RNA–Protein interactions for RNA: ENST00000466154.5

SLX4-202, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 1 (best)

Gene SLX4, Length 3,228 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-202ENST00000466154 ARMCX1Q9P291 453 aa16.96■□□□□ 0.31
SLX4-202ENST00000466154 MRPL42Q9Y6G3 142 aaKnown RBP16.96■□□□□ 0.31
SLX4-202ENST00000466154 TEX264Q9Y6I9 313 aa16.96■□□□□ 0.31
SLX4-202ENST00000466154 GABBR2O75899 941 aa16.96■□□□□ 0.31
SLX4-202ENST00000466154 GNL1P36915 607 aaPredicted RBP16.96■□□□□ 0.31
SLX4-202ENST00000466154 INCA1Q0VD86 236 aa16.96■□□□□ 0.31
SLX4-202ENST00000466154 AP1B1Q10567 949 aa16.96■□□□□ 0.31
SLX4-202ENST00000466154 SLC10A2Q12908 348 aaPredicted RBP16.96■□□□□ 0.31
SLX4-202ENST00000466154 ACAP1Q15027 740 aa16.96■□□□□ 0.31
SLX4-202ENST00000466154 DCAF6Q58WW2 860 aa16.96■□□□□ 0.31
SLX4-202ENST00000466154 MARCH8Q5T0T0 291 aa16.96■□□□□ 0.31
SLX4-202ENST00000466154 ADAM32Q8TC27 787 aa16.96■□□□□ 0.31
SLX4-202ENST00000466154 SRPK1Q96SB4 655 aaKnown RBP16.96■□□□□ 0.31
SLX4-202ENST00000466154 NRDE2Q9H7Z3 1164 aa16.96■□□□□ 0.31
SLX4-202ENST00000466154 WDR90Q96KV7 1748 aa16.96■□□□□ 0.31
SLX4-202ENST00000466154 TRIP11Q15643 1979 aa16.96■□□□□ 0.31
SLX4-202ENST00000466154 SCN1AP35498 2009 aa16.96■□□□□ 0.31
SLX4-202ENST00000466154 CCL15-CCL14A0A0B4J2E2 113 aa16.96■□□□□ 0.31
SLX4-202ENST00000466154 SNAI1O95863 264 aaPredicted RBP16.96■□□□□ 0.31
SLX4-202ENST00000466154 SERPINB3P29508 390 aa16.96■□□□□ 0.31
SLX4-202ENST00000466154 ARFIP2P53365 341 aa16.96■□□□□ 0.31
SLX4-202ENST00000466154 TMPRSS15P98073 1019 aa16.96■□□□□ 0.31
SLX4-202ENST00000466154 NAA25Q14CX7 972 aa16.96■□□□□ 0.31
SLX4-202ENST00000466154 TAZQ16635 292 aa16.96■□□□□ 0.31
SLX4-202ENST00000466154 CCL15Q16663 113 aa16.96■□□□□ 0.31
SLX4-202ENST00000466154 HEATR6Q6AI08 1181 aaKnown RBP16.96■□□□□ 0.31
SLX4-202ENST00000466154 ZCCHC23Q6ZST2 131 aa16.96■□□□□ 0.31
SLX4-202ENST00000466154 DEPDC1BQ8WUY9 529 aa16.96■□□□□ 0.31
SLX4-202ENST00000466154 ATXN7L3BQ96GX2 97 aa16.96■□□□□ 0.31
SLX4-202ENST00000466154 GCOM2Q9BZD3 368 aaPredicted RBP16.96■□□□□ 0.31
SLX4-202ENST00000466154 NUMBLQ9Y6R0 609 aa16.96■□□□□ 0.31
SLX4-202ENST00000466154 E7ESA3 106 aa16.95■□□□□ 0.3
SLX4-202ENST00000466154 FAM187BQ17R55 369 aa16.95■□□□□ 0.3
SLX4-202ENST00000466154 ANKRD20A3Q5VUR7 823 aa16.95■□□□□ 0.3
SLX4-202ENST00000466154 DPY19L2Q6NUT2 758 aa16.95■□□□□ 0.3
SLX4-202ENST00000466154 CES3Q6UWW8 571 aa16.95■□□□□ 0.3
SLX4-202ENST00000466154 SLC44A1Q8WWI5 657 aa16.95■□□□□ 0.3
SLX4-202ENST00000466154 UTP4Q969X6 686 aaKnown RBP16.95■□□□□ 0.3
SLX4-202ENST00000466154 RAB3IPQ96QF0 476 aaPredicted RBP16.95■□□□□ 0.3
SLX4-202ENST00000466154 TBC1D10AQ9BXI6 508 aa16.95■□□□□ 0.3
SLX4-202ENST00000466154 SIP14410 1827 aa16.95■□□□□ 0.3
SLX4-202ENST00000466154 FAM237BA0A1B0GVD1 139 aa16.95■□□□□ 0.3
SLX4-202ENST00000466154 CYP2C9P11712 490 aa16.95■□□□□ 0.3
SLX4-202ENST00000466154 CLNS1AP54105 237 aaKnown RBP16.95■□□□□ 0.3
SLX4-202ENST00000466154 PITX1P78337 314 aaPredicted RBP16.95■□□□□ 0.3
SLX4-202ENST00000466154 ACVR2BQ13705 512 aa16.95■□□□□ 0.3
SLX4-202ENST00000466154 PDK2Q15119 407 aa16.95■□□□□ 0.3
SLX4-202ENST00000466154 MAMDC4Q6UXC1 1216 aa16.95■□□□□ 0.3
SLX4-202ENST00000466154 CAND1Q86VP6 1230 aaKnown RBP16.95■□□□□ 0.3
SLX4-202ENST00000466154 SLC26A11Q86WA9 606 aa16.95■□□□□ 0.3
SLX4-202ENST00000466154 TBCBQ99426 244 aa16.95■□□□□ 0.3
SLX4-202ENST00000466154 NFKBIZQ9BYH8 718 aa16.95■□□□□ 0.3
SLX4-202ENST00000466154 PTPRFP10586 1907 aa16.95■□□□□ 0.3
SLX4-202ENST00000466154 KRT37O76014 449 aa16.94■□□□□ 0.3
SLX4-202ENST00000466154 HOXA11P31270 313 aaPredicted RBP16.94■□□□□ 0.3
SLX4-202ENST00000466154 DGKDQ16760 1214 aa16.94■□□□□ 0.3
SLX4-202ENST00000466154 SLC27A1Q6PCB7 646 aa16.94■□□□□ 0.3
SLX4-202ENST00000466154 ASRGL1Q7L266 308 aa16.94■□□□□ 0.3
SLX4-202ENST00000466154 TTC7BQ86TV6 843 aa16.94■□□□□ 0.3
SLX4-202ENST00000466154 PPP1R14CQ8TAE6 165 aa16.94■□□□□ 0.3
SLX4-202ENST00000466154 APOPT1Q96IL0 206 aa16.94■□□□□ 0.3
SLX4-202ENST00000466154 AGAP3Q96P47 875 aa16.94■□□□□ 0.3
SLX4-202ENST00000466154 TMEM120AQ9BXJ8 343 aa16.94■□□□□ 0.3
SLX4-202ENST00000466154 SMYD2Q9NRG4 433 aa16.94■□□□□ 0.3
SLX4-202ENST00000466154 GJD2Q9UKL4 321 aa16.94■□□□□ 0.3
SLX4-202ENST00000466154 ADCY6O43306 1168 aa16.94■□□□□ 0.3
SLX4-202ENST00000466154 MMP3P08254 477 aa16.94■□□□□ 0.3
SLX4-202ENST00000466154 CSH1P0DML2 217 aa16.94■□□□□ 0.3
SLX4-202ENST00000466154 CSH2P0DML3 217 aa16.94■□□□□ 0.3
SLX4-202ENST00000466154 GRM5P41594 1212 aa16.94■□□□□ 0.3
SLX4-202ENST00000466154 RCN2Q14257 317 aa16.94■□□□□ 0.3
SLX4-202ENST00000466154 ZNF792Q3KQV3 632 aa16.94■□□□□ 0.3
SLX4-202ENST00000466154 TRIM68Q6AZZ1 485 aa16.94■□□□□ 0.3
SLX4-202ENST00000466154 NDUFAF2Q8N183 169 aa16.94■□□□□ 0.3
SLX4-202ENST00000466154 SLC35F5Q8WV83 523 aa16.94■□□□□ 0.3
SLX4-202ENST00000466154 MED10Q9BTT4 135 aa16.94■□□□□ 0.3
SLX4-202ENST00000466154 BTBD19C9JJ37 291 aa16.94■□□□□ 0.3
SLX4-202ENST00000466154 SPTLC1O15269 473 aa16.94■□□□□ 0.3
SLX4-202ENST00000466154 TM9SF1O15321 606 aa16.94■□□□□ 0.3
SLX4-202ENST00000466154 CHADO15335 359 aa16.94■□□□□ 0.3
SLX4-202ENST00000466154 SERPINB4P48594 390 aa16.94■□□□□ 0.3
SLX4-202ENST00000466154 SULT1E1P49888 294 aa16.94■□□□□ 0.3
SLX4-202ENST00000466154 OLIG2Q13516 323 aa16.94■□□□□ 0.3
SLX4-202ENST00000466154 UNC5AQ6ZN44 842 aa16.94■□□□□ 0.3
SLX4-202ENST00000466154 CTU1Q7Z7A3 348 aaKnown RBP16.94■□□□□ 0.3
SLX4-202ENST00000466154 MZB1Q8WU39 189 aa16.94■□□□□ 0.3
SLX4-202ENST00000466154 KHSRPQ92945 711 aaKnown RBP eCLIP16.94■□□□□ 0.3
SLX4-202ENST00000466154 TIMM13Q9Y5L4 95 aaPredicted RBP16.94■□□□□ 0.3
SLX4-202ENST00000466154 WDR27A2RRH5 827 aa16.93■□□□□ 0.3
SLX4-202ENST00000466154 MYL2P10916 166 aa16.93■□□□□ 0.3
SLX4-202ENST00000466154 ADIGQ0VDE8 80 aa16.93■□□□□ 0.3
SLX4-202ENST00000466154 PPP2R5DQ14738 602 aa16.93■□□□□ 0.3
SLX4-202ENST00000466154 FBXO47Q5MNV8 452 aa16.93■□□□□ 0.3
SLX4-202ENST00000466154 TTC39BQ5VTQ0 682 aaPredicted RBP16.93■□□□□ 0.3
SLX4-202ENST00000466154 PDCD7Q8N8D1 485 aaKnown RBP16.93■□□□□ 0.3
SLX4-202ENST00000466154 KCTD15Q96SI1 283 aaPredicted RBP16.93■□□□□ 0.3
SLX4-202ENST00000466154 VRTNQ9H8Y1 702 aa16.93■□□□□ 0.3
SLX4-202ENST00000466154 PPCSQ9HAB8 311 aa16.93■□□□□ 0.3
SLX4-202ENST00000466154 NOP53Q9NZM5 478 aaKnown RBP16.93■□□□□ 0.3
SLX4-202ENST00000466154 TTLL3Q9Y4R7 772 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms