RNA–Protein interactions for RNA: ENST00000465213.1

VPS8-217, Transcript of VPS8, CORVET complex subunit, human

TSL 5

Gene VPS8, Length 656 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS8-217	ENST00000465213	FRS3	O43559	492 aa		4.9	□□□□□ -1.63
VPS8-217	ENST00000465213	ONECUT2	O95948	504 aa		4.9	□□□□□ -1.63
VPS8-217	ENST00000465213	FES	P07332	822 aa		4.9	□□□□□ -1.63
VPS8-217	ENST00000465213	NDUFB7	P17568	137 aa		4.9	□□□□□ -1.63
VPS8-217	ENST00000465213	KCNA3	P22001	575 aa		4.9	□□□□□ -1.63
VPS8-217	ENST00000465213	CYP2C18	P33260	490 aa		4.9	□□□□□ -1.63
VPS8-217	ENST00000465213	HOXD12	P35452	270 aa		4.9	□□□□□ -1.63
VPS8-217	ENST00000465213	CHKA	P35790	457 aa		4.9	□□□□□ -1.63
VPS8-217	ENST00000465213	UBA7	P41226	1012 aa		4.9	□□□□□ -1.63
VPS8-217	ENST00000465213	CLNS1A	P54105	237 aa	Known RBP	4.9	□□□□□ -1.63
VPS8-217	ENST00000465213	NAP1L1	P55209	391 aa	Known RBP	4.9	□□□□□ -1.63
VPS8-217	ENST00000465213	SUMO3	P55854	103 aa	Predicted RBP	4.9	□□□□□ -1.63
VPS8-217	ENST00000465213	SLC10A2	Q12908	348 aa	Predicted RBP	4.9	□□□□□ -1.63
VPS8-217	ENST00000465213	G3BP1	Q13283	466 aa	Known RBP eCLIP	4.9	□□□□□ -1.63
VPS8-217	ENST00000465213	IFIT5	Q13325	482 aa	Known RBP	4.9	□□□□□ -1.63
VPS8-217	ENST00000465213	SMC1A	Q14683	1233 aa	Known RBP	4.9	□□□□□ -1.63
VPS8-217	ENST00000465213	PLA1A	Q53H76	456 aa		4.9	□□□□□ -1.63
VPS8-217	ENST00000465213	CCDC158	Q5M9N0	1113 aa		4.9	□□□□□ -1.63
VPS8-217	ENST00000465213	DCAF12L1	Q5VU92	463 aa		4.9	□□□□□ -1.63
VPS8-217	ENST00000465213	C11orf87	Q6NUJ2	197 aa		4.9	□□□□□ -1.63
VPS8-217	ENST00000465213	ANKRD16	Q6P6B7	361 aa		4.9	□□□□□ -1.63
VPS8-217	ENST00000465213	CYP26C1	Q6V0L0	522 aa		4.9	□□□□□ -1.63
VPS8-217	ENST00000465213	GALNT5	Q7Z7M9	940 aa		4.9	□□□□□ -1.63
VPS8-217	ENST00000465213	TBC1D1	Q86TI0	1168 aa	Predicted RBP	4.9	□□□□□ -1.63
VPS8-217	ENST00000465213	SNX32	Q86XE0	403 aa		4.9	□□□□□ -1.63
VPS8-217	ENST00000465213	MICU3	Q86XE3	530 aa		4.9	□□□□□ -1.63
VPS8-217	ENST00000465213	BRSK2	Q8IWQ3	736 aa		4.9	□□□□□ -1.63
VPS8-217	ENST00000465213	SLC15A3	Q8IY34	581 aa		4.9	□□□□□ -1.63
VPS8-217	ENST00000465213	MPP5	Q8N3R9	675 aa		4.9	□□□□□ -1.63
VPS8-217	ENST00000465213	LSMEM1	Q8N8F7	131 aa		4.9	□□□□□ -1.63
VPS8-217	ENST00000465213	SEMA6D	Q8NFY4	1073 aa		4.9	□□□□□ -1.63
VPS8-217	ENST00000465213	RAPGEF4	Q8WZA2	1011 aa		4.9	□□□□□ -1.63
VPS8-217	ENST00000465213	SUCLG2	Q96I99	432 aa		4.9	□□□□□ -1.63
VPS8-217	ENST00000465213	CRB3	Q9BUF7	120 aa		4.9	□□□□□ -1.63
VPS8-217	ENST00000465213	ZNF518B	Q9C0D4	1074 aa		4.9	□□□□□ -1.63
VPS8-217	ENST00000465213	PRKRIP1	Q9H875	184 aa	Predicted RBP	4.9	□□□□□ -1.63
VPS8-217	ENST00000465213	GLOD4	Q9HC38	313 aa		4.9	□□□□□ -1.63
VPS8-217	ENST00000465213	SMC4	Q9NTJ3	1288 aa		4.9	□□□□□ -1.63
VPS8-217	ENST00000465213	ARGLU1	Q9NWB6	273 aa	Predicted RBP	4.9	□□□□□ -1.63
VPS8-217	ENST00000465213	RRN3	Q9NYV6	651 aa		4.9	□□□□□ -1.63
VPS8-217	ENST00000465213	CACNA1I	Q9P0X4	2223 aa		4.9	□□□□□ -1.63
VPS8-217	ENST00000465213	TRIM43B	A6NCK2	446 aa		4.89	□□□□□ -1.63
VPS8-217	ENST00000465213	ISM1	B1AKI9	464 aa		4.89	□□□□□ -1.63
VPS8-217	ENST00000465213		H0YIZ8	118 aa		4.89	□□□□□ -1.63
VPS8-217	ENST00000465213		M0R3H8	397 aa		4.89	□□□□□ -1.63
VPS8-217	ENST00000465213	CHL1	O00533	1208 aa		4.89	□□□□□ -1.63
VPS8-217	ENST00000465213	ZNF213	O14771	459 aa		4.89	□□□□□ -1.63
VPS8-217	ENST00000465213	TPP1	O14773	563 aa		4.89	□□□□□ -1.63
VPS8-217	ENST00000465213	ADORA2A	P29274	412 aa		4.89	□□□□□ -1.63
VPS8-217	ENST00000465213	CTNNA1	P35221	906 aa	Known RBP	4.89	□□□□□ -1.63
VPS8-217	ENST00000465213	PDE6C	P51160	858 aa		4.89	□□□□□ -1.63
VPS8-217	ENST00000465213	ZNF131	P52739	623 aa		4.89	□□□□□ -1.63
VPS8-217	ENST00000465213	SATB1	Q01826	763 aa		4.89	□□□□□ -1.63
VPS8-217	ENST00000465213	TFF2	Q03403	129 aa		4.89	□□□□□ -1.63
VPS8-217	ENST00000465213	KRT17	Q04695	432 aa		4.89	□□□□□ -1.63
VPS8-217	ENST00000465213	RAB32	Q13637	225 aa		4.89	□□□□□ -1.63
VPS8-217	ENST00000465213	LY6K	Q17RY6	165 aa		4.89	□□□□□ -1.63
VPS8-217	ENST00000465213	MGAT5B	Q3V5L5	792 aa		4.89	□□□□□ -1.63
VPS8-217	ENST00000465213	TUBB8	Q3ZCM7	444 aa		4.89	□□□□□ -1.63
VPS8-217	ENST00000465213	AARS2	Q5JTZ9	985 aa	Known RBP	4.89	□□□□□ -1.63
VPS8-217	ENST00000465213	DGKK	Q5KSL6	1271 aa		4.89	□□□□□ -1.63
VPS8-217	ENST00000465213	SLC10A5	Q5PT55	438 aa		4.89	□□□□□ -1.63
VPS8-217	ENST00000465213	DEPDC1	Q5TB30	811 aa		4.89	□□□□□ -1.63
VPS8-217	ENST00000465213	DPP9	Q86TI2	863 aa		4.89	□□□□□ -1.63
VPS8-217	ENST00000465213	ANKRD13B	Q86YJ7	626 aa		4.89	□□□□□ -1.63
VPS8-217	ENST00000465213	TEX9	Q8N6V9	391 aa		4.89	□□□□□ -1.63
VPS8-217	ENST00000465213	FAM156A	Q8NDB6	213 aa		4.89	□□□□□ -1.63
VPS8-217	ENST00000465213	OR56A3	Q8NH54	315 aa		4.89	□□□□□ -1.63
VPS8-217	ENST00000465213	USP13	Q92995	863 aa	Predicted RBP	4.89	□□□□□ -1.63
VPS8-217	ENST00000465213	ATP6V1E2	Q96A05	226 aa		4.89	□□□□□ -1.63
VPS8-217	ENST00000465213	TRIM43	Q96BQ3	446 aa	Predicted RBP	4.89	□□□□□ -1.63
VPS8-217	ENST00000465213	R3HDM4	Q96D70	268 aa		4.89	□□□□□ -1.63
VPS8-217	ENST00000465213	REPS1	Q96D71	796 aa		4.89	□□□□□ -1.63
VPS8-217	ENST00000465213	SEC62	Q99442	399 aa	Known RBP	4.89	□□□□□ -1.63
VPS8-217	ENST00000465213	SLC26A6	Q9BXS9	759 aa		4.89	□□□□□ -1.63
VPS8-217	ENST00000465213	BHMT2	Q9H2M3	363 aa		4.89	□□□□□ -1.63
VPS8-217	ENST00000465213	A1CF	Q9NQ94	594 aa	Known RBP	4.89	□□□□□ -1.63
VPS8-217	ENST00000465213	EPS15L1	Q9UBC2	864 aa		4.89	□□□□□ -1.63
VPS8-217	ENST00000465213	SERGEF	Q9UGK8	458 aa		4.89	□□□□□ -1.63
VPS8-217	ENST00000465213	PADI4	Q9UM07	663 aa		4.89	□□□□□ -1.63
VPS8-217	ENST00000465213	TBC1D30	Q9Y2I9	924 aa		4.89	□□□□□ -1.63
VPS8-217	ENST00000465213	TARM1	B6A8C7	271 aa		4.88	□□□□□ -1.63
VPS8-217	ENST00000465213	RASA4B	C9J798	803 aa		4.88	□□□□□ -1.63
VPS8-217	ENST00000465213	RASA4	O43374	803 aa		4.88	□□□□□ -1.63
VPS8-217	ENST00000465213	IDE	P14735	1019 aa		4.88	□□□□□ -1.63
VPS8-217	ENST00000465213	PTGER1	P34995	402 aa		4.88	□□□□□ -1.63
VPS8-217	ENST00000465213	EEFSEC	P57772	596 aa	Known RBP	4.88	□□□□□ -1.63
VPS8-217	ENST00000465213	PLIN5	Q00G26	463 aa		4.88	□□□□□ -1.63
VPS8-217	ENST00000465213	FMO1	Q01740	532 aa		4.88	□□□□□ -1.63
VPS8-217	ENST00000465213	TNFAIP2	Q03169	654 aa		4.88	□□□□□ -1.63
VPS8-217	ENST00000465213	PSMD6	Q15008	389 aa		4.88	□□□□□ -1.63
VPS8-217	ENST00000465213	CNGA2	Q16280	664 aa		4.88	□□□□□ -1.63
VPS8-217	ENST00000465213	PTCHD3	Q3KNS1	767 aa		4.88	□□□□□ -1.63
VPS8-217	ENST00000465213	RNF220	Q5VTB9	566 aa		4.88	□□□□□ -1.63
VPS8-217	ENST00000465213	ZDHHC24	Q6UX98	284 aa		4.88	□□□□□ -1.63
VPS8-217	ENST00000465213	CCDC149	Q6ZUS6	474 aa		4.88	□□□□□ -1.63
VPS8-217	ENST00000465213	WDR53	Q7Z5U6	358 aa	Predicted RBP	4.88	□□□□□ -1.63
VPS8-217	ENST00000465213	ABRA	Q8N0Z2	381 aa		4.88	□□□□□ -1.63
VPS8-217	ENST00000465213	VGLL2	Q8N8G2	317 aa		4.88	□□□□□ -1.63
VPS8-217	ENST00000465213	BPIFB1	Q8TDL5	484 aa		4.88	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms