RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 CMASQ8NFW8 434 aaPredicted RBP17.7■□□□□ 0.42
EXOSC3-203ENST00000465229 ACTRT1Q8TDG2 376 aa17.7■□□□□ 0.42
EXOSC3-203ENST00000465229 HES6Q96HZ4 224 aa17.7■□□□□ 0.42
EXOSC3-203ENST00000465229 SLITRK1Q96PX8 696 aa17.7■□□□□ 0.42
EXOSC3-203ENST00000465229 SFXN1Q9H9B4 322 aa17.7■□□□□ 0.42
EXOSC3-203ENST00000465229 HCFC1R1Q9NWW0 138 aa17.7■□□□□ 0.42
EXOSC3-203ENST00000465229 GMIPQ9P107 970 aa17.7■□□□□ 0.42
EXOSC3-203ENST00000465229 CLEC1BQ9P126 229 aa17.7■□□□□ 0.42
EXOSC3-203ENST00000465229 TMEM59LQ9UK28 342 aa17.7■□□□□ 0.42
EXOSC3-203ENST00000465229 AMFRQ9UKV5 643 aa17.7■□□□□ 0.42
EXOSC3-203ENST00000465229 GRAP2O75791 330 aa17.69■□□□□ 0.42
EXOSC3-203ENST00000465229 KRT3P12035 628 aa17.69■□□□□ 0.42
EXOSC3-203ENST00000465229 PTPN2P17706 415 aa17.69■□□□□ 0.42
EXOSC3-203ENST00000465229 RNASE9P60153 205 aaKnown RBP17.69■□□□□ 0.42
EXOSC3-203ENST00000465229 RPL7AP62424 266 aaKnown RBP17.69■□□□□ 0.42
EXOSC3-203ENST00000465229 YWHAZP63104 245 aaKnown RBP17.69■□□□□ 0.42
EXOSC3-203ENST00000465229 C2orf54Q08AI8 447 aa17.69■□□□□ 0.42
EXOSC3-203ENST00000465229 MAP9Q49MG5 647 aa17.69■□□□□ 0.42
EXOSC3-203ENST00000465229 BSPRYQ5W0U4 402 aa17.69■□□□□ 0.42
EXOSC3-203ENST00000465229 C11orf63Q6NUN7 778 aa17.69■□□□□ 0.42
EXOSC3-203ENST00000465229 SYCE2Q6PIF2 218 aa17.69■□□□□ 0.42
EXOSC3-203ENST00000465229 TMC8Q8IU68 726 aa17.69■□□□□ 0.42
EXOSC3-203ENST00000465229 FAM149B1Q96BN6 582 aa17.69■□□□□ 0.42
EXOSC3-203ENST00000465229 PSMB7Q99436 277 aa17.69■□□□□ 0.42
EXOSC3-203ENST00000465229 CORO1BQ9BR76 489 aa17.69■□□□□ 0.42
EXOSC3-203ENST00000465229 NUP85Q9BW27 656 aa17.69■□□□□ 0.42
EXOSC3-203ENST00000465229 NMUR1Q9HB89 426 aa17.69■□□□□ 0.42
EXOSC3-203ENST00000465229 IL21Q9HBE4 155 aa17.69■□□□□ 0.42
EXOSC3-203ENST00000465229 METTL5Q9NRN9 209 aaKnown RBP17.69■□□□□ 0.42
EXOSC3-203ENST00000465229 ASNSD1Q9NWL6 643 aa17.69■□□□□ 0.42
EXOSC3-203ENST00000465229 OSER1Q9NX31 292 aa17.69■□□□□ 0.42
EXOSC3-203ENST00000465229 MTMR10Q9NXD2 777 aa17.69■□□□□ 0.42
EXOSC3-203ENST00000465229 DNMT3BQ9UBC3 853 aaKnown RBP17.69■□□□□ 0.42
EXOSC3-203ENST00000465229 UXTQ9UBK9 157 aaPredicted RBP17.69■□□□□ 0.42
EXOSC3-203ENST00000465229 XIRP2A4UGR9 3374 aa17.69■□□□□ 0.42
EXOSC3-203ENST00000465229 PATJQ8NI35 1801 aa17.69■□□□□ 0.42
EXOSC3-203ENST00000465229 A0A1W2PQH9 124 aa17.69■□□□□ 0.42
EXOSC3-203ENST00000465229 KCNK3O14649 394 aa17.69■□□□□ 0.42
EXOSC3-203ENST00000465229 BUB1BO60566 1050 aaPredicted RBP17.69■□□□□ 0.42
EXOSC3-203ENST00000465229 F11P03951 625 aa17.69■□□□□ 0.42
EXOSC3-203ENST00000465229 FYNP06241 537 aa17.69■□□□□ 0.42
EXOSC3-203ENST00000465229 GLI1P08151 1106 aa17.69■□□□□ 0.42
EXOSC3-203ENST00000465229 ZDHHC11BP0C7U3 371 aa17.69■□□□□ 0.42
EXOSC3-203ENST00000465229 RFC1P35251 1148 aaPredicted RBP17.69■□□□□ 0.42
EXOSC3-203ENST00000465229 YWHAGP61981 247 aaKnown RBP eCLIP17.69■□□□□ 0.42
EXOSC3-203ENST00000465229 DLX2Q07687 328 aaPredicted RBP17.69■□□□□ 0.42
EXOSC3-203ENST00000465229 TMEM150AQ86TG1 271 aa17.69■□□□□ 0.42
EXOSC3-203ENST00000465229 KRT222Q8N1A0 295 aa17.69■□□□□ 0.42
EXOSC3-203ENST00000465229 JOSD2Q8TAC2 188 aa17.69■□□□□ 0.42
EXOSC3-203ENST00000465229 OVCA2Q8WZ82 227 aa17.69■□□□□ 0.42
EXOSC3-203ENST00000465229 FUT8Q9BYC5 575 aa17.69■□□□□ 0.42
EXOSC3-203ENST00000465229 MRPL47Q9HD33 250 aaKnown RBP17.69■□□□□ 0.42
EXOSC3-203ENST00000465229 OSGEPQ9NPF4 335 aa17.69■□□□□ 0.42
EXOSC3-203ENST00000465229 CLDND1Q9NY35 253 aa17.69■□□□□ 0.42
EXOSC3-203ENST00000465229 CTTNBP2NLQ9P2B4 639 aa17.69■□□□□ 0.42
EXOSC3-203ENST00000465229 TTC7AQ9ULT0 858 aaPredicted RBP17.69■□□□□ 0.42
EXOSC3-203ENST00000465229 COG5Q9UP83 839 aa17.69■□□□□ 0.42
EXOSC3-203ENST00000465229 SCINQ9Y6U3 715 aa17.69■□□□□ 0.42
EXOSC3-203ENST00000465229 GREB1Q4ZG55 1949 aa17.68■□□□□ 0.42
EXOSC3-203ENST00000465229 PRUNE2Q8WUY3 3088 aa17.68■□□□□ 0.42
EXOSC3-203ENST00000465229 DOCK6Q96HP0 2047 aa17.68■□□□□ 0.42
EXOSC3-203ENST00000465229 ZNF840PA6NDX5 716 aa17.68■□□□□ 0.42
EXOSC3-203ENST00000465229 TMEM191CA6NGB0 347 aa17.68■□□□□ 0.42
EXOSC3-203ENST00000465229 MAP2K7O14733 419 aa17.68■□□□□ 0.42
EXOSC3-203ENST00000465229 HSF2BPO75031 334 aa17.68■□□□□ 0.42
EXOSC3-203ENST00000465229 SEC31AO94979 1220 aaKnown RBP17.68■□□□□ 0.42
EXOSC3-203ENST00000465229 LTFP02788 710 aa17.68■□□□□ 0.42
EXOSC3-203ENST00000465229 SRGAP2BP0DMP2 458 aa17.68■□□□□ 0.42
EXOSC3-203ENST00000465229 HOXB8P17481 243 aaPredicted RBP17.68■□□□□ 0.42
EXOSC3-203ENST00000465229 LTBRP36941 435 aa17.68■□□□□ 0.42
EXOSC3-203ENST00000465229 EPHA5P54756 1037 aa17.68■□□□□ 0.42
EXOSC3-203ENST00000465229 RARS2Q5T160 578 aaKnown RBP17.68■□□□□ 0.42
EXOSC3-203ENST00000465229 DCUN1D2Q6PH85 259 aa17.68■□□□□ 0.42
EXOSC3-203ENST00000465229 GAREM2Q75VX8 874 aa17.68■□□□□ 0.42
EXOSC3-203ENST00000465229 ARCQ7LC44 396 aa17.68■□□□□ 0.42
EXOSC3-203ENST00000465229 RASGEF1CQ8N431 466 aa17.68■□□□□ 0.42
EXOSC3-203ENST00000465229 EMC1Q8N766 993 aa17.68■□□□□ 0.42
EXOSC3-203ENST00000465229 SMG7Q92540 1137 aaKnown RBP17.68■□□□□ 0.42
EXOSC3-203ENST00000465229 APOL5Q9BWW9 433 aa17.68■□□□□ 0.42
EXOSC3-203ENST00000465229 TRIM7Q9C029 511 aa17.68■□□□□ 0.42
EXOSC3-203ENST00000465229 ASAH2Q9NR71 780 aa17.68■□□□□ 0.42
EXOSC3-203ENST00000465229 TLR8Q9NR97 1041 aaKnown RBP17.68■□□□□ 0.42
EXOSC3-203ENST00000465229 UVRAGQ9P2Y5 699 aa17.68■□□□□ 0.42
EXOSC3-203ENST00000465229 PACSIN2Q9UNF0 486 aaPredicted RBP17.68■□□□□ 0.42
EXOSC3-203ENST00000465229 TBX10O75333 385 aa17.67■□□□□ 0.42
EXOSC3-203ENST00000465229 RHOP08100 348 aa17.67■□□□□ 0.42
EXOSC3-203ENST00000465229 GABRR2P28476 465 aa17.67■□□□□ 0.42
EXOSC3-203ENST00000465229 FLT3P36888 993 aa17.67■□□□□ 0.42
EXOSC3-203ENST00000465229 CLUL1Q15846 466 aa17.67■□□□□ 0.42
EXOSC3-203ENST00000465229 SNX30Q5VWJ9 437 aa17.67■□□□□ 0.42
EXOSC3-203ENST00000465229 TRNP1Q6NT89 227 aa17.67■□□□□ 0.42
EXOSC3-203ENST00000465229 HDXQ7Z353 690 aa17.67■□□□□ 0.42
EXOSC3-203ENST00000465229 GRASPQ7Z6J2 395 aaPredicted RBP17.67■□□□□ 0.42
EXOSC3-203ENST00000465229 ARHGAP18Q8N392 663 aa17.67■□□□□ 0.42
EXOSC3-203ENST00000465229 PDZD8Q8NEN9 1154 aa17.67■□□□□ 0.42
EXOSC3-203ENST00000465229 EDEM1Q92611 657 aa17.67■□□□□ 0.42
EXOSC3-203ENST00000465229 PABPC5Q96DU9 382 aaKnown RBP17.67■□□□□ 0.42
EXOSC3-203ENST00000465229 MS4A14Q96JA4 679 aa17.67■□□□□ 0.42
EXOSC3-203ENST00000465229 MCEEQ96PE7 176 aa17.67■□□□□ 0.42
EXOSC3-203ENST00000465229 SLC2A13Q96QE2 648 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms