RNA–Protein interactions for RNA: ENST00000468253.1

NPHP4-206, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-206ENST00000468253 EXOC4Q96A65 974 aa20.96■□□□□ 0.95
NPHP4-206ENST00000468253 CLDN23Q96B33 292 aa20.96■□□□□ 0.95
NPHP4-206ENST00000468253 PRRX2Q99811 253 aa20.96■□□□□ 0.95
NPHP4-206ENST00000468253 MIS12Q9H081 205 aa20.96■□□□□ 0.95
NPHP4-206ENST00000468253 LTB4R2Q9NPC1 389 aa20.96■□□□□ 0.95
NPHP4-206ENST00000468253 ASNSD1Q9NWL6 643 aa20.96■□□□□ 0.95
NPHP4-206ENST00000468253 NOCTQ9UK39 431 aaKnown RBP20.96■□□□□ 0.95
NPHP4-206ENST00000468253 LSM7Q9UK45 103 aaKnown RBP20.96■□□□□ 0.95
NPHP4-206ENST00000468253 NUDT5Q9UKK9 219 aa20.96■□□□□ 0.95
NPHP4-206ENST00000468253 HBS1LQ9Y450 684 aaKnown RBP20.96■□□□□ 0.95
NPHP4-206ENST00000468253 NUP210Q8TEM1 1887 aaPredicted RBP20.96■□□□□ 0.95
NPHP4-206ENST00000468253 OTOL1A6NHN0 477 aaPredicted RBP20.95■□□□□ 0.94
NPHP4-206ENST00000468253 E5RJQ4 531 aa20.95■□□□□ 0.94
NPHP4-206ENST00000468253 CTHP32929 405 aa20.95■□□□□ 0.94
NPHP4-206ENST00000468253 MAGEA9P43362 315 aa20.95■□□□□ 0.94
NPHP4-206ENST00000468253 GABRB2P47870 512 aa20.95■□□□□ 0.94
NPHP4-206ENST00000468253 EFEMP1Q12805 493 aa20.95■□□□□ 0.94
NPHP4-206ENST00000468253 EFHC1Q5JVL4 640 aa20.95■□□□□ 0.94
NPHP4-206ENST00000468253 IQCDQ96DY2 449 aa20.95■□□□□ 0.94
NPHP4-206ENST00000468253 CPXM1Q96SM3 734 aa20.95■□□□□ 0.94
NPHP4-206ENST00000468253 PIK3R2O00459 728 aa20.94■□□□□ 0.94
NPHP4-206ENST00000468253 TRDMT1O14717 391 aaKnown RBP20.94■□□□□ 0.94
NPHP4-206ENST00000468253 PI15O43692 258 aa20.94■□□□□ 0.94
NPHP4-206ENST00000468253 FYNP06241 537 aa20.94■□□□□ 0.94
NPHP4-206ENST00000468253 FERP16591 822 aa20.94■□□□□ 0.94
NPHP4-206ENST00000468253 GJA4P35212 333 aa20.94■□□□□ 0.94
NPHP4-206ENST00000468253 PBX1P40424 430 aa20.94■□□□□ 0.94
NPHP4-206ENST00000468253 YWHAZP63104 245 aaKnown RBP20.94■□□□□ 0.94
NPHP4-206ENST00000468253 FZD5Q13467 585 aa20.94■□□□□ 0.94
NPHP4-206ENST00000468253 TRIP4Q15650 581 aaPredicted RBP20.94■□□□□ 0.94
NPHP4-206ENST00000468253 RHBDF2Q6PJF5 856 aa20.94■□□□□ 0.94
NPHP4-206ENST00000468253 TRIM72Q6ZMU5 477 aa20.94■□□□□ 0.94
NPHP4-206ENST00000468253 MIB1Q86YT6 1006 aa20.94■□□□□ 0.94
NPHP4-206ENST00000468253 PASD1Q8IV76 773 aa20.94■□□□□ 0.94
NPHP4-206ENST00000468253 C1orf131Q8NDD1 294 aaKnown RBP20.94■□□□□ 0.94
NPHP4-206ENST00000468253 TTC16Q8NEE8 873 aa20.94■□□□□ 0.94
NPHP4-206ENST00000468253 BAP1Q92560 729 aa20.94■□□□□ 0.94
NPHP4-206ENST00000468253 ARIH1Q9Y4X5 557 aaPredicted RBP20.94■□□□□ 0.94
NPHP4-206ENST00000468253 OBSL1O75147 1896 aa20.93■□□□□ 0.94
NPHP4-206ENST00000468253 MDM4O15151 490 aa20.93■□□□□ 0.94
NPHP4-206ENST00000468253 STC2O76061 302 aa20.93■□□□□ 0.94
NPHP4-206ENST00000468253 CYP1A1P04798 512 aaPredicted RBP20.93■□□□□ 0.94
NPHP4-206ENST00000468253 TPM3P06753 285 aa20.93■□□□□ 0.94
NPHP4-206ENST00000468253 MMEP08473 750 aa20.93■□□□□ 0.94
NPHP4-206ENST00000468253 CHRNB2P17787 502 aa20.93■□□□□ 0.94
NPHP4-206ENST00000468253 CD72P21854 359 aa20.93■□□□□ 0.94
NPHP4-206ENST00000468253 RPS9P46781 194 aaKnown RBP20.93■□□□□ 0.94
NPHP4-206ENST00000468253 DHCR24Q15392 516 aa20.93■□□□□ 0.94
NPHP4-206ENST00000468253 MAMSTRQ6ZN01 415 aa20.93■□□□□ 0.94
NPHP4-206ENST00000468253 Q6ZNB5 142 aa20.93■□□□□ 0.94
NPHP4-206ENST00000468253 IRF2BP2Q7Z5L9 587 aa20.93■□□□□ 0.94
NPHP4-206ENST00000468253 ERICH1Q86X53 443 aa20.93■□□□□ 0.94
NPHP4-206ENST00000468253 TMEM105Q8N8V8 129 aa20.93■□□□□ 0.94
NPHP4-206ENST00000468253 CLEC4CQ8WTT0 213 aa20.93■□□□□ 0.94
NPHP4-206ENST00000468253 EDEM1Q92611 657 aa20.93■□□□□ 0.94
NPHP4-206ENST00000468253 WBP2Q969T9 261 aa20.93■□□□□ 0.94
NPHP4-206ENST00000468253 PLD4Q96BZ4 506 aa20.93■□□□□ 0.94
NPHP4-206ENST00000468253 C18orf8Q96DM3 657 aa20.93■□□□□ 0.94
NPHP4-206ENST00000468253 FOXQ1Q9C009 403 aa20.93■□□□□ 0.94
NPHP4-206ENST00000468253 POPDC2Q9HBU9 364 aa20.93■□□□□ 0.94
NPHP4-206ENST00000468253 AIPL1Q9NZN9 384 aa20.93■□□□□ 0.94
NPHP4-206ENST00000468253 DLGAP2Q9P1A6 1054 aa20.93■□□□□ 0.94
NPHP4-206ENST00000468253 RASAL2Q9UJF2 1139 aa20.93■□□□□ 0.94
NPHP4-206ENST00000468253 MTF2Q9Y483 593 aaPredicted RBP20.93■□□□□ 0.94
NPHP4-206ENST00000468253 PATJQ8NI35 1801 aa20.92■□□□□ 0.94
NPHP4-206ENST00000468253 SLC12A8A0AV02 714 aa20.92■□□□□ 0.94
NPHP4-206ENST00000468253 ADH1CP00326 375 aa20.92■□□□□ 0.94
NPHP4-206ENST00000468253 TARSP26639 723 aaKnown RBP20.92■□□□□ 0.94
NPHP4-206ENST00000468253 SCNN1AP37088 669 aa20.92■□□□□ 0.94
NPHP4-206ENST00000468253 SOX9P48436 509 aa20.92■□□□□ 0.94
NPHP4-206ENST00000468253 VCPP55072 806 aaKnown RBP20.92■□□□□ 0.94
NPHP4-206ENST00000468253 FMO1Q01740 532 aa20.92■□□□□ 0.94
NPHP4-206ENST00000468253 NNTQ13423 1086 aa20.92■□□□□ 0.94
NPHP4-206ENST00000468253 UBXN2BQ14CS0 331 aa20.92■□□□□ 0.94
NPHP4-206ENST00000468253 PTPN20Q4JDL3 420 aa20.92■□□□□ 0.94
NPHP4-206ENST00000468253 DGKKQ5KSL6 1271 aa20.92■□□□□ 0.94
NPHP4-206ENST00000468253 TAF3Q5VWG9 929 aa20.92■□□□□ 0.94
NPHP4-206ENST00000468253 BBS7Q8IWZ6 715 aa20.92■□□□□ 0.94
NPHP4-206ENST00000468253 CCDC105Q8IYK2 499 aa20.92■□□□□ 0.94
NPHP4-206ENST00000468253 SYNPOQ8N3V7 929 aa20.92■□□□□ 0.94
NPHP4-206ENST00000468253 MSANTD4Q8NCY6 345 aa20.92■□□□□ 0.94
NPHP4-206ENST00000468253 ZNF397Q8NF99 534 aaPredicted RBP20.92■□□□□ 0.94
NPHP4-206ENST00000468253 TTC8Q8TAM2 541 aa20.92■□□□□ 0.94
NPHP4-206ENST00000468253 IPO4Q8TEX9 1081 aaKnown RBP20.92■□□□□ 0.94
NPHP4-206ENST00000468253 TTYH3Q9C0H2 523 aa20.92■□□□□ 0.94
NPHP4-206ENST00000468253 NUCKS1Q9H1E3 243 aaKnown RBP20.92■□□□□ 0.94
NPHP4-206ENST00000468253 TMEM51Q9NW97 253 aa20.92■□□□□ 0.94
NPHP4-206ENST00000468253 A0A1W2PQJ5 194 aa20.91■□□□□ 0.94
NPHP4-206ENST00000468253 KLKB1P03952 638 aa20.91■□□□□ 0.94
NPHP4-206ENST00000468253 CHRNB1P11230 501 aa20.91■□□□□ 0.94
NPHP4-206ENST00000468253 NCAM1P13591 858 aa20.91■□□□□ 0.94
NPHP4-206ENST00000468253 CHKAP35790 457 aa20.91■□□□□ 0.94
NPHP4-206ENST00000468253 SLC6A3Q01959 620 aa20.91■□□□□ 0.94
NPHP4-206ENST00000468253 RING1Q06587 406 aa20.91■□□□□ 0.94
NPHP4-206ENST00000468253 TMEM196Q5HYL7 178 aa20.91■□□□□ 0.94
NPHP4-206ENST00000468253 TXNDC11Q6PKC3 985 aa20.91■□□□□ 0.94
NPHP4-206ENST00000468253 TOGARAM2Q6ZUX3 1019 aa20.91■□□□□ 0.94
NPHP4-206ENST00000468253 SLC20A1Q8WUM9 679 aa20.91■□□□□ 0.94
NPHP4-206ENST00000468253 AZIN2Q96A70 460 aa20.91■□□□□ 0.94
NPHP4-206ENST00000468253 FAM149B1Q96BN6 582 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms