RNA–Protein interactions for RNA: ENST00000466489.1

PMF1-204, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-204ENST00000466489 GRXCR2A6NFK2 248 aa10.48□□□□□ -0.73
PMF1-204ENST00000466489 MED7O43513 233 aa10.48□□□□□ -0.73
PMF1-204ENST00000466489 HCRTO43612 131 aa10.48□□□□□ -0.73
PMF1-204ENST00000466489 LRRN2O75325 713 aa10.48□□□□□ -0.73
PMF1-204ENST00000466489 MTA2O94776 668 aa10.48□□□□□ -0.73
PMF1-204ENST00000466489 SEC24AO95486 1093 aa10.48□□□□□ -0.73
PMF1-204ENST00000466489 GLI1P08151 1106 aa10.48□□□□□ -0.73
PMF1-204ENST00000466489 PLEKP08567 350 aaPredicted RBP10.48□□□□□ -0.73
PMF1-204ENST00000466489 VDRP11473 427 aa10.48□□□□□ -0.73
PMF1-204ENST00000466489 BDNFP23560 247 aa10.48□□□□□ -0.73
PMF1-204ENST00000466489 CYP2F1P24903 491 aa10.48□□□□□ -0.73
PMF1-204ENST00000466489 SLC8A1P32418 973 aa10.48□□□□□ -0.73
PMF1-204ENST00000466489 FNTAP49354 379 aa10.48□□□□□ -0.73
PMF1-204ENST00000466489 KLK7P49862 253 aa10.48□□□□□ -0.73
PMF1-204ENST00000466489 GPC5P78333 572 aa10.48□□□□□ -0.73
PMF1-204ENST00000466489 TFF2Q03403 129 aa10.48□□□□□ -0.73
PMF1-204ENST00000466489 NR1H3Q13133 447 aa10.48□□□□□ -0.73
PMF1-204ENST00000466489 ORC1Q13415 861 aa10.48□□□□□ -0.73
PMF1-204ENST00000466489 SMAD2Q15796 467 aaKnown RBP10.48□□□□□ -0.73
PMF1-204ENST00000466489 ARHGAP44Q17R89 818 aa10.48□□□□□ -0.73
PMF1-204ENST00000466489 PABPC1LQ4VXU2 614 aaKnown RBP10.48□□□□□ -0.73
PMF1-204ENST00000466489 CEP85LQ5SZL2 805 aa10.48□□□□□ -0.73
PMF1-204ENST00000466489 PHLDB3Q6NSJ2 640 aa10.48□□□□□ -0.73
PMF1-204ENST00000466489 TRMT10CQ7L0Y3 403 aaKnown RBP10.48□□□□□ -0.73
PMF1-204ENST00000466489 OTOP3Q7RTS5 596 aa10.48□□□□□ -0.73
PMF1-204ENST00000466489 FAM35AQ86V20 835 aa10.48□□□□□ -0.73
PMF1-204ENST00000466489 ARHGEF19Q8IW93 802 aa10.48□□□□□ -0.73
PMF1-204ENST00000466489 RBBP8NLQ8NC74 664 aaPredicted RBP10.48□□□□□ -0.73
PMF1-204ENST00000466489 SLC2A14Q8TDB8 520 aa10.48□□□□□ -0.73
PMF1-204ENST00000466489 ATRIPQ8WXE1 791 aa10.48□□□□□ -0.73
PMF1-204ENST00000466489 ACSF2Q96CM8 615 aaPredicted RBP10.48□□□□□ -0.73
PMF1-204ENST00000466489 CABS1Q96KC9 395 aa10.48□□□□□ -0.73
PMF1-204ENST00000466489 ASB2Q96Q27 587 aa10.48□□□□□ -0.73
PMF1-204ENST00000466489 FMO2Q99518 471 aa10.48□□□□□ -0.73
PMF1-204ENST00000466489 PKMYT1Q99640 499 aa10.48□□□□□ -0.73
PMF1-204ENST00000466489 CORO1BQ9BR76 489 aa10.48□□□□□ -0.73
PMF1-204ENST00000466489 ERP44Q9BS26 406 aa10.48□□□□□ -0.73
PMF1-204ENST00000466489 S1PR5Q9H228 398 aa10.48□□□□□ -0.73
PMF1-204ENST00000466489 PRDM6Q9NQX0 595 aa10.48□□□□□ -0.73
PMF1-204ENST00000466489 FAM49BQ9NUQ9 324 aa10.48□□□□□ -0.73
PMF1-204ENST00000466489 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.48□□□□□ -0.73
PMF1-204ENST00000466489 HMGXB4Q9UGU5 601 aa10.48□□□□□ -0.73
PMF1-204ENST00000466489 ZMYM5Q9UJ78 669 aa10.48□□□□□ -0.73
PMF1-204ENST00000466489 DNAJC12Q9UKB3 198 aa10.48□□□□□ -0.73
PMF1-204ENST00000466489 ZFP37Q9Y6Q3 630 aaPredicted RBP10.48□□□□□ -0.73
PMF1-204ENST00000466489 NCANO14594 1321 aa10.48□□□□□ -0.73
PMF1-204ENST00000466489 CLUHO75153 1309 aa10.48□□□□□ -0.73
PMF1-204ENST00000466489 ZNF638Q14966 1978 aaKnown RBP10.48□□□□□ -0.73
PMF1-204ENST00000466489 TCF20Q9UGU0 1960 aaKnown RBP10.47□□□□□ -0.73
PMF1-204ENST00000466489 BUB1O43683 1085 aa10.47□□□□□ -0.73
PMF1-204ENST00000466489 PPFIA2O75334 1257 aa10.47□□□□□ -0.73
PMF1-204ENST00000466489 AP1G2O75843 785 aa10.47□□□□□ -0.73
PMF1-204ENST00000466489 RTN3O95197 1032 aaPredicted RBP10.47□□□□□ -0.73
PMF1-204ENST00000466489 PAPLNO95428 1278 aa10.47□□□□□ -0.73
PMF1-204ENST00000466489 AGTP01019 485 aa10.47□□□□□ -0.73
PMF1-204ENST00000466489 CCDC130P13994 396 aa10.47□□□□□ -0.73
PMF1-204ENST00000466489 FSHRP23945 695 aa10.47□□□□□ -0.73
PMF1-204ENST00000466489 ADORA2BP29275 332 aa10.47□□□□□ -0.73
PMF1-204ENST00000466489 CDC25CP30307 473 aa10.47□□□□□ -0.73
PMF1-204ENST00000466489 CXCR5P32302 372 aa10.47□□□□□ -0.73
PMF1-204ENST00000466489 SLC1A1P43005 524 aa10.47□□□□□ -0.73
PMF1-204ENST00000466489 CCT5P48643 541 aa10.47□□□□□ -0.73
PMF1-204ENST00000466489 CARSP49589 748 aaKnown RBP10.47□□□□□ -0.73
PMF1-204ENST00000466489 BCAT1P54687 386 aa10.47□□□□□ -0.73
PMF1-204ENST00000466489 RAD23BP54727 409 aa10.47□□□□□ -0.73
PMF1-204ENST00000466489 GYS2P54840 703 aa10.47□□□□□ -0.73
PMF1-204ENST00000466489 PPP2R2AP63151 447 aa10.47□□□□□ -0.73
PMF1-204ENST00000466489 DR1Q01658 176 aa10.47□□□□□ -0.73
PMF1-204ENST00000466489 ARHGAP15Q53QZ3 475 aa10.47□□□□□ -0.73
PMF1-204ENST00000466489 TJAP1Q5JTD0 557 aa10.47□□□□□ -0.73
PMF1-204ENST00000466489 DENND2CQ68D51 928 aa10.47□□□□□ -0.73
PMF1-204ENST00000466489 DENND5BQ6ZUT9 1274 aa10.47□□□□□ -0.73
PMF1-204ENST00000466489 ZNF571Q7Z3V5 609 aaPredicted RBP10.47□□□□□ -0.73
PMF1-204ENST00000466489 CPLX4Q7Z7G2 160 aa10.47□□□□□ -0.73
PMF1-204ENST00000466489 NLRP14Q86W24 1093 aa10.47□□□□□ -0.73
PMF1-204ENST00000466489 ZNF677Q86XU0 584 aa10.47□□□□□ -0.73
PMF1-204ENST00000466489 CACNA2D3Q8IZS8 1091 aa10.47□□□□□ -0.73
PMF1-204ENST00000466489 TDRD5Q8NAT2 981 aaKnown RBP10.47□□□□□ -0.73
PMF1-204ENST00000466489 SLC30A5Q8TAD4 765 aa10.47□□□□□ -0.73
PMF1-204ENST00000466489 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.47□□□□□ -0.73
PMF1-204ENST00000466489 SUSD6Q92537 303 aa10.47□□□□□ -0.73
PMF1-204ENST00000466489 PSMG2Q969U7 264 aa10.47□□□□□ -0.73
PMF1-204ENST00000466489 ZNF707Q96C28 371 aaPredicted RBP10.47□□□□□ -0.73
PMF1-204ENST00000466489 SPATA17Q96L03 361 aa10.47□□□□□ -0.73
PMF1-204ENST00000466489 C8orf48Q96LL4 319 aa10.47□□□□□ -0.73
PMF1-204ENST00000466489 CCT8L2Q96SF2 557 aa10.47□□□□□ -0.73
PMF1-204ENST00000466489 HNRNPABQ99729 332 aaKnown RBP10.47□□□□□ -0.73
PMF1-204ENST00000466489 PHF7Q9BWX1 381 aaPredicted RBP10.47□□□□□ -0.73
PMF1-204ENST00000466489 B3GNT5Q9BYG0 378 aa10.47□□□□□ -0.73
PMF1-204ENST00000466489 PABPC3Q9H361 631 aaKnown RBP10.47□□□□□ -0.73
PMF1-204ENST00000466489 KDM4CQ9H3R0 1056 aa10.47□□□□□ -0.73
PMF1-204ENST00000466489 WDR6Q9NNW5 1121 aaKnown RBP10.47□□□□□ -0.73
PMF1-204ENST00000466489 AVENQ9NQS1 362 aaPredicted RBP10.47□□□□□ -0.73
PMF1-204ENST00000466489 TMLHEQ9NVH6 421 aa10.47□□□□□ -0.73
PMF1-204ENST00000466489 TMEM51Q9NW97 253 aa10.47□□□□□ -0.73
PMF1-204ENST00000466489 PCYOX1Q9UHG3 505 aa10.47□□□□□ -0.73
PMF1-204ENST00000466489 PLAAQ9Y263 795 aa10.47□□□□□ -0.73
PMF1-204ENST00000466489 MRPS23Q9Y3D9 190 aaKnown RBP10.47□□□□□ -0.73
PMF1-204ENST00000466489 CEP83Q9Y592 693 aa10.47□□□□□ -0.73
PMF1-204ENST00000466489 PATJQ8NI35 1801 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms