RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 NRDE2Q9H7Z3 1164 aa13.34□□□□□ -0.27
VAPB-203ENST00000463370 CWC15Q9P013 229 aaKnown RBP13.34□□□□□ -0.27
VAPB-203ENST00000463370 CDH9Q9ULB4 789 aa13.34□□□□□ -0.27
VAPB-203ENST00000463370 NR2E3Q9Y5X4 410 aa13.34□□□□□ -0.27
VAPB-203ENST00000463370 H7C0C1 242 aa13.33□□□□□ -0.28
VAPB-203ENST00000463370 DAB1O75553 588 aa13.33□□□□□ -0.28
VAPB-203ENST00000463370 USP17L7P0C7H9 530 aa13.33□□□□□ -0.28
VAPB-203ENST00000463370 GOT1P17174 413 aa13.33□□□□□ -0.28
VAPB-203ENST00000463370 RBL1P28749 1068 aa13.33□□□□□ -0.28
VAPB-203ENST00000463370 ATP5OP48047 213 aa13.33□□□□□ -0.28
VAPB-203ENST00000463370 SEC24CP53992 1094 aa13.33□□□□□ -0.28
VAPB-203ENST00000463370 CLLU1OSQ5K130 101 aa13.33□□□□□ -0.28
VAPB-203ENST00000463370 STRADAQ7RTN6 431 aa13.33□□□□□ -0.28
VAPB-203ENST00000463370 BNIPLQ7Z465 357 aa13.33□□□□□ -0.28
VAPB-203ENST00000463370 CCDC13Q8IYE1 715 aa13.33□□□□□ -0.28
VAPB-203ENST00000463370 CYP4X1Q8N118 509 aa13.33□□□□□ -0.28
VAPB-203ENST00000463370 PXYLP1Q8TE99 480 aa13.33□□□□□ -0.28
VAPB-203ENST00000463370 RSPH1Q8WYR4 309 aa13.33□□□□□ -0.28
VAPB-203ENST00000463370 NT5C3BQ969T7 300 aa13.33□□□□□ -0.28
VAPB-203ENST00000463370 CSPG4P5Q96PW8 444 aa13.33□□□□□ -0.28
VAPB-203ENST00000463370 DNAI2Q9GZS0 605 aa13.33□□□□□ -0.28
VAPB-203ENST00000463370 ANLNQ9NQW6 1124 aa13.33□□□□□ -0.28
VAPB-203ENST00000463370 PIGVQ9NUD9 493 aa13.33□□□□□ -0.28
VAPB-203ENST00000463370 SHOC2Q9UQ13 582 aa13.33□□□□□ -0.28
VAPB-203ENST00000463370 MOXD2PA6NHM9 499 aa13.32□□□□□ -0.28
VAPB-203ENST00000463370 I6L893 689 aaPredicted RBP13.32□□□□□ -0.28
VAPB-203ENST00000463370 DDHD2O94830 711 aa13.32□□□□□ -0.28
VAPB-203ENST00000463370 ODC1P11926 461 aa13.32□□□□□ -0.28
VAPB-203ENST00000463370 CREB1P16220 341 aa13.32□□□□□ -0.28
VAPB-203ENST00000463370 VEGFBP49765 207 aa13.32□□□□□ -0.28
VAPB-203ENST00000463370 DAOAP59103 153 aa13.32□□□□□ -0.28
VAPB-203ENST00000463370 NME3Q13232 169 aa13.32□□□□□ -0.28
VAPB-203ENST00000463370 BHLHA9Q7RTU4 235 aa13.32□□□□□ -0.28
VAPB-203ENST00000463370 ANKMY2Q8IV38 441 aa13.32□□□□□ -0.28
VAPB-203ENST00000463370 ZBED8Q8IZ13 594 aa13.32□□□□□ -0.28
VAPB-203ENST00000463370 PGBD4Q96DM1 585 aa13.32□□□□□ -0.28
VAPB-203ENST00000463370 SLC2A13Q96QE2 648 aa13.32□□□□□ -0.28
VAPB-203ENST00000463370 NPY6RQ99463 290 aa13.32□□□□□ -0.28
VAPB-203ENST00000463370 STARD7Q9NQZ5 370 aa13.32□□□□□ -0.28
VAPB-203ENST00000463370 FZD10Q9ULW2 581 aa13.32□□□□□ -0.28
VAPB-203ENST00000463370 USP3Q9Y6I4 520 aa13.32□□□□□ -0.28
VAPB-203ENST00000463370 C9IYK1 514 aa13.32□□□□□ -0.28
VAPB-203ENST00000463370 M0QYT0 321 aa13.32□□□□□ -0.28
VAPB-203ENST00000463370 KCNN4O15554 427 aa13.32□□□□□ -0.28
VAPB-203ENST00000463370 MYCP01106 439 aaPredicted RBP13.32□□□□□ -0.28
VAPB-203ENST00000463370 TGM2P21980 687 aa13.32□□□□□ -0.28
VAPB-203ENST00000463370 AMPD1P23109 780 aa13.32□□□□□ -0.28
VAPB-203ENST00000463370 BDNFP23560 247 aa13.32□□□□□ -0.28
VAPB-203ENST00000463370 BASP1P80723 227 aaKnown RBP13.32□□□□□ -0.28
VAPB-203ENST00000463370 PDIA2Q13087 525 aaKnown RBP13.32□□□□□ -0.28
VAPB-203ENST00000463370 RAB41Q5JT25 222 aa13.32□□□□□ -0.28
VAPB-203ENST00000463370 MFSD5Q6N075 450 aa13.32□□□□□ -0.28
VAPB-203ENST00000463370 PPIL6Q8IXY8 311 aa13.32□□□□□ -0.28
VAPB-203ENST00000463370 SLC43A3Q8NBI5 491 aa13.32□□□□□ -0.28
VAPB-203ENST00000463370 ZNF296Q8WUU4 475 aaPredicted RBP13.32□□□□□ -0.28
VAPB-203ENST00000463370 PKMYT1Q99640 499 aa13.32□□□□□ -0.28
VAPB-203ENST00000463370 RGS18Q9NS28 235 aa13.32□□□□□ -0.28
VAPB-203ENST00000463370 M0QZQ0 153 aa13.31□□□□□ -0.28
VAPB-203ENST00000463370 AGTP01019 485 aa13.31□□□□□ -0.28
VAPB-203ENST00000463370 DESP17661 470 aa13.31□□□□□ -0.28
VAPB-203ENST00000463370 NOS2P35228 1153 aa13.31□□□□□ -0.28
VAPB-203ENST00000463370 FAM171BQ6P995 826 aa13.31□□□□□ -0.28
VAPB-203ENST00000463370 EXOC3L1Q86VI1 746 aa13.31□□□□□ -0.28
VAPB-203ENST00000463370 BCAS4Q8TDM0 211 aa13.31□□□□□ -0.28
VAPB-203ENST00000463370 ROPN1BQ9BZX4 212 aaPredicted RBP13.31□□□□□ -0.28
VAPB-203ENST00000463370 ROPN1Q9HAT0 212 aaPredicted RBP13.31□□□□□ -0.28
VAPB-203ENST00000463370 POPDC2Q9HBU9 364 aa13.31□□□□□ -0.28
VAPB-203ENST00000463370 HMX1Q9NP08 348 aaPredicted RBP13.31□□□□□ -0.28
VAPB-203ENST00000463370 TBK1Q9UHD2 729 aa13.31□□□□□ -0.28
VAPB-203ENST00000463370 ALOX15BO15296 676 aa13.31□□□□□ -0.28
VAPB-203ENST00000463370 PIAS1O75925 651 aa13.31□□□□□ -0.28
VAPB-203ENST00000463370 CYP11A1P05108 521 aa13.31□□□□□ -0.28
VAPB-203ENST00000463370 GCAP28676 217 aa13.31□□□□□ -0.28
VAPB-203ENST00000463370 PCSK1P29120 753 aa13.31□□□□□ -0.28
VAPB-203ENST00000463370 MMP13P45452 471 aa13.31□□□□□ -0.28
VAPB-203ENST00000463370 HIF1AQ16665 826 aa13.31□□□□□ -0.28
VAPB-203ENST00000463370 INTS6LQ5JSJ4 861 aaKnown RBP13.31□□□□□ -0.28
VAPB-203ENST00000463370 FAXCQ5TGI0 409 aa13.31□□□□□ -0.28
VAPB-203ENST00000463370 NCBP2-AS2Q69YL0 99 aa13.31□□□□□ -0.28
VAPB-203ENST00000463370 REM2Q8IYK8 340 aaPredicted RBP13.31□□□□□ -0.28
VAPB-203ENST00000463370 ARFGAP2Q8N6H7 521 aa13.31□□□□□ -0.28
VAPB-203ENST00000463370 SH3TC2Q8TF17 1288 aa13.31□□□□□ -0.28
VAPB-203ENST00000463370 EDEM1Q92611 657 aa13.31□□□□□ -0.28
VAPB-203ENST00000463370 SMARCD1Q96GM5 515 aa13.31□□□□□ -0.28
VAPB-203ENST00000463370 ACBD6Q9BR61 282 aa13.31□□□□□ -0.28
VAPB-203ENST00000463370 FOXP3Q9BZS1 431 aa13.31□□□□□ -0.28
VAPB-203ENST00000463370 UBN1Q9NPG3 1134 aa13.31□□□□□ -0.28
VAPB-203ENST00000463370 PPANQ9NQ55 473 aaKnown RBP13.31□□□□□ -0.28
VAPB-203ENST00000463370 OR4Q2P0C623 313 aa13.3□□□□□ -0.28
VAPB-203ENST00000463370 STIP1P31948 543 aaKnown RBP13.3□□□□□ -0.28
VAPB-203ENST00000463370 GPX6P59796 221 aa13.3□□□□□ -0.28
VAPB-203ENST00000463370 GPNMBQ14956 572 aa13.3□□□□□ -0.28
VAPB-203ENST00000463370 VSIG1Q86XK7 387 aa13.3□□□□□ -0.28
VAPB-203ENST00000463370 SLC7A14Q8TBB6 771 aa13.3□□□□□ -0.28
VAPB-203ENST00000463370 SELENOSQ9BQE4 189 aa13.3□□□□□ -0.28
VAPB-203ENST00000463370 CSNK1G1Q9HCP0 422 aa13.3□□□□□ -0.28
VAPB-203ENST00000463370 DTLQ9NZJ0 730 aa13.3□□□□□ -0.28
VAPB-203ENST00000463370 DNAJB4Q9UDY4 337 aa13.3□□□□□ -0.28
VAPB-203ENST00000463370 XPO7Q9UIA9 1087 aaKnown RBP13.3□□□□□ -0.28
VAPB-203ENST00000463370 PTCH2Q9Y6C5 1203 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms