RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 DCUN1D2Q6PH85 259 aa11.65□□□□□ -0.54
VCP-204ENST00000466100 KLHDC10Q6PID8 442 aa11.65□□□□□ -0.54
VCP-204ENST00000466100 PDZD4Q76G19 769 aaPredicted RBP11.65□□□□□ -0.54
VCP-204ENST00000466100 CCAR2Q8N163 923 aaKnown RBP11.65□□□□□ -0.54
VCP-204ENST00000466100 TXLNBQ8N3L3 684 aa11.65□□□□□ -0.54
VCP-204ENST00000466100 ITFG1Q8TB96 612 aa11.65□□□□□ -0.54
VCP-204ENST00000466100 DQX1Q8TE96 717 aaKnown RBP11.65□□□□□ -0.54
VCP-204ENST00000466100 RXFP2Q8WXD0 754 aa11.65□□□□□ -0.54
VCP-204ENST00000466100 SUSD6Q92537 303 aa11.65□□□□□ -0.54
VCP-204ENST00000466100 CENPIQ92674 756 aaPredicted RBP11.65□□□□□ -0.54
VCP-204ENST00000466100 BTBD6Q96KE9 485 aa11.65□□□□□ -0.54
VCP-204ENST00000466100 SLC22A12Q96S37 553 aa11.65□□□□□ -0.54
VCP-204ENST00000466100 TSGA10Q9BZW7 698 aa11.65□□□□□ -0.54
VCP-204ENST00000466100 SMOC2Q9H3U7 446 aa11.65□□□□□ -0.54
VCP-204ENST00000466100 UBE2ZQ9H832 354 aaPredicted RBP11.65□□□□□ -0.54
VCP-204ENST00000466100 WDR6Q9NNW5 1121 aaKnown RBP11.65□□□□□ -0.54
VCP-204ENST00000466100 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.65□□□□□ -0.54
VCP-204ENST00000466100 CALCOCO1Q9P1Z2 691 aa11.65□□□□□ -0.54
VCP-204ENST00000466100 ANAPC7Q9UJX3 599 aa11.65□□□□□ -0.54
VCP-204ENST00000466100 ZKSCAN5Q9Y2L8 839 aa11.65□□□□□ -0.54
VCP-204ENST00000466100 CCP110O43303 1012 aa11.64□□□□□ -0.55
VCP-204ENST00000466100 COCHO43405 550 aa11.64□□□□□ -0.55
VCP-204ENST00000466100 ENDOD1O94919 500 aa11.64□□□□□ -0.55
VCP-204ENST00000466100 NCAM1P13591 858 aa11.64□□□□□ -0.55
VCP-204ENST00000466100 PDGFRAP16234 1089 aa11.64□□□□□ -0.55
VCP-204ENST00000466100 PFKLP17858 780 aa11.64□□□□□ -0.55
VCP-204ENST00000466100 GPD1P21695 349 aa11.64□□□□□ -0.55
VCP-204ENST00000466100 DDX6P26196 483 aaKnown RBP eCLIP11.64□□□□□ -0.55
VCP-204ENST00000466100 RNASE9P60153 205 aaKnown RBP11.64□□□□□ -0.55
VCP-204ENST00000466100 TEAD2Q15562 447 aa11.64□□□□□ -0.55
VCP-204ENST00000466100 CCDC85BQ15834 202 aaPredicted RBP11.64□□□□□ -0.55
VCP-204ENST00000466100 C15orf59Q2T9L4 293 aaPredicted RBP11.64□□□□□ -0.55
VCP-204ENST00000466100 SLC25A52Q3SY17 297 aa11.64□□□□□ -0.55
VCP-204ENST00000466100 RAB6CQ53S08 254 aa11.64□□□□□ -0.55
VCP-204ENST00000466100 DCAF6Q58WW2 860 aa11.64□□□□□ -0.55
VCP-204ENST00000466100 HECTD3Q5T447 861 aa11.64□□□□□ -0.55
VCP-204ENST00000466100 BTBD8Q5XKL5 378 aa11.64□□□□□ -0.55
VCP-204ENST00000466100 TXNDC8Q6A555 127 aa11.64□□□□□ -0.55
VCP-204ENST00000466100 TAC4Q86UU9 113 aa11.64□□□□□ -0.55
VCP-204ENST00000466100 CPNE8Q86YQ8 564 aa11.64□□□□□ -0.55
VCP-204ENST00000466100 ARFGAP1Q8N6T3 406 aa11.64□□□□□ -0.55
VCP-204ENST00000466100 NIPA2Q8N8Q9 360 aa11.64□□□□□ -0.55
VCP-204ENST00000466100 LRRC57Q8N9N7 239 aa11.64□□□□□ -0.55
VCP-204ENST00000466100 TPCN2Q8NHX9 752 aa11.64□□□□□ -0.55
VCP-204ENST00000466100 MRPS31Q92665 395 aaKnown RBP11.64□□□□□ -0.55
VCP-204ENST00000466100 GOLGA1Q92805 767 aa11.64□□□□□ -0.55
VCP-204ENST00000466100 PGAP3Q96FM1 320 aaPredicted RBP11.64□□□□□ -0.55
VCP-204ENST00000466100 ZFRQ96KR1 1074 aaKnown RBP11.64□□□□□ -0.55
VCP-204ENST00000466100 CFAP57Q96MR6 1250 aa11.64□□□□□ -0.55
VCP-204ENST00000466100 CDK5RAP1Q96SZ6 601 aaKnown RBP11.64□□□□□ -0.55
VCP-204ENST00000466100 CNPY3Q9BT09 278 aa11.64□□□□□ -0.55
VCP-204ENST00000466100 RAB6CQ9H0N0 254 aa11.64□□□□□ -0.55
VCP-204ENST00000466100 ATXN3LQ9H3M9 355 aa11.64□□□□□ -0.55
VCP-204ENST00000466100 PIDD1Q9HB75 910 aa11.64□□□□□ -0.55
VCP-204ENST00000466100 RRN3Q9NYV6 651 aa11.64□□□□□ -0.55
VCP-204ENST00000466100 CD207Q9UJ71 328 aa11.64□□□□□ -0.55
VCP-204ENST00000466100 NUDT5Q9UKK9 219 aa11.64□□□□□ -0.55
VCP-204ENST00000466100 CAPN6Q9Y6Q1 641 aa11.64□□□□□ -0.55
VCP-204ENST00000466100 DOCK4Q8N1I0 1966 aa11.63□□□□□ -0.55
VCP-204ENST00000466100 VCANP13611 3396 aa11.63□□□□□ -0.55
VCP-204ENST00000466100 GRID2IPA4D2P6 1211 aa11.63□□□□□ -0.55
VCP-204ENST00000466100 GRXCR2A6NFK2 248 aa11.63□□□□□ -0.55
VCP-204ENST00000466100 SOBPA7XYQ1 873 aa11.63□□□□□ -0.55
VCP-204ENST00000466100 H3BQ06 376 aaPredicted RBP11.63□□□□□ -0.55
VCP-204ENST00000466100 ZNF197O14709 1029 aa11.63□□□□□ -0.55
VCP-204ENST00000466100 MDM4O15151 490 aa11.63□□□□□ -0.55
VCP-204ENST00000466100 IRAK2O43187 625 aa11.63□□□□□ -0.55
VCP-204ENST00000466100 ZSCAN12O43309 604 aa11.63□□□□□ -0.55
VCP-204ENST00000466100 KRT86O43790 486 aa11.63□□□□□ -0.55
VCP-204ENST00000466100 BUB1BO60566 1050 aaPredicted RBP11.63□□□□□ -0.55
VCP-204ENST00000466100 PROSCO94903 275 aa11.63□□□□□ -0.55
VCP-204ENST00000466100 TBX18O95935 607 aa11.63□□□□□ -0.55
VCP-204ENST00000466100 RALAP11233 206 aa11.63□□□□□ -0.55
VCP-204ENST00000466100 SDC4P31431 198 aa11.63□□□□□ -0.55
VCP-204ENST00000466100 MAN1A1P33908 653 aa11.63□□□□□ -0.55
VCP-204ENST00000466100 MTHFRP42898 656 aa11.63□□□□□ -0.55
VCP-204ENST00000466100 SH3PXD2AQ5TCZ1 1133 aa11.63□□□□□ -0.55
VCP-204ENST00000466100 C11orf63Q6NUN7 778 aa11.63□□□□□ -0.55
VCP-204ENST00000466100 STRADAQ7RTN6 431 aa11.63□□□□□ -0.55
VCP-204ENST00000466100 NPAS3Q8IXF0 933 aa11.63□□□□□ -0.55
VCP-204ENST00000466100 C17orf53Q8N3J3 647 aaPredicted RBP11.63□□□□□ -0.55
VCP-204ENST00000466100 RNF10Q8N5U6 811 aaKnown RBP11.63□□□□□ -0.55
VCP-204ENST00000466100 TRIM44Q96DX7 344 aaPredicted RBP11.63□□□□□ -0.55
VCP-204ENST00000466100 GCNAQ96QF7 691 aa11.63□□□□□ -0.55
VCP-204ENST00000466100 TBCBQ99426 244 aa11.63□□□□□ -0.55
VCP-204ENST00000466100 SLC46A2Q9BY10 475 aa11.63□□□□□ -0.55
VCP-204ENST00000466100 RNF38Q9H0F5 515 aa11.63□□□□□ -0.55
VCP-204ENST00000466100 TASP1Q9H6P5 420 aa11.63□□□□□ -0.55
VCP-204ENST00000466100 LZTFL1Q9NQ48 299 aa11.63□□□□□ -0.55
VCP-204ENST00000466100 OLA1Q9NTK5 396 aaKnown RBP11.63□□□□□ -0.55
VCP-204ENST00000466100 TRMT1Q9NXH9 659 aaKnown RBP11.63□□□□□ -0.55
VCP-204ENST00000466100 MRPS23Q9Y3D9 190 aaKnown RBP11.63□□□□□ -0.55
VCP-204ENST00000466100 PAXBP1Q9Y5B6 917 aa11.63□□□□□ -0.55
VCP-204ENST00000466100 MACROD2A1Z1Q3 448 aa11.62□□□□□ -0.55
VCP-204ENST00000466100 MYO1FO00160 1098 aa11.62□□□□□ -0.55
VCP-204ENST00000466100 CAPN9O14815 690 aa11.62□□□□□ -0.55
VCP-204ENST00000466100 MSI1O43347 362 aaKnown RBP11.62□□□□□ -0.55
VCP-204ENST00000466100 BUB1O43683 1085 aa11.62□□□□□ -0.55
VCP-204ENST00000466100 MOCS3O95396 460 aa11.62□□□□□ -0.55
VCP-204ENST00000466100 TRUB2O95900 331 aaKnown RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms