 aa13.8□□□□□ -0.2
PTPN7-207ENST00000468385 HHLA1C9JL84 531 aa13.8□□□□□ -0.2
PTPN7-207ENST00000468385 GFRA2O00451 464 aa13.8□□□□□ -0.2
PTPN7-207ENST00000468385 NDUFS2O75306 463 aa13.8□□□□□ -0.2
PTPN7-207ENST00000468385 CLSTN1O94985 981 aa13.8□□□□□ -0.2
PTPN7-207ENST00000468385 MAOBP27338 520 aa13.8□□□□□ -0.2
PTPN7-207ENST00000468385 DGKGP49619 791 aa13.8□□□□□ -0.2
PTPN7-207ENST00000468385 NDST1P52848 882 aa13.8□□□□□ -0.2
PTPN7-207ENST00000468385 TRIP6Q15654 476 aaKnown RBP13.8□□□□□ -0.2
PTPN7-207ENST00000468385 Q6ZNB5 142 aa13.8□□□□□ -0.2
PTPN7-207ENST00000468385 C12orf29Q8N999 325 aa13.8□□□□□ -0.2
PTPN7-207ENST00000468385 ADAMTS14Q8WXS8 1223 aa13.8□□□□□ -0.2
PTPN7-207ENST00000468385 INTS4Q96HW7 963 aaKnown RBP13.8□□□□□ -0.2
PTPN7-207ENST00000468385 MAGEF1Q9HAY2 307 aa13.8□□□□□ -0.2
PTPN7-207ENST00000468385 NMUR1Q9HB89 426 aa13.8□□□□□ -0.2
PTPN7-207ENST00000468385 TFIP11Q9UBB9 837 aaKnown RBP13.8□□□□□ -0.2
PTPN7-207ENST00000468385 SUSD2Q9UGT4 822 aa13.8□□□□□ -0.2
PTPN7-207ENST00000468385 LSM7Q9UK45 103 aaKnown RBP13.8□□□□□ -0.2
PTPN7-207ENST00000468385 FBXO10Q9UK96 956 aa13.8□□□□□ -0.2
PTPN7-207ENST00000468385 SCML2Q9UQR0 700 aa13.8□□□□□ -0.2
PTPN7-207ENST00000468385 MDM4O15151 490 aa13.79□□□□□ -0.2
PTPN7-207ENST00000468385 CYP26A1O43174 497 aa13.79□□□□□ -0.2
PTPN7-207ENST00000468385 STX6O43752 255 aa13.79□□□□□ -0.2
PTPN7-207ENST00000468385 CUTAO60888 179 aa13.79□□□□□ -0.2
PTPN7-207ENST00000468385 FTH1P19P0C7X4 201 aa13.79□□□□□ -0.2
PTPN7-207ENST00000468385 CD6P30203 668 aa13.79□□□□□ -0.2
PTPN7-207ENST00000468385 DLG4P78352 724 aa13.79□□□□□ -0.2
PTPN7-207ENST00000468385 GOLGA8FQ08AF8 430 aa13.79□□□□□ -0.2
PTPN7-207ENST00000468385 GOLGA8DPQ0D2H9 430 aa13.79□□□□□ -0.2
PTPN7-207ENST00000468385 SCAPQ12770 1279 aa13.79□□□□□ -0.2
PTPN7-207ENST00000468385 GRIK2Q13002 908 aa13.79□□□□□ -0.2
PTPN7-207ENST00000468385 CUL4BQ13620 913 aa13.79□□□□□ -0.2
PTPN7-207ENST00000468385 ACAP1Q15027 740 aa13.79□□□□□ -0.2
PTPN7-207ENST00000468385 SYCP2LQ5T4T6 812 aa13.79□□□□□ -0.2
PTPN7-207ENST00000468385 KLHDC10Q6PID8 442 aa13.79□□□□□ -0.2
PTPN7-207ENST00000468385 KIAA1324Q6UXG2 1013 aaKnown RBP13.79□□□□□ -0.2
PTPN7-207ENST00000468385 CLEC20AQ6ZU45 233 aa13.79□□□□□ -0.2
PTPN7-207ENST00000468385 METTL3Q86U44 580 aaKnown RBP13.79□□□□□ -0.2
PTPN7-207ENST00000468385 UNC93AQ86WB7 457 aa13.79□□□□□ -0.2
PTPN7-207ENST00000468385 NAXDQ8IW45 347 aa13.79□□□□□ -0.2
PTPN7-207ENST00000468385 FOXJ1Q92949 421 aa13.79□□□□□ -0.2
PTPN7-207ENST00000468385 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.79□□□□□ -0.2
PTPN7-207ENST00000468385 FAM49BQ9NUQ9 324 aa13.79□□□□□ -0.2
PTPN7-207ENST00000468385 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.79□□□□□ -0.2
PTPN7-207ENST00000468385 DMAC2Q9NW81 257 aa13.79□□□□□ -0.2
PTPN7-207ENST00000468385 WSB2Q9NYS7 404 aaPredicted RBP13.79□□□□□ -0.2
PTPN7-207ENST00000468385 PLK2Q9NYY3 685 aa13.79□□□□□ -0.2
PTPN7-207ENST00000468385 NUDT5Q9UKK9 219 aa13.79□□□□□ -0.2
PTPN7-207ENST00000468385 SMG1Q96Q15 3661 aaKnown RBP13.79□□□□□ -0.2
PTPN7-207ENST00000468385 PVALEFA0A1B0GWK0 134 aa13.78□□□□□ -0.2
PTPN7-207ENST00000468385 A0A1W2PQH9 124 aa13.78□□□□□ -0.2
PTPN7-207ENST00000468385 POLR2DO15514 142 aaKnown RBP13.78□□□□□ -0.2
PTPN7-207ENST00000468385 FAM200BP0CF97 657 aa13.78□□□□□ -0.2
PTPN7-207ENST00000468385 RARGP13631 454 aa13.78□□□□□ -0.2
PTPN7-207ENST00000468385 P4HA1P13674 534 aa13.78□□□□□ -0.2
PTPN7-207ENST00000468385 GNSP15586 552 aa13.78□□□□□ -0.2
PTPN7-207ENST00000468385 ADORA2BP29275 332 aa13.78□□□□□ -0.2
PTPN7-207ENST00000468385 ASPAP45381 313 aa13.78□□□□□ -0.2
PTPN7-207ENST00000468385 PLA2G4AP47712 749 aa13.78□□□□□ -0.2
PTPN7-207ENST00000468385 SGSM1Q2NKQ1 1148 aa13.78□□□□□ -0.2
PTPN7-207ENST00000468385 ZACNQ401N2 412 aa13.78□□□□□ -0.2
PTPN7-207ENST00000468385 FUT11Q495W5 492 aa13.78□□□□□ -0.2
PTPN7-207ENST00000468385 WDR45BQ5MNZ6 344 aa13.78□□□□□ -0.2
PTPN7-207ENST00000468385 SPOPLQ6IQ16 392 aa13.78□□□□□ -0.2
PTPN7-207ENST00000468385 PNPLA1Q8N8W4 532 aa13.78□□□□□ -0.2
PTPN7-207ENST00000468385 GOLGA5Q8TBA6 731 aa13.78□□□□□ -0.2
PTPN7-207ENST00000468385 TMEM174Q8WUU8 243 aa13.78□□□□□ -0.2
PTPN7-207ENST00000468385 DNASE2BQ8WZ79 361 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms