RNA–Protein interactions for RNA: ENST00000463013.1

KDM3A-208, Transcript of lysine demethylase 3A, humanhuman

TSL 3

Gene KDM3A, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-208ENST00000463013 CCDC28AQ8IWP9 274 aa4.42□□□□□ -1.7
KDM3A-208ENST00000463013 PNPLA1Q8N8W4 532 aa4.42□□□□□ -1.7
KDM3A-208ENST00000463013 MAFAQ8NHW3 353 aaPredicted RBP4.42□□□□□ -1.7
KDM3A-208ENST00000463013 ABHD5Q8WTS1 349 aa4.42□□□□□ -1.7
KDM3A-208ENST00000463013 CCDC17Q96LX7 622 aa4.42□□□□□ -1.7
KDM3A-208ENST00000463013 CCDC138Q96M89 665 aa4.42□□□□□ -1.7
KDM3A-208ENST00000463013 WDR24Q96S15 920 aa4.42□□□□□ -1.7
KDM3A-208ENST00000463013 MYD88Q99836 296 aa4.42□□□□□ -1.7
KDM3A-208ENST00000463013 GDF15Q99988 308 aa4.42□□□□□ -1.7
KDM3A-208ENST00000463013 GAR1Q9NY12 217 aaKnown RBP4.42□□□□□ -1.7
KDM3A-208ENST00000463013 ZMYND8Q9ULU4 1186 aaPredicted RBP4.42□□□□□ -1.7
KDM3A-208ENST00000463013 NDST3O95803 873 aa4.41□□□□□ -1.7
KDM3A-208ENST00000463013 CYP2A6P11509 494 aaPredicted RBP4.41□□□□□ -1.7
KDM3A-208ENST00000463013 EGR1P18146 543 aa4.41□□□□□ -1.7
KDM3A-208ENST00000463013 YY1P25490 414 aa4.41□□□□□ -1.7
KDM3A-208ENST00000463013 TXNL4AP83876 142 aaKnown RBP4.41□□□□□ -1.7
KDM3A-208ENST00000463013 CFHR3Q02985 330 aa4.41□□□□□ -1.7
KDM3A-208ENST00000463013 LARS2Q15031 903 aaKnown RBP4.41□□□□□ -1.7
KDM3A-208ENST00000463013 SLC5A9Q2M3M2 681 aa4.41□□□□□ -1.7
KDM3A-208ENST00000463013 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.41□□□□□ -1.7
KDM3A-208ENST00000463013 RAP1GAP2Q684P5 730 aa4.41□□□□□ -1.7
KDM3A-208ENST00000463013 GRHL2Q6ISB3 625 aa4.41□□□□□ -1.7
KDM3A-208ENST00000463013 TMEM65Q6PI78 240 aa4.41□□□□□ -1.7
KDM3A-208ENST00000463013 C12orf76Q8N812 135 aaPredicted RBP4.41□□□□□ -1.7
KDM3A-208ENST00000463013 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.41□□□□□ -1.7
KDM3A-208ENST00000463013 C9orf106Q8NAJ2 232 aa4.41□□□□□ -1.7
KDM3A-208ENST00000463013 C8orf58Q8NAV2 365 aa4.41□□□□□ -1.7
KDM3A-208ENST00000463013 EDC3Q96F86 508 aaKnown RBP4.41□□□□□ -1.7
KDM3A-208ENST00000463013 TNIP3Q96KP6 325 aa4.41□□□□□ -1.7
KDM3A-208ENST00000463013 PCDHAC1Q9H158 963 aa4.41□□□□□ -1.7
KDM3A-208ENST00000463013 CERS4Q9HA82 394 aa4.41□□□□□ -1.7
KDM3A-208ENST00000463013 RGL1Q9NZL6 768 aa4.41□□□□□ -1.7
KDM3A-208ENST00000463013 RNF7Q9UBF6 113 aa4.41□□□□□ -1.7
KDM3A-208ENST00000463013 FAM234BA2RU67 622 aa4.4□□□□□ -1.71
KDM3A-208ENST00000463013 H3BNC9 293 aa4.4□□□□□ -1.71
KDM3A-208ENST00000463013 PPP6CO00743 305 aa4.4□□□□□ -1.71
KDM3A-208ENST00000463013 CA12O43570 354 aa4.4□□□□□ -1.71
KDM3A-208ENST00000463013 PLIN1O60240 522 aa4.4□□□□□ -1.71
KDM3A-208ENST00000463013 CBFA2T3O75081 653 aa4.4□□□□□ -1.71
KDM3A-208ENST00000463013 TUBB4AP04350 444 aa4.4□□□□□ -1.71
KDM3A-208ENST00000463013 CYP2D6P10635 497 aa4.4□□□□□ -1.71
KDM3A-208ENST00000463013 EEF1GP26641 437 aaKnown RBP4.4□□□□□ -1.71
KDM3A-208ENST00000463013 EPHB2P29323 1055 aa4.4□□□□□ -1.71
KDM3A-208ENST00000463013 GPC5P78333 572 aa4.4□□□□□ -1.71
KDM3A-208ENST00000463013 EZH2Q15910 746 aaKnown RBP4.4□□□□□ -1.71
KDM3A-208ENST00000463013 AASDHQ4L235 1098 aaPredicted RBP4.4□□□□□ -1.71
KDM3A-208ENST00000463013 CEP78Q5JTW2 689 aa4.4□□□□□ -1.71
KDM3A-208ENST00000463013 DCDC5Q6ZRR9 648 aa4.4□□□□□ -1.71
KDM3A-208ENST00000463013 P3H2Q8IVL5 708 aa4.4□□□□□ -1.71
KDM3A-208ENST00000463013 ZNF366Q8N895 744 aa4.4□□□□□ -1.71
KDM3A-208ENST00000463013 GLIS1Q8NBF1 620 aa4.4□□□□□ -1.71
KDM3A-208ENST00000463013 ZNF566Q969W8 418 aa4.4□□□□□ -1.71
KDM3A-208ENST00000463013 SGCZQ96LD1 299 aa4.4□□□□□ -1.71
KDM3A-208ENST00000463013 C5orf34Q96MH7 638 aa4.4□□□□□ -1.71
KDM3A-208ENST00000463013 HS6ST2Q96MM7 605 aa4.4□□□□□ -1.71
KDM3A-208ENST00000463013 CINPQ9BW66 212 aaPredicted RBP4.4□□□□□ -1.71
KDM3A-208ENST00000463013 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.4□□□□□ -1.715e-6■■□□□ 11.5
KDM3A-208ENST00000463013 FNIP2Q9P278 1114 aa4.4□□□□□ -1.71
KDM3A-208ENST00000463013 CEP83Q9Y592 693 aa4.4□□□□□ -1.71
KDM3A-208ENST00000463013 OR2W5A6NFC9 320 aa4.39□□□□□ -1.71
KDM3A-208ENST00000463013 TMEM232C9JQI7 657 aa4.39□□□□□ -1.71
KDM3A-208ENST00000463013 PECAM1P16284 738 aaPredicted RBP4.39□□□□□ -1.71
KDM3A-208ENST00000463013 ATF7P17544 494 aaPredicted RBP4.39□□□□□ -1.71
KDM3A-208ENST00000463013 MPGP29372 298 aa4.39□□□□□ -1.71
KDM3A-208ENST00000463013 PBX1P40424 430 aa4.39□□□□□ -1.71
KDM3A-208ENST00000463013 ABCG1P45844 678 aa4.39□□□□□ -1.71
KDM3A-208ENST00000463013 DGKQP52824 942 aa4.39□□□□□ -1.71
KDM3A-208ENST00000463013 DNASE1L3Q13609 305 aa4.39□□□□□ -1.71
KDM3A-208ENST00000463013 ATP1A4Q13733 1029 aa4.39□□□□□ -1.71
KDM3A-208ENST00000463013 KCNJ12Q14500 433 aa4.39□□□□□ -1.71
KDM3A-208ENST00000463013 KCNB1Q14721 858 aa4.39□□□□□ -1.71
KDM3A-208ENST00000463013 MFSD13AQ14CX5 517 aa4.39□□□□□ -1.71
KDM3A-208ENST00000463013 SRSF7Q16629 238 aaKnown RBP eCLIP4.39□□□□□ -1.71
KDM3A-208ENST00000463013 MAPKAPK3Q16644 382 aa4.39□□□□□ -1.71
KDM3A-208ENST00000463013 FBXO38Q6PIJ6 1188 aa4.39□□□□□ -1.71
KDM3A-208ENST00000463013 VSTM1Q6UX27 236 aa4.39□□□□□ -1.71
KDM3A-208ENST00000463013 NEK8Q86SG6 692 aa4.39□□□□□ -1.71
KDM3A-208ENST00000463013 SRLQ86TD4 932 aa4.39□□□□□ -1.71
KDM3A-208ENST00000463013 CCDC146Q8IYE0 955 aa4.39□□□□□ -1.71
KDM3A-208ENST00000463013 FAM186BQ8IYM0 893 aa4.39□□□□□ -1.71
KDM3A-208ENST00000463013 GALNT16Q8N428 558 aa4.39□□□□□ -1.71
KDM3A-208ENST00000463013 FAM71DQ8N9W8 422 aa4.39□□□□□ -1.71
KDM3A-208ENST00000463013 SVIPQ8NHG7 77 aa4.39□□□□□ -1.71
KDM3A-208ENST00000463013 DEPTORQ8TB45 409 aa4.39□□□□□ -1.71
KDM3A-208ENST00000463013 ZNF398Q8TD17 642 aa4.39□□□□□ -1.71
KDM3A-208ENST00000463013 GJA10Q969M2 543 aa4.39□□□□□ -1.71
KDM3A-208ENST00000463013 KAZALD1Q96I82 304 aa4.39□□□□□ -1.71
KDM3A-208ENST00000463013 USP29Q9HBJ7 922 aa4.39□□□□□ -1.71
KDM3A-208ENST00000463013 TMEM8AQ9HCN3 771 aa4.39□□□□□ -1.71
KDM3A-208ENST00000463013 FZD4Q9ULV1 537 aa4.39□□□□□ -1.71
KDM3A-208ENST00000463013 PCDHGB2Q9Y5G2 931 aa4.39□□□□□ -1.71
KDM3A-208ENST00000463013 CLIC1O00299 241 aa4.38□□□□□ -1.71
KDM3A-208ENST00000463013 PODXLO00592 558 aa4.38□□□□□ -1.71
KDM3A-208ENST00000463013 HNRNPDLO14979 420 aaKnown RBP4.38□□□□□ -1.71
KDM3A-208ENST00000463013 ZSCAN9O15535 394 aaPredicted RBP4.38□□□□□ -1.71
KDM3A-208ENST00000463013 PRAMEF2O60811 474 aa4.38□□□□□ -1.71
KDM3A-208ENST00000463013 IFIT2P09913 472 aaKnown RBP4.38□□□□□ -1.71
KDM3A-208ENST00000463013 PRR35P0CG20 571 aa4.38□□□□□ -1.71
KDM3A-208ENST00000463013 TMIGD3P0DMS9 266 aaPredicted RBP4.38□□□□□ -1.71
KDM3A-208ENST00000463013 HSPA7P48741 367 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms