RNA–Protein interactions for RNA: ENST00000465601.1

CHPF2-202, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 3

Gene CHPF2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-202ENST00000465601 MARCH2Q9P0N8 246 aa12.96□□□□□ -0.33
CHPF2-202ENST00000465601 SFMBT1Q9UHJ3 866 aa12.96□□□□□ -0.33
CHPF2-202ENST00000465601 STRIP2Q9ULQ0 834 aa12.96□□□□□ -0.33
CHPF2-202ENST00000465601 MYO6Q9UM54 1294 aa12.96□□□□□ -0.33
CHPF2-202ENST00000465601 PIAS3Q9Y6X2 628 aa12.96□□□□□ -0.33
CHPF2-202ENST00000465601 COL4A2P08572 1712 aa12.96□□□□□ -0.34
CHPF2-202ENST00000465601 CACNA1HO95180 2353 aa12.95□□□□□ -0.34
CHPF2-202ENST00000465601 PRR33A8MZF0 331 aa12.95□□□□□ -0.34
CHPF2-202ENST00000465601 SART1O43290 800 aaKnown RBP12.95□□□□□ -0.34
CHPF2-202ENST00000465601 CBFA2T2O43439 604 aa12.95□□□□□ -0.34
CHPF2-202ENST00000465601 LSM8O95777 96 aaKnown RBP12.95□□□□□ -0.34
CHPF2-202ENST00000465601 FYNP06241 537 aa12.95□□□□□ -0.34
CHPF2-202ENST00000465601 TPM3P06753 285 aa12.95□□□□□ -0.34
CHPF2-202ENST00000465601 CCDC172P0C7W6 258 aa12.95□□□□□ -0.34
CHPF2-202ENST00000465601 SNX16P57768 344 aa12.95□□□□□ -0.34
CHPF2-202ENST00000465601 STARD6P59095 220 aa12.95□□□□□ -0.34
CHPF2-202ENST00000465601 NOMO3P69849 1222 aa12.95□□□□□ -0.34
CHPF2-202ENST00000465601 COG7P83436 770 aa12.95□□□□□ -0.34
CHPF2-202ENST00000465601 PRKCQQ04759 706 aa12.95□□□□□ -0.34
CHPF2-202ENST00000465601 GOLGA8FQ08AF8 430 aa12.95□□□□□ -0.34
CHPF2-202ENST00000465601 GOLGA8DPQ0D2H9 430 aa12.95□□□□□ -0.34
CHPF2-202ENST00000465601 TAF5Q15542 800 aa12.95□□□□□ -0.34
CHPF2-202ENST00000465601 ASIC2Q16515 512 aa12.95□□□□□ -0.34
CHPF2-202ENST00000465601 C2CD6Q53TS8 623 aa12.95□□□□□ -0.34
CHPF2-202ENST00000465601 FIGNQ5HY92 759 aa12.95□□□□□ -0.34
CHPF2-202ENST00000465601 SFMBT2Q5VUG0 894 aa12.95□□□□□ -0.34
CHPF2-202ENST00000465601 FAM183BPQ6ZVS7 135 aa12.95□□□□□ -0.34
CHPF2-202ENST00000465601 FMNL3Q8IVF7 1028 aa12.95□□□□□ -0.34
CHPF2-202ENST00000465601 FBXL6Q8N531 539 aa12.95□□□□□ -0.34
CHPF2-202ENST00000465601 IPO4Q8TEX9 1081 aaKnown RBP12.95□□□□□ -0.34
CHPF2-202ENST00000465601 PIWIL1Q96J94 861 aaKnown RBP12.95□□□□□ -0.34
CHPF2-202ENST00000465601 AGPAT1Q99943 283 aa12.95□□□□□ -0.34
CHPF2-202ENST00000465601 FOXQ1Q9C009 403 aa12.95□□□□□ -0.34
CHPF2-202ENST00000465601 ECT2Q9H8V3 914 aa12.95□□□□□ -0.34
CHPF2-202ENST00000465601 OLA1Q9NTK5 396 aaKnown RBP12.95□□□□□ -0.34
CHPF2-202ENST00000465601 SEPT11Q9NVA2 429 aaKnown RBP12.95□□□□□ -0.34
CHPF2-202ENST00000465601 NAALADL1Q9UQQ1 740 aa12.95□□□□□ -0.34
CHPF2-202ENST00000465601 SHISA7A6NL88 538 aa12.94□□□□□ -0.34
CHPF2-202ENST00000465601 SLC9A3R1O14745 358 aaPredicted RBP12.94□□□□□ -0.34
CHPF2-202ENST00000465601 GREM1O60565 184 aa12.94□□□□□ -0.34
CHPF2-202ENST00000465601 GRAP2O75791 330 aa12.94□□□□□ -0.34
CHPF2-202ENST00000465601 STC2O76061 302 aa12.94□□□□□ -0.34
CHPF2-202ENST00000465601 CYP1A1P04798 512 aaPredicted RBP12.94□□□□□ -0.34
CHPF2-202ENST00000465601 NCAM1P13591 858 aa12.94□□□□□ -0.34
CHPF2-202ENST00000465601 YWHAZP63104 245 aaKnown RBP12.94□□□□□ -0.34
CHPF2-202ENST00000465601 SLC6A3Q01959 620 aa12.94□□□□□ -0.34
CHPF2-202ENST00000465601 SYPL2Q5VXT5 272 aa12.94□□□□□ -0.34
CHPF2-202ENST00000465601 E4F1Q66K89 784 aaPredicted RBP12.94□□□□□ -0.34
CHPF2-202ENST00000465601 MSANTD2Q6P1R3 559 aa12.94□□□□□ -0.34
CHPF2-202ENST00000465601 TRIM72Q6ZMU5 477 aa12.94□□□□□ -0.34
CHPF2-202ENST00000465601 HTR3DQ70Z44 454 aa12.94□□□□□ -0.34
CHPF2-202ENST00000465601 BBS7Q8IWZ6 715 aa12.94□□□□□ -0.34
CHPF2-202ENST00000465601 ADGRG2Q8IZP9 1017 aa12.94□□□□□ -0.34
CHPF2-202ENST00000465601 KIAA1958Q8N8K9 716 aa12.94□□□□□ -0.34
CHPF2-202ENST00000465601 SLC30A5Q8TAD4 765 aa12.94□□□□□ -0.34
CHPF2-202ENST00000465601 ATP2A3Q93084 1043 aa12.94□□□□□ -0.34
CHPF2-202ENST00000465601 C18orf8Q96DM3 657 aa12.94□□□□□ -0.34
CHPF2-202ENST00000465601 C8orf33Q9H7E9 229 aaPredicted RBP12.94□□□□□ -0.34
CHPF2-202ENST00000465601 AIPL1Q9NZN9 384 aa12.94□□□□□ -0.34
CHPF2-202ENST00000465601 TBC1D14Q9P2M4 693 aa12.94□□□□□ -0.34
CHPF2-202ENST00000465601 LSM7Q9UK45 103 aaKnown RBP12.94□□□□□ -0.34
CHPF2-202ENST00000465601 MTF2Q9Y483 593 aaPredicted RBP12.94□□□□□ -0.34
CHPF2-202ENST00000465601 MUC6Q6W4X9 2439 aa12.93□□□□□ -0.34
CHPF2-202ENST00000465601 A0A1W2PQJ5 194 aa12.93□□□□□ -0.34
CHPF2-202ENST00000465601 KANSL1LA0AUZ9 987 aa12.93□□□□□ -0.34
CHPF2-202ENST00000465601 SPECC1L-ADORA2AF8WAN1 911 aa12.93□□□□□ -0.34
CHPF2-202ENST00000465601 MAN2B1O00754 1011 aa12.93□□□□□ -0.34
CHPF2-202ENST00000465601 CAPN9O14815 690 aa12.93□□□□□ -0.34
CHPF2-202ENST00000465601 AP5Z1O43299 807 aa12.93□□□□□ -0.34
CHPF2-202ENST00000465601 MSI1O43347 362 aaKnown RBP12.93□□□□□ -0.34
CHPF2-202ENST00000465601 PI15O43692 258 aa12.93□□□□□ -0.34
CHPF2-202ENST00000465601 NFATC1O95644 943 aa12.93□□□□□ -0.34
CHPF2-202ENST00000465601 KLKB1P03952 638 aa12.93□□□□□ -0.34
CHPF2-202ENST00000465601 SKILP12757 684 aa12.93□□□□□ -0.34
CHPF2-202ENST00000465601 UNGP13051 313 aaPredicted RBP12.93□□□□□ -0.34
CHPF2-202ENST00000465601 GLULP15104 373 aa12.93□□□□□ -0.34
CHPF2-202ENST00000465601 TNFAIP3P21580 790 aa12.93□□□□□ -0.34
CHPF2-202ENST00000465601 CTHP32929 405 aa12.93□□□□□ -0.34
CHPF2-202ENST00000465601 GABRB2P47870 512 aa12.93□□□□□ -0.34
CHPF2-202ENST00000465601 NR1H3Q13133 447 aa12.93□□□□□ -0.34
CHPF2-202ENST00000465601 UBXN2BQ14CS0 331 aa12.93□□□□□ -0.34
CHPF2-202ENST00000465601 CLEC16AQ2KHT3 1053 aa12.93□□□□□ -0.34
CHPF2-202ENST00000465601 EFHC1Q5JVL4 640 aa12.93□□□□□ -0.34
CHPF2-202ENST00000465601 CWF19L1Q69YN2 538 aaKnown RBP12.93□□□□□ -0.34
CHPF2-202ENST00000465601 ASTLQ6HA08 431 aaPredicted RBP12.93□□□□□ -0.34
CHPF2-202ENST00000465601 RHBDF2Q6PJF5 856 aa12.93□□□□□ -0.34
CHPF2-202ENST00000465601 TXNDC11Q6PKC3 985 aa12.93□□□□□ -0.34
CHPF2-202ENST00000465601 OLFML1Q6UWY5 402 aa12.93□□□□□ -0.34
CHPF2-202ENST00000465601 ZNF852Q6ZMS4 543 aa12.93□□□□□ -0.34
CHPF2-202ENST00000465601 PHLDB2Q86SQ0 1253 aa12.93□□□□□ -0.34
CHPF2-202ENST00000465601 SUGP1Q8IWZ8 645 aaKnown RBP12.93□□□□□ -0.34
CHPF2-202ENST00000465601 DEFB106AQ8N104 65 aa12.93□□□□□ -0.34
CHPF2-202ENST00000465601 CPA6Q8N4T0 437 aa12.93□□□□□ -0.34
CHPF2-202ENST00000465601 DQX1Q8TE96 717 aaKnown RBP12.93□□□□□ -0.34
CHPF2-202ENST00000465601 FAM3CQ92520 227 aa12.93□□□□□ -0.34
CHPF2-202ENST00000465601 DDX23Q9BUQ8 820 aaKnown RBP12.93□□□□□ -0.34
CHPF2-202ENST00000465601 HAUS4Q9H6D7 363 aa12.93□□□□□ -0.34
CHPF2-202ENST00000465601 POPDC2Q9HBU9 364 aa12.93□□□□□ -0.34
CHPF2-202ENST00000465601 CAPN11Q9UMQ6 739 aa12.93□□□□□ -0.34
CHPF2-202ENST00000465601 NDRG2Q9UN36 371 aaKnown RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms