RNA–Protein interactions for RNA: ENST00000464078.5

HMGN1-210, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-210ENST00000464078 FOXJ1Q92949 421 aa18.26■□□□□ 0.51
HMGN1-210ENST00000464078 MRGPRX1Q96LB2 322 aa18.26■□□□□ 0.51
HMGN1-210ENST00000464078 LSM7Q9UK45 103 aaKnown RBP18.26■□□□□ 0.51
HMGN1-210ENST00000464078 NFE2L3Q9Y4A8 694 aa18.26■□□□□ 0.51
HMGN1-210ENST00000464078 PVALEFA0A1B0GWK0 134 aa18.25■□□□□ 0.51
HMGN1-210ENST00000464078 LRRIQ3A6PVS8 624 aaPredicted RBP18.25■□□□□ 0.51
HMGN1-210ENST00000464078 CUTAO60888 179 aa18.25■□□□□ 0.51
HMGN1-210ENST00000464078 BEST1O76090 585 aa18.25■□□□□ 0.51
HMGN1-210ENST00000464078 VNN1O95497 513 aa18.25■□□□□ 0.51
HMGN1-210ENST00000464078 C4BPAP04003 597 aaKnown RBP18.25■□□□□ 0.51
HMGN1-210ENST00000464078 P4HA1P13674 534 aa18.25■□□□□ 0.51
HMGN1-210ENST00000464078 CCDC130P13994 396 aa18.25■□□□□ 0.51
HMGN1-210ENST00000464078 ATP5C1P36542 298 aaKnown RBP18.25■□□□□ 0.51
HMGN1-210ENST00000464078 RING1Q06587 406 aa18.25■□□□□ 0.51
HMGN1-210ENST00000464078 SHC4Q6S5L8 630 aa18.25■□□□□ 0.51
HMGN1-210ENST00000464078 LRSAM1Q6UWE0 723 aa18.25■□□□□ 0.51
HMGN1-210ENST00000464078 TOGARAM2Q6ZUX3 1019 aa18.25■□□□□ 0.51
HMGN1-210ENST00000464078 METTL3Q86U44 580 aaKnown RBP18.25■□□□□ 0.51
HMGN1-210ENST00000464078 UNC93AQ86WB7 457 aa18.25■□□□□ 0.51
HMGN1-210ENST00000464078 PROSER1Q86XN7 944 aa18.25■□□□□ 0.51
HMGN1-210ENST00000464078 OR2I1PQ8NGU4 316 aa18.25■□□□□ 0.51
HMGN1-210ENST00000464078 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.25■□□□□ 0.511e-9■■■■■ 62.2
HMGN1-210ENST00000464078 LHX6Q9UPM6 363 aa18.25■□□□□ 0.51
HMGN1-210ENST00000464078 SCML2Q9UQR0 700 aa18.25■□□□□ 0.51
HMGN1-210ENST00000464078 LAMA5O15230 3695 aa18.25■□□□□ 0.51
HMGN1-210ENST00000464078 STX6O43752 255 aa18.24■□□□□ 0.51
HMGN1-210ENST00000464078 YEATS4O95619 227 aa18.24■□□□□ 0.51
HMGN1-210ENST00000464078 TBX18O95935 607 aa18.24■□□□□ 0.51
HMGN1-210ENST00000464078 DGKGP49619 791 aa18.24■□□□□ 0.51
HMGN1-210ENST00000464078 SYCP2LQ5T4T6 812 aa18.24■□□□□ 0.51
HMGN1-210ENST00000464078 Q6ZNB5 142 aa18.24■□□□□ 0.51
HMGN1-210ENST00000464078 CHCHD4Q8N4Q1 142 aa18.24■□□□□ 0.51
HMGN1-210ENST00000464078 TAF4BQ92750 862 aa18.24■□□□□ 0.51
HMGN1-210ENST00000464078 ZDHHC5Q9C0B5 715 aa18.24■□□□□ 0.51
HMGN1-210ENST00000464078 PNPLA8Q9NP80 782 aa18.24■□□□□ 0.51
HMGN1-210ENST00000464078 HMGXB4Q9UGU5 601 aa18.24■□□□□ 0.51
HMGN1-210ENST00000464078 GCN1Q92616 2671 aaKnown RBP18.23■□□□□ 0.51
HMGN1-210ENST00000464078 ASS1P00966 412 aaKnown RBP18.23■□□□□ 0.51
HMGN1-210ENST00000464078 RPN1P04843 607 aaKnown RBP18.23■□□□□ 0.51
HMGN1-210ENST00000464078 CISD3P0C7P0 127 aa18.23■□□□□ 0.51
HMGN1-210ENST00000464078 FAM200BP0CF97 657 aa18.23■□□□□ 0.51
HMGN1-210ENST00000464078 GNSP15586 552 aa18.23■□□□□ 0.51
HMGN1-210ENST00000464078 ZNF132P52740 706 aa18.23■□□□□ 0.51
HMGN1-210ENST00000464078 NDST1P52848 882 aa18.23■□□□□ 0.51
HMGN1-210ENST00000464078 MAP3K7CLP57077 242 aa18.23■□□□□ 0.51
HMGN1-210ENST00000464078 TRIP6Q15654 476 aaKnown RBP18.23■□□□□ 0.51
HMGN1-210ENST00000464078 SGSM1Q2NKQ1 1148 aa18.23■□□□□ 0.51
HMGN1-210ENST00000464078 PLEKHG6Q3KR16 790 aa18.23■□□□□ 0.51
HMGN1-210ENST00000464078 ZACNQ401N2 412 aa18.23■□□□□ 0.51
HMGN1-210ENST00000464078 WDR45BQ5MNZ6 344 aa18.23■□□□□ 0.51
HMGN1-210ENST00000464078 GPRIN1Q7Z2K8 1008 aa18.23■□□□□ 0.51
HMGN1-210ENST00000464078 SLC9A9Q8IVB4 645 aa18.23■□□□□ 0.51
HMGN1-210ENST00000464078 ZNF276Q8N554 614 aa18.23■□□□□ 0.51
HMGN1-210ENST00000464078 ADAMTS14Q8WXS8 1223 aa18.23■□□□□ 0.51
HMGN1-210ENST00000464078 SLC39A2Q9NP94 309 aa18.23■□□□□ 0.51
HMGN1-210ENST00000464078 DMAC2Q9NW81 257 aa18.23■□□□□ 0.51
HMGN1-210ENST00000464078 OSER1Q9NX31 292 aa18.23■□□□□ 0.51
HMGN1-210ENST00000464078 CACNA2D2Q9NY47 1150 aa18.23■□□□□ 0.51
HMGN1-210ENST00000464078 FBXO10Q9UK96 956 aa18.23■□□□□ 0.51
HMGN1-210ENST00000464078 SLC27A6Q9Y2P4 619 aa18.23■□□□□ 0.51
HMGN1-210ENST00000464078 PCDHA5Q9Y5H7 936 aa18.23■□□□□ 0.51
HMGN1-210ENST00000464078 CKAP5Q14008 2032 aa18.22■□□□□ 0.51
HMGN1-210ENST00000464078 HHLA1C9JL84 531 aa18.22■□□□□ 0.51
HMGN1-210ENST00000464078 TAF4O00268 1085 aa18.22■□□□□ 0.51
HMGN1-210ENST00000464078 NPC1O15118 1278 aa18.22■□□□□ 0.51
HMGN1-210ENST00000464078 CYP26A1O43174 497 aa18.22■□□□□ 0.51
HMGN1-210ENST00000464078 NDUFS2O75306 463 aa18.22■□□□□ 0.51
HMGN1-210ENST00000464078 CLSTN1O94985 981 aa18.22■□□□□ 0.51
HMGN1-210ENST00000464078 ASPAP45381 313 aa18.22■□□□□ 0.51
HMGN1-210ENST00000464078 INCA1Q0VD86 236 aa18.22■□□□□ 0.51
HMGN1-210ENST00000464078 ENPP2Q13822 863 aa18.22■□□□□ 0.51
HMGN1-210ENST00000464078 ACAP1Q15027 740 aa18.22■□□□□ 0.51
HMGN1-210ENST00000464078 TPGS1Q6ZTW0 290 aa18.22■□□□□ 0.51
HMGN1-210ENST00000464078 CLEC20AQ6ZU45 233 aa18.22■□□□□ 0.51
HMGN1-210ENST00000464078 NAXDQ8IW45 347 aa18.22■□□□□ 0.51
HMGN1-210ENST00000464078 DNASE2BQ8WZ79 361 aa18.22■□□□□ 0.51
HMGN1-210ENST00000464078 ZNF396Q96N95 335 aaPredicted RBP18.22■□□□□ 0.51
HMGN1-210ENST00000464078 HNRNPABQ99729 332 aaKnown RBP18.22■□□□□ 0.51
HMGN1-210ENST00000464078 CD93Q9NPY3 652 aa18.22■□□□□ 0.51
HMGN1-210ENST00000464078 FAM49BQ9NUQ9 324 aa18.22■□□□□ 0.51
HMGN1-210ENST00000464078 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.22■□□□□ 0.51
HMGN1-210ENST00000464078 USP36Q9P275 1121 aaKnown RBP18.22■□□□□ 0.51
HMGN1-210ENST00000464078 RAD54BQ9Y620 910 aa18.22■□□□□ 0.51
HMGN1-210ENST00000464078 SH3BP5O60239 455 aa18.21■□□□□ 0.51
HMGN1-210ENST00000464078 PENKP01210 267 aaPredicted RBP18.21■□□□□ 0.51
HMGN1-210ENST00000464078 TRIM21P19474 475 aaKnown RBP18.21■□□□□ 0.51
HMGN1-210ENST00000464078 CASP1P29466 404 aa18.21■□□□□ 0.51
HMGN1-210ENST00000464078 CD6P30203 668 aa18.21■□□□□ 0.51
HMGN1-210ENST00000464078 PSEN1P49768 467 aa18.21■□□□□ 0.51
HMGN1-210ENST00000464078 GRIK2Q13002 908 aa18.21■□□□□ 0.51
HMGN1-210ENST00000464078 ORC1Q13415 861 aa18.21■□□□□ 0.51
HMGN1-210ENST00000464078 STARD3Q14849 445 aa18.21■□□□□ 0.51
HMGN1-210ENST00000464078 GLRX5Q86SX6 157 aa18.21■□□□□ 0.51
HMGN1-210ENST00000464078 RGL4Q8IZJ4 473 aa18.21■□□□□ 0.51
HMGN1-210ENST00000464078 C12orf29Q8N999 325 aa18.21■□□□□ 0.51
HMGN1-210ENST00000464078 CADM4Q8NFZ8 388 aa18.21■□□□□ 0.51
HMGN1-210ENST00000464078 ELMO3Q96BJ8 720 aa18.21■□□□□ 0.51
HMGN1-210ENST00000464078 BACH2Q9BYV9 841 aa18.21■□□□□ 0.51
HMGN1-210ENST00000464078 SLC6A17Q9H1V8 727 aa18.21■□□□□ 0.51
HMGN1-210ENST00000464078 BLZF1Q9H2G9 400 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms