RNA–Protein interactions for RNA: ENST00000463004.5

RBM39-223, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 4,580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-223ENST00000463004 SMARCAL1Q9NZC9 954 aa12.17□□□□□ -0.46
RBM39-223ENST00000463004 USP20Q9Y2K6 914 aa12.17□□□□□ -0.46
RBM39-223ENST00000463004 NR2E3Q9Y5X4 410 aa12.17□□□□□ -0.46
RBM39-223ENST00000463004 TCHHQ07283 1943 aa12.17□□□□□ -0.46
RBM39-223ENST00000463004 TMEM191CA6NGB0 347 aa12.17□□□□□ -0.46
RBM39-223ENST00000463004 GPR25O00155 361 aa12.17□□□□□ -0.46
RBM39-223ENST00000463004 FGF19O95750 216 aa12.17□□□□□ -0.46
RBM39-223ENST00000463004 CALRP27797 417 aaKnown RBP12.17□□□□□ -0.46
RBM39-223ENST00000463004 NPY2RP49146 381 aa12.17□□□□□ -0.46
RBM39-223ENST00000463004 GJA9P57773 515 aa12.17□□□□□ -0.46
RBM39-223ENST00000463004 XRCC4Q13426 336 aa12.17□□□□□ -0.46
RBM39-223ENST00000463004 CDH18Q13634 790 aa12.17□□□□□ -0.46
RBM39-223ENST00000463004 POLD3Q15054 466 aaPredicted RBP12.17□□□□□ -0.46
RBM39-223ENST00000463004 KYNUQ16719 465 aa12.17□□□□□ -0.46
RBM39-223ENST00000463004 FRA10AC1Q70Z53 315 aa12.17□□□□□ -0.46
RBM39-223ENST00000463004 METTL3Q86U44 580 aaKnown RBP12.17□□□□□ -0.46
RBM39-223ENST00000463004 DDX42Q86XP3 938 aaKnown RBP eCLIP12.17□□□□□ -0.462e-6■□□□□ 9.8
RBM39-223ENST00000463004 PDCD6IPQ8WUM4 868 aaKnown RBP12.17□□□□□ -0.46
RBM39-223ENST00000463004 PTPRN2Q92932 1015 aa12.17□□□□□ -0.46
RBM39-223ENST00000463004 FAM167BQ9BTA0 163 aa12.17□□□□□ -0.46
RBM39-223ENST00000463004 FUT8Q9BYC5 575 aa12.17□□□□□ -0.46
RBM39-223ENST00000463004 SENP6Q9GZR1 1112 aaPredicted RBP12.17□□□□□ -0.46
RBM39-223ENST00000463004 RABEP2Q9H5N1 569 aa12.17□□□□□ -0.46
RBM39-223ENST00000463004 TLL2Q9Y6L7 1015 aa12.17□□□□□ -0.46
RBM39-223ENST00000463004 COL5A3P25940 1745 aaPredicted RBP12.17□□□□□ -0.46
RBM39-223ENST00000463004 WNK3Q9BYP7 1800 aa12.16□□□□□ -0.46
RBM39-223ENST00000463004 RARAP10276 462 aa12.16□□□□□ -0.46
RBM39-223ENST00000463004 LAG3P18627 525 aa12.16□□□□□ -0.46
RBM39-223ENST00000463004 MATKP42679 507 aa12.16□□□□□ -0.46
RBM39-223ENST00000463004 MMEL1Q495T6 779 aa12.16□□□□□ -0.46
RBM39-223ENST00000463004 RETSATQ6NUM9 610 aa12.16□□□□□ -0.46
RBM39-223ENST00000463004 MFSD7Q6UXD7 560 aa12.16□□□□□ -0.46
RBM39-223ENST00000463004 PIGZQ86VD9 579 aa12.16□□□□□ -0.46
RBM39-223ENST00000463004 CD99L2Q8TCZ2 262 aa12.16□□□□□ -0.46
RBM39-223ENST00000463004 C2orf15Q8WU43 125 aaKnown RBP12.16□□□□□ -0.46
RBM39-223ENST00000463004 PNKPQ96T60 521 aa12.16□□□□□ -0.46
RBM39-223ENST00000463004 UBE2OQ9C0C9 1292 aaKnown RBP12.16□□□□□ -0.46
RBM39-223ENST00000463004 ENTPD7Q9NQZ7 604 aa12.16□□□□□ -0.46
RBM39-223ENST00000463004 ARHGEF38Q9NXL2 777 aa12.16□□□□□ -0.46
RBM39-223ENST00000463004 WRAP73Q9P2S5 460 aaPredicted RBP12.16□□□□□ -0.46
RBM39-223ENST00000463004 GTF2IRD1Q9UHL9 959 aa12.16□□□□□ -0.46
RBM39-223ENST00000463004 PADI3Q9ULW8 664 aa12.16□□□□□ -0.46
RBM39-223ENST00000463004 HMBSP08397 361 aa12.16□□□□□ -0.46
RBM39-223ENST00000463004 WARSP23381 471 aaKnown RBP12.16□□□□□ -0.46
RBM39-223ENST00000463004 AMPD2Q01433 879 aa12.16□□□□□ -0.46
RBM39-223ENST00000463004 FAM117BQ6P1L5 589 aa12.16□□□□□ -0.46
RBM39-223ENST00000463004 LRRC8DQ7L1W4 858 aa12.16□□□□□ -0.46
RBM39-223ENST00000463004 TMC7Q7Z402 723 aa12.16□□□□□ -0.46
RBM39-223ENST00000463004 IFNLR1Q8IU57 520 aaPredicted RBP12.16□□□□□ -0.46
RBM39-223ENST00000463004 C1orf127Q8N9H9 656 aa12.16□□□□□ -0.46
RBM39-223ENST00000463004 HTATIP2Q9BUP3 242 aa12.16□□□□□ -0.46
RBM39-223ENST00000463004 IGKV6D-21A0A0A0MT36 114 aa12.16□□□□□ -0.46
RBM39-223ENST00000463004 O00370 1275 aa12.16□□□□□ -0.46
RBM39-223ENST00000463004 DDX5P17844 614 aaKnown RBP12.16□□□□□ -0.46
RBM39-223ENST00000463004 EFEMP1Q12805 493 aa12.16□□□□□ -0.46
RBM39-223ENST00000463004 ACCSLQ4AC99 568 aa12.16□□□□□ -0.46
RBM39-223ENST00000463004 MRNIPQ6NTE8 343 aa12.16□□□□□ -0.46
RBM39-223ENST00000463004 DEFB128Q7Z7B8 93 aa12.16□□□□□ -0.46
RBM39-223ENST00000463004 ANKMY2Q8IV38 441 aa12.16□□□□□ -0.46
RBM39-223ENST00000463004 LMNTD2Q8IXW0 634 aa12.16□□□□□ -0.46
RBM39-223ENST00000463004 RASGEF1CQ8N431 466 aa12.16□□□□□ -0.46
RBM39-223ENST00000463004 TGS1Q96RS0 853 aaKnown RBP12.16□□□□□ -0.46
RBM39-223ENST00000463004 DRC3Q9H069 523 aa12.16□□□□□ -0.46
RBM39-223ENST00000463004 WWP1Q9H0M0 922 aa12.16□□□□□ -0.46
RBM39-223ENST00000463004 NXF3Q9H4D5 531 aaKnown RBP12.16□□□□□ -0.46
RBM39-223ENST00000463004 CYP4F11Q9HBI6 524 aa12.16□□□□□ -0.46
RBM39-223ENST00000463004 CHORDC1Q9UHD1 332 aaPredicted RBP12.16□□□□□ -0.46
RBM39-223ENST00000463004 CHMP2BQ9UQN3 213 aa12.16□□□□□ -0.46
RBM39-223ENST00000463004 COL24A1Q17RW2 1714 aa12.16□□□□□ -0.46
RBM39-223ENST00000463004 RALBP11234 206 aa12.16□□□□□ -0.46
RBM39-223ENST00000463004 ACAT1P24752 427 aaKnown RBP12.16□□□□□ -0.46
RBM39-223ENST00000463004 ADSSP30520 456 aa12.16□□□□□ -0.46
RBM39-223ENST00000463004 SLC29A2Q14542 456 aa12.16□□□□□ -0.46
RBM39-223ENST00000463004 PAN2Q504Q3 1202 aaKnown RBP12.16□□□□□ -0.46
RBM39-223ENST00000463004 KCNT1Q5JUK3 1230 aa12.16□□□□□ -0.46
RBM39-223ENST00000463004 PPP1R15BQ5SWA1 713 aa12.16□□□□□ -0.46
RBM39-223ENST00000463004 EFL1Q7Z2Z2 1120 aaKnown RBP12.16□□□□□ -0.46
RBM39-223ENST00000463004 NLRP14Q86W24 1093 aa12.16□□□□□ -0.46
RBM39-223ENST00000463004 KLHL29Q96CT2 875 aa12.16□□□□□ -0.46
RBM39-223ENST00000463004 EPS15L1Q9UBC2 864 aa12.16□□□□□ -0.46
RBM39-223ENST00000463004 PGAP2Q9UHJ9 254 aa12.16□□□□□ -0.46
RBM39-223ENST00000463004 DMGDHQ9UI17 866 aaKnown RBP12.16□□□□□ -0.46
RBM39-223ENST00000463004 H0Y626 953 aa12.15□□□□□ -0.46
RBM39-223ENST00000463004 H2AFYO75367 372 aaKnown RBP12.15□□□□□ -0.46
RBM39-223ENST00000463004 SLC4A1P02730 911 aa12.15□□□□□ -0.46
RBM39-223ENST00000463004 CYP1A1P04798 512 aaPredicted RBP12.15□□□□□ -0.46
RBM39-223ENST00000463004 UGT3A1Q6NUS8 523 aa12.15□□□□□ -0.46
RBM39-223ENST00000463004 NECAB2Q7Z6G3 386 aa12.15□□□□□ -0.46
RBM39-223ENST00000463004 SCUBE3Q8IX30 993 aa12.15□□□□□ -0.46
RBM39-223ENST00000463004 ZSWIM2Q8NEG5 633 aa12.15□□□□□ -0.46
RBM39-223ENST00000463004 HTR3CQ8WXA8 447 aa12.15□□□□□ -0.46
RBM39-223ENST00000463004 RIN2Q8WYP3 895 aaPredicted RBP12.15□□□□□ -0.46
RBM39-223ENST00000463004 DCUN1D1Q96GG9 259 aa12.15□□□□□ -0.46
RBM39-223ENST00000463004 ACBD6Q9BR61 282 aa12.15□□□□□ -0.46
RBM39-223ENST00000463004 ANKZF1Q9H8Y5 726 aa12.15□□□□□ -0.46
RBM39-223ENST00000463004 MRPL17Q9NRX2 175 aaKnown RBP12.15□□□□□ -0.46
RBM39-223ENST00000463004 NEMP1O14524 444 aa12.15□□□□□ -0.46
RBM39-223ENST00000463004 NDUFS3O75489 264 aa12.15□□□□□ -0.46
RBM39-223ENST00000463004 TRUB2O95900 331 aaKnown RBP12.15□□□□□ -0.46
RBM39-223ENST00000463004 ITGAVP06756 1048 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms