RNA–Protein interactions for RNA: ENST00000465039.5

LIMD1-203, Transcript of LIM domains containing 1, humanhuman

TSL 5

Gene LIMD1, Length 676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-203ENST00000465039 TMEM221A6NGB7 291 aa14.34□□□□□ -0.11
LIMD1-203ENST00000465039 M0R296 226 aa14.34□□□□□ -0.11
LIMD1-203ENST00000465039 NFATC1O95644 943 aa14.34□□□□□ -0.11
LIMD1-203ENST00000465039 MMEP08473 750 aa14.34□□□□□ -0.11
LIMD1-203ENST00000465039 TPM1P09493 284 aa14.34□□□□□ -0.11
LIMD1-203ENST00000465039 MMP8P22894 467 aa14.34□□□□□ -0.11
LIMD1-203ENST00000465039 HNRNPH3P31942 346 aaKnown RBP14.34□□□□□ -0.11
LIMD1-203ENST00000465039 IFNAR2P48551 515 aa14.34□□□□□ -0.11
LIMD1-203ENST00000465039 PGFP49763 221 aa14.34□□□□□ -0.11
LIMD1-203ENST00000465039 STARD6P59095 220 aa14.34□□□□□ -0.11
LIMD1-203ENST00000465039 MLF2Q15773 248 aaPredicted RBP14.34□□□□□ -0.11
LIMD1-203ENST00000465039 ASIC2Q16515 512 aa14.34□□□□□ -0.11
LIMD1-203ENST00000465039 OLFML1Q6UWY5 402 aa14.34□□□□□ -0.11
LIMD1-203ENST00000465039 ERICH1Q86X53 443 aa14.34□□□□□ -0.11
LIMD1-203ENST00000465039 PHF13Q86YI8 300 aaPredicted RBP14.34□□□□□ -0.11
LIMD1-203ENST00000465039 PASD1Q8IV76 773 aa14.34□□□□□ -0.11
LIMD1-203ENST00000465039 VSTM4Q8IW00 320 aa14.34□□□□□ -0.11
LIMD1-203ENST00000465039 SCUBE3Q8IX30 993 aa14.34□□□□□ -0.11
LIMD1-203ENST00000465039 CPA6Q8N4T0 437 aa14.34□□□□□ -0.11
LIMD1-203ENST00000465039 CSGALNACT1Q8TDX6 532 aa14.34□□□□□ -0.11
LIMD1-203ENST00000465039 C18orf8Q96DM3 657 aa14.34□□□□□ -0.11
LIMD1-203ENST00000465039 SERPINB11Q96P15 392 aa14.34□□□□□ -0.11
LIMD1-203ENST00000465039 AGPAT1Q99943 283 aa14.34□□□□□ -0.11
LIMD1-203ENST00000465039 CFAP97Q9P2B7 532 aa14.34□□□□□ -0.11
LIMD1-203ENST00000465039 WDR35Q9P2L0 1181 aa14.34□□□□□ -0.11
LIMD1-203ENST00000465039 MRPS17Q9Y2R5 130 aaKnown RBP14.34□□□□□ -0.11
LIMD1-203ENST00000465039 SH3BP1Q9Y3L3 701 aa14.34□□□□□ -0.11
LIMD1-203ENST00000465039 GYPCP04921 128 aa14.33□□□□□ -0.12
LIMD1-203ENST00000465039 UNGP13051 313 aaPredicted RBP14.33□□□□□ -0.12
LIMD1-203ENST00000465039 CHRNB2P17787 502 aa14.33□□□□□ -0.12
LIMD1-203ENST00000465039 NSFP46459 744 aaKnown RBP14.33□□□□□ -0.12
LIMD1-203ENST00000465039 NUBP1P53384 320 aa14.33□□□□□ -0.12
LIMD1-203ENST00000465039 ZXDBP98169 803 aa14.33□□□□□ -0.12
LIMD1-203ENST00000465039 NR1H3Q13133 447 aa14.33□□□□□ -0.12
LIMD1-203ENST00000465039 EML3Q32P44 896 aa14.33□□□□□ -0.12
LIMD1-203ENST00000465039 SLC44A4Q53GD3 710 aa14.33□□□□□ -0.12
LIMD1-203ENST00000465039 TMEM31Q5JXX7 168 aa14.33□□□□□ -0.12
LIMD1-203ENST00000465039 TAF3Q5VWG9 929 aa14.33□□□□□ -0.12
LIMD1-203ENST00000465039 NUGGCQ68CJ6 796 aa14.33□□□□□ -0.12
LIMD1-203ENST00000465039 VPS36Q86VN1 386 aa14.33□□□□□ -0.12
LIMD1-203ENST00000465039 SLC20A1Q8WUM9 679 aa14.33□□□□□ -0.12
LIMD1-203ENST00000465039 MRFAP1L1Q96HT8 127 aa14.33□□□□□ -0.12
LIMD1-203ENST00000465039 VCPIP1Q96JH7 1222 aa14.33□□□□□ -0.12
LIMD1-203ENST00000465039 SLC2A13Q96QE2 648 aa14.33□□□□□ -0.12
LIMD1-203ENST00000465039 EPHX3Q9H6B9 360 aa14.33□□□□□ -0.12
LIMD1-203ENST00000465039 GKN1Q9NS71 199 aa14.33□□□□□ -0.12
LIMD1-203ENST00000465039 DUS2Q9NX74 493 aaKnown RBP14.33□□□□□ -0.12
LIMD1-203ENST00000465039 SMPD4Q9NXE4 827 aa14.33□□□□□ -0.12
LIMD1-203ENST00000465039 GREM1O60565 184 aa14.32□□□□□ -0.12
LIMD1-203ENST00000465039 ADH1CP00326 375 aa14.32□□□□□ -0.12
LIMD1-203ENST00000465039 IGLV3-27P01718 113 aa14.32□□□□□ -0.12
LIMD1-203ENST00000465039 ERBB2P04626 1255 aa14.32□□□□□ -0.12
LIMD1-203ENST00000465039 CALB1P05937 261 aa14.32□□□□□ -0.12
LIMD1-203ENST00000465039 GZMAP12544 262 aa14.32□□□□□ -0.12
LIMD1-203ENST00000465039 EIF2DP41214 584 aaKnown RBP14.32□□□□□ -0.12
LIMD1-203ENST00000465039 MAGEA9P43362 315 aa14.32□□□□□ -0.12
LIMD1-203ENST00000465039 CLCN5P51795 746 aa14.32□□□□□ -0.12
LIMD1-203ENST00000465039 SLC6A3Q01959 620 aa14.32□□□□□ -0.12
LIMD1-203ENST00000465039 C1QBPQ07021 282 aaKnown RBP14.32□□□□□ -0.12
LIMD1-203ENST00000465039 RUNX3Q13761 415 aa14.32□□□□□ -0.12
LIMD1-203ENST00000465039 TRIP4Q15650 581 aaPredicted RBP14.32□□□□□ -0.12
LIMD1-203ENST00000465039 CLEC16AQ2KHT3 1053 aa14.32□□□□□ -0.12
LIMD1-203ENST00000465039 NAA35Q5VZE5 725 aa14.32□□□□□ -0.12
LIMD1-203ENST00000465039 Q6ZNB5 142 aa14.32□□□□□ -0.12
LIMD1-203ENST00000465039 SIX5Q8N196 739 aa14.32□□□□□ -0.12
LIMD1-203ENST00000465039 RIN3Q8TB24 985 aa14.32□□□□□ -0.12
LIMD1-203ENST00000465039 AZIN2Q96A70 460 aa14.32□□□□□ -0.12
LIMD1-203ENST00000465039 FAM149B1Q96BN6 582 aa14.32□□□□□ -0.12
LIMD1-203ENST00000465039 DNAJC7Q99615 494 aa14.32□□□□□ -0.12
LIMD1-203ENST00000465039 IER2Q9BTL4 223 aa14.32□□□□□ -0.12
LIMD1-203ENST00000465039 STOML2Q9UJZ1 356 aa14.32□□□□□ -0.12
LIMD1-203ENST00000465039 TLR6Q9Y2C9 796 aa14.32□□□□□ -0.12
LIMD1-203ENST00000465039 PIAS3Q9Y6X2 628 aa14.32□□□□□ -0.12
LIMD1-203ENST00000465039 TICRRQ7Z2Z1 1910 aa14.32□□□□□ -0.12
LIMD1-203ENST00000465039 CAPN9O14815 690 aa14.31□□□□□ -0.12
LIMD1-203ENST00000465039 DAB1O75553 588 aa14.31□□□□□ -0.12
LIMD1-203ENST00000465039 STC2O76061 302 aa14.31□□□□□ -0.12
LIMD1-203ENST00000465039 TBX18O95935 607 aa14.31□□□□□ -0.12
LIMD1-203ENST00000465039 IGLV3-25P01717 112 aa14.31□□□□□ -0.12
LIMD1-203ENST00000465039 SERPING1P05155 500 aa14.31□□□□□ -0.12
LIMD1-203ENST00000465039 FYNP06241 537 aa14.31□□□□□ -0.12
LIMD1-203ENST00000465039 SLC2A3P11169 496 aa14.31□□□□□ -0.12
LIMD1-203ENST00000465039 NCAM1P13591 858 aa14.31□□□□□ -0.12
LIMD1-203ENST00000465039 CTHP32929 405 aa14.31□□□□□ -0.12
LIMD1-203ENST00000465039 CHKAP35790 457 aa14.31□□□□□ -0.12
LIMD1-203ENST00000465039 HARS2P49590 506 aaKnown RBP14.31□□□□□ -0.12
LIMD1-203ENST00000465039 ARID5AQ03989 594 aa14.31□□□□□ -0.12
LIMD1-203ENST00000465039 KLHL30Q0D2K2 578 aa14.31□□□□□ -0.12
LIMD1-203ENST00000465039 EFEMP1Q12805 493 aa14.31□□□□□ -0.12
LIMD1-203ENST00000465039 ACBD5Q5T8D3 534 aaPredicted RBP14.31□□□□□ -0.12
LIMD1-203ENST00000465039 ZNF852Q6ZMS4 543 aa14.31□□□□□ -0.12
LIMD1-203ENST00000465039 HFE2Q6ZVN8 426 aa14.31□□□□□ -0.12
LIMD1-203ENST00000465039 FAM183BPQ6ZVS7 135 aa14.31□□□□□ -0.12
LIMD1-203ENST00000465039 XYLT1Q86Y38 959 aa14.31□□□□□ -0.12
LIMD1-203ENST00000465039 MIB1Q86YT6 1006 aa14.31□□□□□ -0.12
LIMD1-203ENST00000465039 CNGA4Q8IV77 575 aa14.31□□□□□ -0.12
LIMD1-203ENST00000465039 UNC45BQ8IWX7 931 aa14.31□□□□□ -0.12
LIMD1-203ENST00000465039 SUGP1Q8IWZ8 645 aaKnown RBP14.31□□□□□ -0.12
LIMD1-203ENST00000465039 FAM217AQ8IXS0 508 aa14.31□□□□□ -0.12
LIMD1-203ENST00000465039 FBXL6Q8N531 539 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms