RNA–Protein interactions for RNA: ENST00000463041.1

PTPRF-210, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 298 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-210ENST00000463041 GADD45BO75293 160 aaPredicted RBP7.65□□□□□ -1.18
PTPRF-210ENST00000463041 TULP3O75386 442 aa7.65□□□□□ -1.18
PTPRF-210ENST00000463041 STC2O76061 302 aa7.65□□□□□ -1.18
PTPRF-210ENST00000463041 EPN2O95208 641 aa7.65□□□□□ -1.18
PTPRF-210ENST00000463041 KLF8O95600 359 aaPredicted RBP7.65□□□□□ -1.18
PTPRF-210ENST00000463041 ZBED1O96006 694 aa7.65□□□□□ -1.18
PTPRF-210ENST00000463041 PAEPP09466 180 aa7.65□□□□□ -1.18
PTPRF-210ENST00000463041 ZNF806P0C7X5 589 aa7.65□□□□□ -1.18
PTPRF-210ENST00000463041 IRF1P10914 325 aa7.65□□□□□ -1.18
PTPRF-210ENST00000463041 CD44P16070 742 aaKnown RBP7.65□□□□□ -1.18
PTPRF-210ENST00000463041 BMP6P22004 513 aa7.65□□□□□ -1.18
PTPRF-210ENST00000463041 CHKAP35790 457 aa7.65□□□□□ -1.18
PTPRF-210ENST00000463041 BCAT1P54687 386 aa7.65□□□□□ -1.18
PTPRF-210ENST00000463041 BYSLQ13895 437 aaKnown RBP7.65□□□□□ -1.18
PTPRF-210ENST00000463041 STILQ15468 1287 aa7.65□□□□□ -1.18
PTPRF-210ENST00000463041 ELF2Q15723 593 aa7.65□□□□□ -1.18
PTPRF-210ENST00000463041 CNGA2Q16280 664 aa7.65□□□□□ -1.18
PTPRF-210ENST00000463041 PLK5Q496M5 336 aa7.65□□□□□ -1.18
PTPRF-210ENST00000463041 CCDC40Q4G0X9 1142 aa7.65□□□□□ -1.18
PTPRF-210ENST00000463041 EMC10Q5UCC4 262 aa7.65□□□□□ -1.18
PTPRF-210ENST00000463041 KLHL10Q6JEL2 608 aa7.65□□□□□ -1.18
PTPRF-210ENST00000463041 LCLAT1Q6UWP7 414 aa7.65□□□□□ -1.18
PTPRF-210ENST00000463041 Q6ZNB5 142 aa7.65□□□□□ -1.18
PTPRF-210ENST00000463041 PRR23CQ6ZRP0 262 aa7.65□□□□□ -1.18
PTPRF-210ENST00000463041 PIGZQ86VD9 579 aa7.65□□□□□ -1.18
PTPRF-210ENST00000463041 C12orf40Q86WS4 652 aa7.65□□□□□ -1.18
PTPRF-210ENST00000463041 PHTF2Q8N3S3 785 aa7.65□□□□□ -1.18
PTPRF-210ENST00000463041 ALLCQ8N6M5 410 aa7.65□□□□□ -1.18
PTPRF-210ENST00000463041 TRIML1Q8N9V2 468 aa7.65□□□□□ -1.18
PTPRF-210ENST00000463041 IL17RCQ8NAC3 791 aa7.65□□□□□ -1.18
PTPRF-210ENST00000463041 TXNDC5Q8NBS9 432 aaKnown RBP7.65□□□□□ -1.18
PTPRF-210ENST00000463041 EHBP1Q8NDI1 1231 aa7.65□□□□□ -1.18
PTPRF-210ENST00000463041 NETO1Q8TDF5 533 aa7.65□□□□□ -1.18
PTPRF-210ENST00000463041 NELFBQ8WX92 580 aa7.65□□□□□ -1.18
PTPRF-210ENST00000463041 CNOT6LQ96LI5 555 aaKnown RBP7.65□□□□□ -1.18
PTPRF-210ENST00000463041 NT5C1BQ96P26 610 aa7.65□□□□□ -1.18
PTPRF-210ENST00000463041 ARID3AQ99856 593 aa7.65□□□□□ -1.18
PTPRF-210ENST00000463041 BBS2Q9BXC9 721 aa7.65□□□□□ -1.18
PTPRF-210ENST00000463041 DUSP15Q9H1R2 295 aaPredicted RBP7.65□□□□□ -1.18
PTPRF-210ENST00000463041 ARRDC1-AS1Q9H2J1 176 aa7.65□□□□□ -1.18
PTPRF-210ENST00000463041 OLA1Q9NTK5 396 aaKnown RBP7.65□□□□□ -1.18
PTPRF-210ENST00000463041 MARK1Q9P0L2 795 aa7.65□□□□□ -1.18
PTPRF-210ENST00000463041 FBXO10Q9UK96 956 aa7.65□□□□□ -1.18
PTPRF-210ENST00000463041 NUDT5Q9UKK9 219 aa7.65□□□□□ -1.18
PTPRF-210ENST00000463041 CDV3Q9UKY7 258 aaKnown RBP7.65□□□□□ -1.18
PTPRF-210ENST00000463041 STRIP2Q9ULQ0 834 aa7.65□□□□□ -1.18
PTPRF-210ENST00000463041 SGK1O00141 431 aa7.64□□□□□ -1.19
PTPRF-210ENST00000463041 SLC30A4O14863 429 aa7.64□□□□□ -1.19
PTPRF-210ENST00000463041 ZBTB24O43167 697 aaPredicted RBP7.64□□□□□ -1.19
PTPRF-210ENST00000463041 CACNG3O60359 315 aa7.64□□□□□ -1.19
PTPRF-210ENST00000463041 CISD3P0C7P0 127 aa7.64□□□□□ -1.19
PTPRF-210ENST00000463041 SETSIPP0DME0 302 aa7.64□□□□□ -1.19
PTPRF-210ENST00000463041 CHRM1P11229 460 aaPredicted RBP7.64□□□□□ -1.19
PTPRF-210ENST00000463041 TYRP14679 529 aa7.64□□□□□ -1.19
PTPRF-210ENST00000463041 CD19P15391 556 aa7.64□□□□□ -1.19
PTPRF-210ENST00000463041 NTSR1P30989 418 aa7.64□□□□□ -1.19
PTPRF-210ENST00000463041 TKTL1P51854 596 aa7.64□□□□□ -1.19
PTPRF-210ENST00000463041 MARSP56192 900 aaKnown RBP7.64□□□□□ -1.19
PTPRF-210ENST00000463041 YWHAGP61981 247 aaKnown RBP eCLIP7.64□□□□□ -1.19
PTPRF-210ENST00000463041 UBE2HP62256 183 aa7.64□□□□□ -1.19
PTPRF-210ENST00000463041 PDE4CQ08493 712 aa7.64□□□□□ -1.19
PTPRF-210ENST00000463041 MESP2Q0VG99 397 aa7.64□□□□□ -1.19
PTPRF-210ENST00000463041 BST2Q10589 180 aaKnown RBP7.64□□□□□ -1.19
PTPRF-210ENST00000463041 EFEMP1Q12805 493 aa7.64□□□□□ -1.19
PTPRF-210ENST00000463041 KCNH2Q12809 1159 aa7.64□□□□□ -1.19
PTPRF-210ENST00000463041 LRMPQ12912 555 aa7.64□□□□□ -1.19
PTPRF-210ENST00000463041 E2F5Q15329 346 aa7.64□□□□□ -1.19
PTPRF-210ENST00000463041 PLA2G2CQ5R387 149 aa7.64□□□□□ -1.19
PTPRF-210ENST00000463041 GRAMD4Q6IC98 578 aa7.64□□□□□ -1.19
PTPRF-210ENST00000463041 SDE2Q6IQ49 451 aa7.64□□□□□ -1.19
PTPRF-210ENST00000463041 TMEM270Q6UE05 265 aa7.64□□□□□ -1.19
PTPRF-210ENST00000463041 TMEM92Q6UXU6 159 aa7.64□□□□□ -1.19
PTPRF-210ENST00000463041 TPGS1Q6ZTW0 290 aa7.64□□□□□ -1.19
PTPRF-210ENST00000463041 RSRC2Q7L4I2 434 aaKnown RBP7.64□□□□□ -1.19
PTPRF-210ENST00000463041 TTC30AQ86WT1 665 aa7.64□□□□□ -1.19
PTPRF-210ENST00000463041 MIB1Q86YT6 1006 aa7.64□□□□□ -1.19
PTPRF-210ENST00000463041 TRIM59Q8IWR1 403 aa7.64□□□□□ -1.19
PTPRF-210ENST00000463041 SCML4Q8N228 414 aa7.64□□□□□ -1.19
PTPRF-210ENST00000463041 UBR7Q8N806 425 aa7.64□□□□□ -1.19
PTPRF-210ENST00000463041 ZNF513Q8N8E2 541 aaPredicted RBP7.64□□□□□ -1.19
PTPRF-210ENST00000463041 TERB1Q8NA31 727 aa7.64□□□□□ -1.19
PTPRF-210ENST00000463041 OLIG1Q8TAK6 271 aa7.64□□□□□ -1.19
PTPRF-210ENST00000463041 LMO3Q8TAP4 145 aa7.64□□□□□ -1.19
PTPRF-210ENST00000463041 KCTD13Q8WZ19 329 aa7.64□□□□□ -1.19
PTPRF-210ENST00000463041 SRRTQ9BXP5 876 aaKnown RBP7.64□□□□□ -1.19
PTPRF-210ENST00000463041 LRRC4Q9HBW1 653 aa7.64□□□□□ -1.19
PTPRF-210ENST00000463041 VPS45Q9NRW7 570 aa7.64□□□□□ -1.19
PTPRF-210ENST00000463041 DNAJC17Q9NVM6 304 aaKnown RBP7.64□□□□□ -1.19
PTPRF-210ENST00000463041 MARCH2Q9P0N8 246 aa7.64□□□□□ -1.19
PTPRF-210ENST00000463041 KIAA1468Q9P260 1216 aa7.64□□□□□ -1.19
PTPRF-210ENST00000463041 TSPAN16Q9UKR8 245 aa7.64□□□□□ -1.19
PTPRF-210ENST00000463041 PCDHB4Q9Y5E5 795 aa7.64□□□□□ -1.19
PTPRF-210ENST00000463041 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.64□□□□□ -1.19
PTPRF-210ENST00000463041 KNL1Q8NG31 2342 aa7.64□□□□□ -1.19
PTPRF-210ENST00000463041 PLXND1Q9Y4D7 1925 aa7.64□□□□□ -1.19
PTPRF-210ENST00000463041 ASCC3Q8N3C0 2202 aaKnown RBP7.63□□□□□ -1.19
PTPRF-210ENST00000463041 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.63□□□□□ -1.19
PTPRF-210ENST00000463041 SLC12A8A0AV02 714 aa7.63□□□□□ -1.19
PTPRF-210ENST00000463041 BCLAF3A2AJT9 711 aaKnown RBP7.63□□□□□ -1.19
PTPRF-210ENST00000463041 ANTXRLA6NF34 631 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms