RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 MASTLQ96GX5 879 aa20.44■□□□□ 0.86
SDF4-205ENST00000465727 MRPS26Q9BYN8 205 aaKnown RBP20.44■□□□□ 0.86
SDF4-205ENST00000465727 DNAAF2Q9NVR5 837 aaKnown RBP20.44■□□□□ 0.86
SDF4-205ENST00000465727 DTNAQ9Y4J8 743 aa20.44■□□□□ 0.86
SDF4-205ENST00000465727 CNTNAP2Q9UHC6 1331 aa20.43■□□□□ 0.86
SDF4-205ENST00000465727 VILLO15195 856 aa20.43■□□□□ 0.86
SDF4-205ENST00000465727 CD48P09326 243 aa20.43■□□□□ 0.86
SDF4-205ENST00000465727 NPR1P16066 1061 aa20.43■□□□□ 0.86
SDF4-205ENST00000465727 PRDX6P30041 224 aa20.43■□□□□ 0.86
SDF4-205ENST00000465727 ALDH1B1P30837 517 aa20.43■□□□□ 0.86
SDF4-205ENST00000465727 MAGEA6P43360 314 aa20.43■□□□□ 0.86
SDF4-205ENST00000465727 GABRB2P47870 512 aa20.43■□□□□ 0.86
SDF4-205ENST00000465727 INHBCP55103 352 aa20.43■□□□□ 0.86
SDF4-205ENST00000465727 FBXL19Q6PCT2 694 aa20.43■□□□□ 0.86
SDF4-205ENST00000465727 TMC7Q7Z402 723 aa20.43■□□□□ 0.86
SDF4-205ENST00000465727 TRIM74Q86UV6 250 aa20.43■□□□□ 0.86
SDF4-205ENST00000465727 TRIM73Q86UV7 250 aa20.43■□□□□ 0.86
SDF4-205ENST00000465727 FBXW8Q8N3Y1 598 aa20.43■□□□□ 0.86
SDF4-205ENST00000465727 PPP1R14BQ96C90 147 aa20.43■□□□□ 0.86
SDF4-205ENST00000465727 RTP4Q96DX8 246 aa20.43■□□□□ 0.86
SDF4-205ENST00000465727 CATSPER2Q96P56 530 aa20.43■□□□□ 0.86
SDF4-205ENST00000465727 KCNK16Q96T55 309 aa20.43■□□□□ 0.86
SDF4-205ENST00000465727 APOL6Q9BWW8 343 aa20.43■□□□□ 0.86
SDF4-205ENST00000465727 POLR3FQ9H1D9 316 aaPredicted RBP20.43■□□□□ 0.86
SDF4-205ENST00000465727 RAB6BQ9NRW1 208 aa20.43■□□□□ 0.86
SDF4-205ENST00000465727 RAB26Q9ULW5 256 aa20.43■□□□□ 0.86
SDF4-205ENST00000465727 SCN9AQ15858 1988 aa20.42■□□□□ 0.86
SDF4-205ENST00000465727 AVILO75366 819 aa20.42■□□□□ 0.86
SDF4-205ENST00000465727 LGR5O75473 907 aa20.42■□□□□ 0.86
SDF4-205ENST00000465727 OR6B1O95007 311 aa20.42■□□□□ 0.86
SDF4-205ENST00000465727 STBD1O95210 358 aa20.42■□□□□ 0.86
SDF4-205ENST00000465727 EIF2AK2P19525 551 aaKnown RBP20.42■□□□□ 0.86
SDF4-205ENST00000465727 CAP2P40123 477 aa20.42■□□□□ 0.86
SDF4-205ENST00000465727 YWHAEP62258 255 aaKnown RBP20.42■□□□□ 0.86
SDF4-205ENST00000465727 HPCAP84074 193 aa20.42■□□□□ 0.86
SDF4-205ENST00000465727 TFDP2Q14188 446 aa20.42■□□□□ 0.86
SDF4-205ENST00000465727 GRAMD1BQ3KR37 738 aa20.42■□□□□ 0.86
SDF4-205ENST00000465727 C1orf228Q6PIY5 440 aa20.42■□□□□ 0.86
SDF4-205ENST00000465727 OR5B17Q8NGF7 314 aa20.42■□□□□ 0.86
SDF4-205ENST00000465727 HSFX1Q9UBD0 423 aa20.42■□□□□ 0.86
SDF4-205ENST00000465727 GABBR1Q9UBS5 961 aa20.42■□□□□ 0.86
SDF4-205ENST00000465727 PPP1R1BQ9UD71 204 aaPredicted RBP20.42■□□□□ 0.86
SDF4-205ENST00000465727 DMTF1Q9Y222 760 aa20.42■□□□□ 0.86
SDF4-205ENST00000465727 DNAJC16Q9Y2G8 782 aa20.42■□□□□ 0.86
SDF4-205ENST00000465727 KAT6AQ92794 2004 aa20.42■□□□□ 0.86
SDF4-205ENST00000465727 FAM159BA6NKW6 160 aa20.42■□□□□ 0.86
SDF4-205ENST00000465727 H3BNX3 289 aa20.42■□□□□ 0.86
SDF4-205ENST00000465727 PGM3O95394 542 aa20.42■□□□□ 0.86
SDF4-205ENST00000465727 TFAP2AP05549 437 aa20.42■□□□□ 0.86
SDF4-205ENST00000465727 ALOX15P16050 662 aaPredicted RBP20.42■□□□□ 0.86
SDF4-205ENST00000465727 BMPR2Q13873 1038 aa20.42■□□□□ 0.86
SDF4-205ENST00000465727 FASTKD1Q53R41 847 aaKnown RBP20.42■□□□□ 0.86
SDF4-205ENST00000465727 MBLAC2Q68D91 279 aa20.42■□□□□ 0.86
SDF4-205ENST00000465727 CATSPER1Q8NEC5 780 aa20.42■□□□□ 0.86
SDF4-205ENST00000465727 JOSD2Q8TAC2 188 aa20.42■□□□□ 0.86
SDF4-205ENST00000465727 SHKBP1Q8TBC3 707 aa20.42■□□□□ 0.86
SDF4-205ENST00000465727 ACMSDQ8TDX5 336 aa20.42■□□□□ 0.86
SDF4-205ENST00000465727 MSTO1Q9BUK6 570 aa20.42■□□□□ 0.86
SDF4-205ENST00000465727 KLC2Q9H0B6 622 aa20.42■□□□□ 0.86
SDF4-205ENST00000465727 LHX5Q9H2C1 402 aa20.42■□□□□ 0.86
SDF4-205ENST00000465727 CISHQ9NSE2 258 aa20.42■□□□□ 0.86
SDF4-205ENST00000465727 ARHGAP10A1A4S6 786 aa20.41■□□□□ 0.86
SDF4-205ENST00000465727 HNRNPRO43390 633 aaKnown RBP20.41■□□□□ 0.86
SDF4-205ENST00000465727 TOM1L1O75674 476 aa20.41■□□□□ 0.86
SDF4-205ENST00000465727 PDE5AO76074 875 aa20.41■□□□□ 0.86
SDF4-205ENST00000465727 SETSIPP0DME0 302 aa20.41■□□□□ 0.86
SDF4-205ENST00000465727 BAG6P46379 1132 aa20.41■□□□□ 0.86
SDF4-205ENST00000465727 ALDH1A3P47895 512 aa20.41■□□□□ 0.86
SDF4-205ENST00000465727 MTTPP55157 894 aa20.41■□□□□ 0.86
SDF4-205ENST00000465727 TBL3Q12788 808 aaKnown RBP20.41■□□□□ 0.86
SDF4-205ENST00000465727 ZYXQ15942 572 aaKnown RBP20.41■□□□□ 0.86
SDF4-205ENST00000465727 TEDDM1Q5T9Z0 273 aa20.41■□□□□ 0.86
SDF4-205ENST00000465727 RBM44Q6ZP01 1051 aaKnown RBP20.41■□□□□ 0.86
SDF4-205ENST00000465727 AHI1Q8N157 1196 aa20.41■□□□□ 0.86
SDF4-205ENST00000465727 MCUQ8NE86 351 aa20.41■□□□□ 0.86
SDF4-205ENST00000465727 GSDMBQ8TAX9 411 aa20.41■□□□□ 0.86
SDF4-205ENST00000465727 CALN1Q9BXU9 219 aa20.41■□□□□ 0.86
SDF4-205ENST00000465727 NIF3L1Q9GZT8 377 aa20.41■□□□□ 0.86
SDF4-205ENST00000465727 USP29Q9HBJ7 922 aa20.41■□□□□ 0.86
SDF4-205ENST00000465727 SMYD2Q9NRG4 433 aa20.41■□□□□ 0.86
SDF4-205ENST00000465727 HOMER2Q9NSB8 354 aa20.41■□□□□ 0.86
SDF4-205ENST00000465727 PSMD13Q9UNM6 376 aa20.41■□□□□ 0.86
SDF4-205ENST00000465727 ZSCAN9O15535 394 aaPredicted RBP20.41■□□□□ 0.86
SDF4-205ENST00000465727 TNFAIP8O95379 198 aa20.41■□□□□ 0.86
SDF4-205ENST00000465727 CSH1P0DML2 217 aa20.41■□□□□ 0.86
SDF4-205ENST00000465727 CSH2P0DML3 217 aa20.41■□□□□ 0.86
SDF4-205ENST00000465727 DESP17661 470 aa20.41■□□□□ 0.86
SDF4-205ENST00000465727 GRK2P25098 689 aa20.41■□□□□ 0.86
SDF4-205ENST00000465727 SLC1A6P48664 564 aa20.41■□□□□ 0.86
SDF4-205ENST00000465727 EN1Q05925 392 aaPredicted RBP20.41■□□□□ 0.86
SDF4-205ENST00000465727 GRM1Q13255 1194 aa20.41■□□□□ 0.86
SDF4-205ENST00000465727 TLR1Q15399 786 aa20.41■□□□□ 0.86
SDF4-205ENST00000465727 PTPN20Q4JDL3 420 aa20.41■□□□□ 0.86
SDF4-205ENST00000465727 BORAQ6PGQ7 559 aa20.41■□□□□ 0.86
SDF4-205ENST00000465727 ZCCHC23Q6ZST2 131 aa20.41■□□□□ 0.86
SDF4-205ENST00000465727 DENND5BQ6ZUT9 1274 aa20.41■□□□□ 0.86
SDF4-205ENST00000465727 KIAA0319LQ8IZA0 1049 aa20.41■□□□□ 0.86
SDF4-205ENST00000465727 POU5F2Q8N7G0 328 aa20.41■□□□□ 0.86
SDF4-205ENST00000465727 PPP4R1Q8TF05 950 aa20.41■□□□□ 0.86
SDF4-205ENST00000465727 GFM2Q969S9 779 aaKnown RBP20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms