RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 DMAP1Q9NPF5 467 aaPredicted RBP13.47□□□□□ -0.25
PDZRN3-205ENST00000466780 BIRC5O15392 142 aa13.46□□□□□ -0.25
PDZRN3-205ENST00000466780 ITM2AO43736 263 aa13.46□□□□□ -0.25
PDZRN3-205ENST00000466780 MSCO60682 206 aa13.46□□□□□ -0.25
PDZRN3-205ENST00000466780 LYPLA1O75608 230 aaPredicted RBP13.46□□□□□ -0.25
PDZRN3-205ENST00000466780 MAP3K6O95382 1288 aa13.46□□□□□ -0.25
PDZRN3-205ENST00000466780 RBL1P28749 1068 aa13.46□□□□□ -0.25
PDZRN3-205ENST00000466780 IRX4P78413 519 aa13.46□□□□□ -0.25
PDZRN3-205ENST00000466780 CXCL9Q07325 125 aa13.46□□□□□ -0.25
PDZRN3-205ENST00000466780 MSLNQ13421 630 aaPredicted RBP13.46□□□□□ -0.25
PDZRN3-205ENST00000466780 RALGPS1Q5JS13 557 aa13.46□□□□□ -0.25
PDZRN3-205ENST00000466780 ZNF772Q68DY9 489 aaPredicted RBP13.46□□□□□ -0.25
PDZRN3-205ENST00000466780 AAGABQ6PD74 315 aa13.46□□□□□ -0.25
PDZRN3-205ENST00000466780 DHDDSQ86SQ9 333 aa13.46□□□□□ -0.25
PDZRN3-205ENST00000466780 POU5F2Q8N7G0 328 aa13.46□□□□□ -0.25
PDZRN3-205ENST00000466780 OR6Y1Q8NGX8 325 aa13.46□□□□□ -0.25
PDZRN3-205ENST00000466780 RTP4Q96DX8 246 aa13.46□□□□□ -0.25
PDZRN3-205ENST00000466780 TWNKQ96RR1 684 aa13.46□□□□□ -0.25
PDZRN3-205ENST00000466780 APOL6Q9BWW8 343 aa13.46□□□□□ -0.25
PDZRN3-205ENST00000466780 ZDHHC7Q9NXF8 308 aa13.46□□□□□ -0.25
PDZRN3-205ENST00000466780 HMGXB4Q9UGU5 601 aa13.46□□□□□ -0.25
PDZRN3-205ENST00000466780 COL4A5P29400 1685 aa13.46□□□□□ -0.25
PDZRN3-205ENST00000466780 TOM1L1O75674 476 aa13.46□□□□□ -0.26
PDZRN3-205ENST00000466780 KRT38O76015 456 aa13.46□□□□□ -0.26
PDZRN3-205ENST00000466780 ATP5BP06576 529 aaKnown RBP13.46□□□□□ -0.26
PDZRN3-205ENST00000466780 APRTP07741 180 aa13.46□□□□□ -0.26
PDZRN3-205ENST00000466780 DPEP1P16444 411 aa13.46□□□□□ -0.26
PDZRN3-205ENST00000466780 HIC1Q14526 733 aa13.46□□□□□ -0.26
PDZRN3-205ENST00000466780 LRRC36Q1X8D7 754 aa13.46□□□□□ -0.26
PDZRN3-205ENST00000466780 EFHC1Q5JVL4 640 aa13.46□□□□□ -0.26
PDZRN3-205ENST00000466780 LPCAT4Q643R3 524 aa13.46□□□□□ -0.26
PDZRN3-205ENST00000466780 SNRNP48Q6IEG0 339 aaKnown RBP13.46□□□□□ -0.26
PDZRN3-205ENST00000466780 ACAD11Q709F0 780 aa13.46□□□□□ -0.26
PDZRN3-205ENST00000466780 MPP5Q8N3R9 675 aa13.46□□□□□ -0.26
PDZRN3-205ENST00000466780 PLD5Q8N7P1 536 aa13.46□□□□□ -0.26
PDZRN3-205ENST00000466780 REPS2Q8NFH8 660 aa13.46□□□□□ -0.26
PDZRN3-205ENST00000466780 APBB2Q92870 758 aa13.46□□□□□ -0.26
PDZRN3-205ENST00000466780 CDHR1Q96JP9 859 aa13.46□□□□□ -0.26
PDZRN3-205ENST00000466780 RNF157Q96PX1 679 aa13.46□□□□□ -0.26
PDZRN3-205ENST00000466780 ETNK2Q9NVF9 386 aa13.46□□□□□ -0.26
PDZRN3-205ENST00000466780 THAP1Q9NVV9 213 aa13.46□□□□□ -0.26
PDZRN3-205ENST00000466780 CPSF3Q9UKF6 684 aaKnown RBP13.46□□□□□ -0.26
PDZRN3-205ENST00000466780 PARP14Q460N5 1801 aa13.45□□□□□ -0.26
PDZRN3-205ENST00000466780 ARHGAP42A6NI28 874 aa13.45□□□□□ -0.26
PDZRN3-205ENST00000466780 FAM159BA6NKW6 160 aa13.45□□□□□ -0.26
PDZRN3-205ENST00000466780 MED7O43513 233 aa13.45□□□□□ -0.26
PDZRN3-205ENST00000466780 IL4RP24394 825 aa13.45□□□□□ -0.26
PDZRN3-205ENST00000466780 GRIA2P42262 883 aa13.45□□□□□ -0.26
PDZRN3-205ENST00000466780 MAGEA6P43360 314 aa13.45□□□□□ -0.26
PDZRN3-205ENST00000466780 CCNIQ14094 377 aa13.45□□□□□ -0.26
PDZRN3-205ENST00000466780 ATG14Q6ZNE5 492 aa13.45□□□□□ -0.26
PDZRN3-205ENST00000466780 ZNF534Q76KX8 674 aa13.45□□□□□ -0.26
PDZRN3-205ENST00000466780 ARHGAP18Q8N392 663 aa13.45□□□□□ -0.26
PDZRN3-205ENST00000466780 AGBL3Q8NEM8 1001 aa13.45□□□□□ -0.26
PDZRN3-205ENST00000466780 EPAS1Q99814 870 aa13.45□□□□□ -0.26
PDZRN3-205ENST00000466780 NIFKQ9BYG3 293 aaKnown RBP13.45□□□□□ -0.26
PDZRN3-205ENST00000466780 FRMD8Q9BZ67 464 aaPredicted RBP13.45□□□□□ -0.26
PDZRN3-205ENST00000466780 SMYD3Q9H7B4 428 aa13.45□□□□□ -0.26
PDZRN3-205ENST00000466780 MYOZ2Q9NPC6 264 aa13.45□□□□□ -0.26
PDZRN3-205ENST00000466780 ADAMTS6Q9UKP5 1117 aa13.45□□□□□ -0.26
PDZRN3-205ENST00000466780 COL11A1P12107 1806 aaPredicted RBP13.45□□□□□ -0.26
PDZRN3-205ENST00000466780 OGTO15294 1046 aa13.45□□□□□ -0.26
PDZRN3-205ENST00000466780 L1CAMP32004 1257 aa13.45□□□□□ -0.26
PDZRN3-205ENST00000466780 ZNF143P52747 638 aaPredicted RBP13.45□□□□□ -0.26
PDZRN3-205ENST00000466780 CNTN2Q02246 1040 aa13.45□□□□□ -0.26
PDZRN3-205ENST00000466780 TFDP2Q14188 446 aa13.45□□□□□ -0.26
PDZRN3-205ENST00000466780 ACAP1Q15027 740 aa13.45□□□□□ -0.26
PDZRN3-205ENST00000466780 C15orf59Q2T9L4 293 aaPredicted RBP13.45□□□□□ -0.26
PDZRN3-205ENST00000466780 FAM47CQ5HY64 1035 aa13.45□□□□□ -0.26
PDZRN3-205ENST00000466780 TEDDM1Q5T9Z0 273 aa13.45□□□□□ -0.26
PDZRN3-205ENST00000466780 DENND5BQ6ZUT9 1274 aa13.45□□□□□ -0.26
PDZRN3-205ENST00000466780 MARK2Q7KZI7 788 aaKnown RBP13.45□□□□□ -0.26
PDZRN3-205ENST00000466780 MAVSQ7Z434 540 aa13.45□□□□□ -0.26
PDZRN3-205ENST00000466780 RASSF3Q86WH2 238 aa13.45□□□□□ -0.26
PDZRN3-205ENST00000466780 PQLC3Q8N755 202 aa13.45□□□□□ -0.26
PDZRN3-205ENST00000466780 PRPF31Q8WWY3 499 aaKnown RBP13.45□□□□□ -0.26
PDZRN3-205ENST00000466780 SIGLEC10Q96LC7 697 aa13.45□□□□□ -0.26
PDZRN3-205ENST00000466780 ASNSD1Q9NWL6 643 aa13.45□□□□□ -0.26
PDZRN3-205ENST00000466780 DNAJC16Q9Y2G8 782 aa13.45□□□□□ -0.26
PDZRN3-205ENST00000466780 CCNT2O60583 730 aaKnown RBP13.44□□□□□ -0.26
PDZRN3-205ENST00000466780 MICAL2O94851 1124 aa13.44□□□□□ -0.26
PDZRN3-205ENST00000466780 HMGCRP04035 888 aa13.44□□□□□ -0.26
PDZRN3-205ENST00000466780 MAGEA3P43357 314 aa13.44□□□□□ -0.26
PDZRN3-205ENST00000466780 DYNC1I2Q13409 638 aaKnown RBP13.44□□□□□ -0.26
PDZRN3-205ENST00000466780 LAMB3Q13751 1172 aa13.44□□□□□ -0.26
PDZRN3-205ENST00000466780 TARBP2Q15633 366 aaKnown RBP13.44□□□□□ -0.26
PDZRN3-205ENST00000466780 FASTKD1Q53R41 847 aaKnown RBP13.44□□□□□ -0.26
PDZRN3-205ENST00000466780 CFAP157Q5JU67 520 aa13.44□□□□□ -0.26
PDZRN3-205ENST00000466780 FAM102AQ5T9C2 384 aaPredicted RBP13.44□□□□□ -0.26
PDZRN3-205ENST00000466780 MBLAC2Q68D91 279 aa13.44□□□□□ -0.26
PDZRN3-205ENST00000466780 DPY19L2Q6NUT2 758 aa13.44□□□□□ -0.26
PDZRN3-205ENST00000466780 C16orf46Q6P387 395 aa13.44□□□□□ -0.26
PDZRN3-205ENST00000466780 PGM2L1Q6PCE3 622 aa13.44□□□□□ -0.26
PDZRN3-205ENST00000466780 ARCQ7LC44 396 aa13.44□□□□□ -0.26
PDZRN3-205ENST00000466780 USP6NLQ92738 828 aa13.44□□□□□ -0.26
PDZRN3-205ENST00000466780 PIWIL1Q96J94 861 aaKnown RBP13.44□□□□□ -0.26
PDZRN3-205ENST00000466780 PCYT2Q99447 389 aa13.44□□□□□ -0.26
PDZRN3-205ENST00000466780 ACO2Q99798 780 aaKnown RBP13.44□□□□□ -0.26
PDZRN3-205ENST00000466780 ADPGKQ9BRR6 497 aa13.44□□□□□ -0.26
PDZRN3-205ENST00000466780 ELOVL4Q9GZR5 314 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms